Query= MSMg01no545_n18.b1 MSMg01no545_n18.b1 CHROMAT_FILE:
MSMg01no545_n18.b1 PHD_FILE: MSMg01no545_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:57 2005
(700 letters)
>mm_chr7_90069103_90070202
Length = 1100
Score = 1295 bits (670), Expect = 0.0
Identities = 689/696 (98%), Gaps = 3/696 (0%)
Strand = Plus / Plus
Query: 5 gaattcctaatgtatacaggcaattggccggctgtggtggtgcatgccggtagaatttgc 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcctaatgaaaacaggcaattggccggctgtggtggtgcatgccggtagaatttgc 267
Query: 65 tgaaggaggcagaggcaggaggatcacgagtttgaggtcagcctaggctacacatttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgaaggaggcagaggcaggaggatcacgagtttgaggtcagcctaggctacacatttttt 327
Query: 125 ttttttcatcctctgctcctcaccctttcctcatcacacttttggggctggagagatgac 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttttt-catcctctgctcctcaccctttcctcatcacacttttggggctggagagatgac 386
Query: 185 tcagtggttaagagcactgactgctcttccagaggtcctgagttcaaatcccaacaacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcagtggttaagagcactgactgctcttccagaggtcctgagttcaaatcccaacaacca 446
Query: 245 cacggtgggtggctcacaactatctgtaattggatctgataccctcttctggtgtgtcgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cacggtgggtggctcacaactatctgtaattggatctgataccctcttctggtgtgtcgc 506
Query: 305 aggacagctacactctacttacatataatgaataaatggatcttaaaaaaaaaaagaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 507 aggacagctacactctacttacatataatgaataaatggatcttaaaaaaaaa--gaaaa 564
Query: 365 taggcaaattggatgaatgactttaatatacaattaaggcttaaaatttcaattctgtct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taggcaaattggatgaatgactttaatatacaattaaggcttaaaatttcaattctgtct 624
Query: 425 gcaaacagccacattgaccattactggagatgatttgaatcaaaagtttttcatggtatg 484
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 gcaaacagccacattgaccattactggagatgatttgaataaaaagtttttcatggtatg 684
Query: 485 gaccagaacttttcatgttttagccaaaatattttagtatatttgtcaatcagaaaatcc 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggccagaacttttcatgttttagccaaaatattttagtatatttgtcaatcagaaaatcc 744
Query: 545 ccaagagagacacttttattttatctaaacacttatatccacattacattatagctttgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccaagagagacacttttattttatctaaacacttatatccacattacattatagctttgt 804
Query: 605 ttcctaaagaaaaaaaaatctgttcaccacctgctcaagaggtgtacaacctggattctc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttcctaaagaaaaaaaaatctgttcaccacctgctcaagaggtgtacaacctggattctc 864
Query: 665 aacgctgttgctaaataatgcactaggactgctcag 700
||||||||||||||||||||||||||||||||||||
Sbjct: 865 aacgctgttgctaaataatgcactaggactgctcag 900
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_n18.g1 MSMg01no545_n18.g1 CHROMAT_FILE:
MSMg01no545_n18.g1 PHD_FILE: MSMg01no545_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:57 2005
(607 letters)
>mm_chr7_90195498_90196504
Length = 1007
Score = 758 bits (392), Expect = 0.0
Identities = 392/392 (100%)
Strand = Plus / Minus
Query: 1 agtggaaggaaaaaaactaaagaaactaacaaaaaaatctatgacagaagcatttccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agtggaaggaaaaaaactaaagaaactaacaaaaaaatctatgacagaagcatttccatg 333
Query: 61 aagatatagatagatgatatagatatagatatgatataattcattattaattcttaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aagatatagatagatgatatagatatagatatgatataattcattattaattcttaaagc 273
Query: 121 atagaaagtgatgggtttcattatgacatttaaaagccttgttataaaaaagtttgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atagaaagtgatgggtttcattatgacatttaaaagccttgttataaaaaagtttgaaaa 213
Query: 181 aaatcacacacagggctggaatgatggctcagtggtaaaaaacacttcctgctcttccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aaatcacacacagggctggaatgatggctcagtggtaaaaaacacttcctgctcttccaa 153
Query: 241 ggacccaagtttgacccccaggctactcatggtggctcacagcagtgtagctccagtccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ggacccaagtttgacccccaggctactcatggtggctcacagcagtgtagctccagtccc 93
Query: 301 agagaatctgaaaccctcttctggtctctgaggacccagcatgtggtacatggacaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 agagaatctgaaaccctcttctggtctctgaggacccagcatgtggtacatggacaggca 33
Query: 361 tgcagtcaaaacatccatacacataaactaat 392
||||||||||||||||||||||||||||||||
Sbjct: 32 tgcagtcaaaacatccatacacataaactaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
