Query= MSMg01no546_a16.b1 MSMg01no546_a16.b1 CHROMAT_FILE:
MSMg01no546_a16.b1 PHD_FILE: MSMg01no546_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:12 2005
(712 letters)
>mm_chr7_30577259_30578370
Length = 1112
Score = 1317 bits (681), Expect = 0.0
Identities = 699/705 (99%)
Strand = Plus / Plus
Query: 8 gaattcaaaggcgtggccccgaagactcccttttggggaaagactttgaatataaaatat 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcaaaggcgtggccccgaagactcccttttggggaaagactttgaatataaaatat 267
Query: 68 ttgaagaacaagagaactctcatagggtatatttcaaacacgtgataaaaaccacctctg 127
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 268 atgaagaacaagagaactctcatagggtatatttcagacacgtgataaaaaccacctctg 327
Query: 128 gaaaaagacctccgtacagaaaacgcacatctgttagtctctatcagaaaactcctaacg 187
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 328 gaaaaagacctcggtacagaaaacgcacacctgttagtctctatcagaaaactcctaacg 387
Query: 188 gagaaaagccctacgaatgtggggagtgtgggaaggctttcaaagtccgccaacaactta 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagaaaagccctacgaatgtggggagtgtgggaaggctttcaaagtccgccaacaactta 447
Query: 248 ctttccatcagaggatccacactggcgagaagccctacgaatgcaaggaatgtggcaaag 307
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctttccatcagaggatccacaccggcgagaagccctacgaatgcaaggaatgtggcaaag 507
Query: 308 ccttccgacagtgcgcccacctcagtcgccatcagaggatccacgcctctgacaagctct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ccttccgacagtgcgcccacctcagtcgccatcagaggatccacgcctctgacaagctct 567
Query: 368 atgaatgtaagaagtgtgcaaagatcttcacgtgtagctcggaccttcgagggcatcaga 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atgaatgtaagaagtgtgcaaagatcttcacgtgtagctcggaccttcgagggcatcaga 627
Query: 428 ggtctcacgtgggcgagaagccctacgattgtaaagagtgcgggaaggcctttcgagtcc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ggtctcacgtgggcgagaagccctacgattgtaaagagtgcgggaaggcctttcgagtcc 687
Query: 488 gtggacagctcatgctccaccagaggatccacaccggtgagaagccctacgcatgcacgg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtggacagctcatgctccaccagaggatccacaccggtgagaagccctacgcatgcacgg 747
Query: 548 agtgcggcaagagcttccggcaggtagcgcacctcactcggcatcagaggctcaacggtg 607
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 748 agtgcggcaagagcttccggcaggtagcgcacctcactcggcatcagaggctcaacagtg 807
Query: 608 gcagctcacgccacgagtgtaaggagtgcggccgggctttcctgtgcagcacgggcctcc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gcagctcacgccacgagtgtaaggagtgcggccgggctttcctgtgcagcacgggcctcc 867
Query: 668 ggctgcatcacaaactgcacacgggagagaaaccctacgactgca 712
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ggctgcatcacaaactgcacacgggagagaaaccctacgactgca 912
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space: 773604
Effective search space used: 773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no546_a16.g1 MSMg01no546_a16.g1 CHROMAT_FILE:
MSMg01no546_a16.g1 PHD_FILE: MSMg01no546_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:12 2005
(536 letters)
>mm_chr7_30731533_30732468
Length = 936
Score = 557 bits (288), Expect = e-163
Identities = 324/338 (95%), Gaps = 4/338 (1%)
Strand = Plus / Minus
Query: 203 atttatttatttgtttattta----atgtgtatgagtacattgttgctatcttcaggcac 258
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 921 atttatttatttgtttatttattttatgtatatgagtacattgttgctatcttcaggcac 862
Query: 259 accagaagagggcatcagatcccattacagatggttgtgaaccaccatgtggttgctggg 318
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 861 tccagaagagggcatcagatcttgttacagatggttgtgaaccacaatgtggttgctggg 802
Query: 319 atttgaactcaggacctctggaagagcagtcagtgctcttaacagctgagccatctctcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atttgaactcaggacctctggaagagcagtcagtgctcttaacagctgagccatctctcc 742
Query: 379 acccctgagccctcgttttaaattggtttataaataagcaaaattgaaagtttagaggtg 438
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 741 acccctgagccctggttttaaattggtatataaataagcaaaattgaaagtttagaagtg 682
Query: 439 aaataaccatacttaccttgctgattttacctattttgaagcatggtatttattttggct 498
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaataaccatacttaccatgctgattttacctattttgaagcatggtatttattttggct 622
Query: 499 catttttatgagctatttcttgtagcggtagttagcct 536
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catttttatgagctatttcttgtagcggtagttagcct 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
