BAC Information

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BAC

Clone NameB6Ng01-001K13
Chromosome8 (Build37)
Map Location 80,525,652 - 80,526,416
singlet/doubletsinglet
Overlap genenone
Upstream geneNr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
Downstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-001K13.bB6Ng01-001K13.g
ACCDH839916DH839917
length1,249765
definitionDH839916|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K13, 5' end.DH839917|Mus musculus domesticus DNA, BAC clone: B6Ng01-001K13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggctttttaagacaaaagagggtcagctatatccccc
aaggtcaccaaaggcccaccttgccttcactttatttgtcctaaatttct
tgcacaccgatatcaagggccagtctgcagcggatcgccactggcatcca
gttacttctaattcttatgcattggtaaaatggaaggaccccctgactaa
tgaatggaagggtccagatccagttctaatttggggtaggggctcagttt
gtgttttttcacgagatgaagatggagcgcggtggctgccagagagatta
attcgtcagatgaacacagattctgactcttctggtaagtatcattctaa
agactaaaattccttttgtgcttaaaattcagctgagagcaacagctctc
aaagctgtttgtgttctccagctactctctgaaccagctcccgacaggag
gccggagactagcctcagctttacaatttgcatttaaataaagtacctag
acttccccgaaagaagttctgctttcctactttctcactgtctttcaaga
ttttgtctttcaagcaggtaaatcaacattcccgaggcggaccagcggat
gtgcatccccgcccccctagagcacacaggcggcagctgttacccccagt
ctcaggacatttccagcatgtggctttcagtctgagttaaaaatttaggt
ttacctagagggctagaagagtagatttttctatatcaataaagattggt
ttttattttggtagacaggcttagccccttagctgacctctggcttttca
cccttgctgttactgcaaggtgtccttagctcaataggctgtggaaaaac
aggatgaggaggacgacttccagctcctatttacccacaatcgtggtgtt
ataacgacatattctgcttagctttgctaattctgaggttgataattctc
ctttaggagctgcacagcactcagactgtgcatacctggtttgtgattgt
acaaattcagtatgggccccgcttgttgcaagatctttactgcaggaagt
cgctgacattctgagttcttgggaaatacccgctgaaaagtggtaccaat
ttgttaaataaaatttccgcttaccttgcctcctaaggtccaagccaagt
tgtactcggaatcggcctggtccccagccaggttagccactctctcggt
gaattcctcctgcgtgcattctgtcagagttcctgacagaatgtgagctc
cagatgagcagaccttctgtctacttcatttacagatgtgtcccgagtac
ctagaacagtgctcagcactgttctatggatgacagtctgcactctcaga
ggagatccctggtgctcacttggtttgtgccggactgctgctgtcctgtg
ctgtatgtgttggactgttgttcttacgtgtcagagtctgttggagtggg
ttgtgttcttaagatccgtctttatcactgtttgtctagggtttacaggt
ctctgacatctgctctgaacaaaacctctgcctgccttactcagccacac
aggaatgccattgttacattttcttctgctccagtccgttcctggtgcta
ggaatgcctttctgtaatagattccctggcatcatatggtaacgaaaggg
tgctttaaagaatgctaatttaaaccgctctttaacttgcatgttttcag
tgtgggcagtgagggaggaggtttgaagcaagacagctgtgaggtttgcc
tagcagctgaatgctgcatggattagctggctccttcttttctggtagtg
ggtaaccccttaaaggaacatgccctggctggggaaaggcacacctgtgt
gtagccaaagggaagagttttaaagatggggcacagttttctgcaccacc
agctttgcactcaaaaagtgatactgctaagaagtttagaaaaatggggg
tgagatgggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80525652_80526416
seq2: B6Ng01-001K13.g_66_830

seq1  GAATTCCTCCTGCGTGCATTCTGTCAGAGTTCCTGACAGAATGTGAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGCGTGCATTCTGTCAGAGTTCCTGACAGAATGTGAGCTC  50

seq1  CAGATGAGCAGACCTTCTGTCTACTTCATTTACAGATGTGTCCCGAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGCAGACCTTCTGTCTACTTCATTTACAGATGTGTCCCGAGTAC  100

seq1  CTAGAACAGTGCTCAGCACTGTTCTATGGATGACAGTCTGCACTCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACAGTGCTCAGCACTGTTCTATGGATGACAGTCTGCACTCTCAGA  150

seq1  GGAGATCCCTGGTGCTCACTTGGTTTGTGCCGGACTGCTGCTGTCCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCCCTGGTGCTCACTTGGTTTGTGCCGGACTGCTGCTGTCCTGTG  200

seq1  CTGTATGTGTTGGACTGTTGTTCTTACGTGTCAGAGTCTGTTGGAGTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGTTGGACTGTTGTTCTTACGTGTCAGAGTCTGTTGGAGTGGG  250

seq1  TTGTGTTCTTAAGATCCGTCTTTATCACTGTTTGTCTAGGGTTTACAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTTAAGATCCGTCTTTATCACTGTTTGTCTAGGGTTTACAGGT  300

seq1  CTCTGACATCTGCTCTGAACAAAACCTCTGCCTGCCTTACTCAGCCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACATCTGCTCTGAACAAAACCTCTGCCTGCCTTACTCAGCCACAC  350

seq1  AGGAATGCCATTGTTACATTTTCTTCTGCTCCAGTCCGTTCCTGGTGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCCATTGTTACATTTTCTTCTGCTCCAGTCCGTTCCTGGTGCTA  400

seq1  GGAATGCCTTTCTGTAATAGATTCCCTGGCATCATATGGTAACGAAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCTTTCTGTAATAGATTCCCTGGCATCATATGGTAACGAAAGGG  450

seq1  TGCTTTAAAGAATGCTAATTTAAACCGCTCTTTAACTTGCATGTTTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAAGAATGCTAATTTAAACCGCTCTTTAACTTGCATGTTTTCAG  500

seq1  TGTGGGCAGTGAGGGAGGAGGTTTGAAGCAAGACAGCTGTGAGGTTTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCAGTGAGGGAGGAGGTTTGAAGCAAGACAGCTGTGAGGTTTGCC  550

seq1  TAGCAGCTGAATGCTGCATGGATTAGCTGGCTCCTTCTTTTCTGGTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCTGAATGCTGCATGGATTAGCTGGCTCCTTCTTTTCTGGTAGTG  600

seq1  GGTAACCCCTTAAAGGAACATGCCCTGGCTGGGGAAAGGCACACCTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCCCTTAAAGGAACATGCCCTGGCTGGGGAAAGGCACACCTGTGT  650

seq1  GTAGCCAAAGGGAAGAGTTTTAAAGATGGGGCACAGTTTTCTGCACCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAAAGGGAAGAGTTTTAAAGATGGGGCACAGTTTTCTGCACCACC  700

seq1  AGCTTTGCACTCAAAAAGTGATACTGCTAAGAAGTTTAGAAAAATGGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCACTCAAAAAGTGATACTGCTAAGAAGTTTAGAAAAATGGGGG  750

seq1  TGAGATGGGGGTGGG  765
      |||||||||||||||
seq2  TGAGATGGGGGTGGG  765