Query= MSMg01no548_n20.b1 MSMg01no548_n20.b1 CHROMAT_FILE:
MSMg01no548_n20.b1 PHD_FILE: MSMg01no548_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:54 2005
(667 letters)
>mm_chr7_14009192_14010259
Length = 1068
Score = 282 bits (146), Expect = 5e-80
Identities = 164/170 (96%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 500 ttaaaactaaccctat-tctgactatggatttcattttaagtgtatgatttttacatata 558
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttaaaactaaccctctgt-tgactatggatttcattttaagtgtatgatttttacatata 810
Query: 559 tgatcatgaatatctgacaccctaattcctgaataagcccatctgagaaag-aaagcctc 617
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Sbjct: 809 tgatcatgaatatctgacaccctaattcctgaataatcccatctgagaaaggaaagcctc 750
Query: 618 tatcccattcatcccatggttcagtttctgtatttaacaatactgcttca 667
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Sbjct: 749 tatcccattcatcccatgtttcagtttctgtatttaacaatactgcttca 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1068
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1058
Effective search space: 695106
Effective search space used: 695106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_n20.g1 MSMg01no548_n20.g1 CHROMAT_FILE:
MSMg01no548_n20.g1 PHD_FILE: MSMg01no548_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:54 2005
(616 letters)
>mm_chr7_13960584_13961599
Length = 1016
Score = 1145 bits (592), Expect = 0.0
Identities = 610/616 (99%)
Strand = Plus / Plus
Query: 1 agtggagatgggaagtggatattgggcaagaatgacctcccagagattctagctctaccc 60
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Sbjct: 201 agtggagatgggaagtggatattgggcaagaatgacctcccagagattctagctctaccc 260
Query: 61 tactccttcattgctaggagaaaaaggagaagtatctgggtttccagaggaacactttaa 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactccttcattactaggagaaaaaggagaagtatctgggtttccagaggaacactttaa 320
Query: 121 gtatctctcaggagctctcttgctggacaaataccatatattagtaaatattagtatatt 180
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Sbjct: 321 gtatctctcaggagctctcttgctggacaaataccatatattagtaaatattagtatatt 380
Query: 181 agtaatttattaaataaattaccatatattagtaaatattagtatattagtaaatattct 240
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Sbjct: 381 agtaatttattaaataaattaccatatattagtaaatattaatatattagtaaatattct 440
Query: 241 ggaacgttcctgaatctaatgttacagcttctgataaacagaattagaatctgtctatgg 300
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ggaacattcctgaatctaatgttacagcttctgataaacagatttagaatctgtctatgg 500
Query: 301 gagttacatgcaatctcacctgcaaaacactagtcagtgataagcatgtgctaggatttc 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gagttacatgcaatctcacctgcaaaacactagttagtgataagcatgtgctaggatttc 560
Query: 361 aagcataattatatatctatgtacttagcaagtaatttttgctgttctttgagcctgggt 420
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Sbjct: 561 aagcataattatatatctatgtacttagcaagtaatttttgctgttctttgagcctgggt 620
Query: 421 ctcatgtattccattttgaccttaaactaaaactgtgtggctgagactagtcttgaactc 480
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Sbjct: 621 ctcatgtattccattttgaccttaaactaaaactgtgtggctgagactagtcttgaactc 680
Query: 481 ttatttcttccatctcccaaatactaggattatagacatacacccccattcctagtcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatttcttccatctcccaaatactaggattatagacatacacccccattcctagtcacc 740
Query: 541 gtataaattccattcccagtcaccatataattttgtgatatactatgaagtccatcatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtataaattccattcccagtcaccatataattttgtgatatactatgaagtccatcatgg 800
Query: 601 atccctccttctgcac 616
|||| |||||||||||
Sbjct: 801 atccttccttctgcac 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
