BAC Information

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BAC

Clone NameB6Ng01-003A11
Chromosome8 (Build37)
Map Location 33,172,534 - 33,208,550
singlet/doubletdoublet
Overlap gene2010007E15Rik
Upstream geneDusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
Downstream geneEG666589, EG546052, LOC100042715, LOC628408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003A11.bB6Ng01-003A11.g
ACCDH840872DH840873
length1,125706
definitionDH840872|Mus musculus domesticus DNA, BAC clone: B6Ng01-003A11, 5' end.DH840873|Mus musculus domesticus DNA, BAC clone: B6Ng01-003A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,207,411 - 33,208,550)(33,172,534 - 33,173,239)
sequence
gaattccaggcttgtccagcctaggctacactaggcagcctctgtctcca
tgtttcacaaaacaaaaacaaagaatgcaacataaccaaggaattctcac
ctaacaactgttaagacctgaccagggtttcatctctaccactgccaggg
tagagggtgtagcacttcagcatggaaatgaggatggggaagacaacagc
tgtcacagagaaaaaaaaatcttaccctacacttgctacaaaattacact
ttttcaaaatgtgtttccattgcaaatgtccttcaatttaaagtgagaaa
agatatccatctatgaaacctttctagagactatcacccaggtggctctt
aagatttcttgtcttggttcagcatcaaggacacatgtttcagtgatatc
tggagatttcgctgcacagtaaaaatttctcttgtgttctacttgcatgg
aattctaagtggatgaaaaatttaaatctgttattttccccaatttgcaa
aggagccaaggtagcatcaactgaggtattaagtctcttggcttgctata
gactgccatgactcaaacattttccaaagtgtgagacatctattatgatc
ccctgtaattactatcttttcctctactgccatgatgagaaaagtcattc
ttgactcaaagatcttgtaacttgttgaaagcagaagaggggctttcaga
tggtgcaattcacgcctggatcacaactagcagataagagaagctttcac
agttcatctacccactttaagtcctaccaggatcaaccttgagcaattag
ctttaaatattgcttttccctctattgtatggtaaatggcagtgggattt
tccagctgctgcctttaaggatggtgatttgaatagataccaggcttgaa
agttgccagagatgcttctagaatggctatatggagtttcagcatctcca
gaaaatcacctggtaacagtgacagctggggtggctgagggtattacttg
tgacagatactggcctatgacacctttttttcatttgagattctcacaga
tgatttgctggtgctaaaccagtgacacatgttctcactgtggtcaatat
cctgtggggtcaaatgccctttcca
gaattccataataaacaacctttgttactttaaaacaatgcatcacctga
tgacagtttcacggttacatatggtgtatttcctcaatgaaatggtgaca
tctagttaacttaacctacttccttctttccttctttccttccttccttt
cttccttccttccttccttccttccttccttccttccttcctttcttcct
tcctttccacctctcccttctctgtcctattcacttccaaagtatttctt
ctgtgtatgctgtgagtccatcattagggatataaaataagacataccta
gcctttgaggagctcatgctatgaagaaagcaagcctgcaggcacacaga
caactaaggaatgagggatctgaagcaaaaacagaatatacataatgcct
ggagaagctttaggaaggactcaactgtgatttcatgaaaactagcaaag
tcaatggcaaagtcacaatcacgtcgagtcttacggaatgaatgtaagct
tatttgtagtgaaggaaagcgagaacaaatgccaaacagagcaagagaaa
aggtgtcataggcagagaatcccaaatacataagacacccaagacaattg
gcagcttggtgagatggtgcatatctacaatcccagaatttaggaggtca
tagcaagaagtcagattgggttatattaagaggaggagtaggaggggagg
aggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33207411_33208550
seq2: B6Ng01-003A11.b_48_1172 (reverse)

seq1  TGGAAAGGGCATTTGACCCCCACAGGGATATTGACCCACAGGTTGAGAAC  50
      |||||||||||||||| ||||||| ||||||||| ||||||  |||||||
seq2  TGGAAAGGGCATTTGA-CCCCACA-GGATATTGA-CCACAG--TGAGAAC  45

seq1  ATGTGTCCACTGGTTTAGCACAAGGCAAATCATCTGTGAGGAATCTTCAA  100
      |||||| |||||||||||||| | ||||||||||||||| ||||||   |
seq2  ATGTGT-CACTGGTTTAGCACCA-GCAAATCATCTGTGA-GAATCT--CA  90

seq1  AATGAAAAAAAGGTGTCATTAGGGCCAGTATCTGTCAACAAGTAATACCC  150
      |||||||||||||||||||   |||||||||||||| |||||||||| ||
seq2  AATGAAAAAAAGGTGTCAT--AGGCCAGTATCTGTC-ACAAGTAATA-CC  136

seq1  CTCAGCCACCCCAGCCTGTCACTGTTACCAGGTGATTTTCTGGAGATGCT  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCAGCCACCCCAG-CTGTCACTGTTACCAGGTGATTTTCTGGAGATGCT  185

seq1  GAAACTCCATATAGCCATTCTAGAAGCATCTCTGGCAACTTTCAAGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCATATAGCCATTCTAGAAGCATCTCTGGCAACTTTCAAGCCTG  235

seq1  GTATCTATTCAAATCACCATCCTTAAAGGCAGCAGCTGGAAAATCCCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTATTCAAATCACCATCCTTAAAGGCAGCAGCTGGAAAATCCCACT  285

seq1  GCCATTTACCATACAATAGAGGGAAAAGCAATATTTAAAGCTAATTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTACCATACAATAGAGGGAAAAGCAATATTTAAAGCTAATTGCTC  335

seq1  AAGGTTGATCCTGGTAGGACTTAAAGTGGGTAGATGAACTGTGAAAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGATCCTGGTAGGACTTAAAGTGGGTAGATGAACTGTGAAAGCTT  385

seq1  CTCTTATCTGCTAGTTGTGATCCAGGCGTGAATTGCACCATCTGAAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCTGCTAGTTGTGATCCAGGCGTGAATTGCACCATCTGAAAGCC  435

seq1  CCTCTTCTGCTTTCAACAAGTTACAAGATCTTTGAGTCAAGAATGACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTGCTTTCAACAAGTTACAAGATCTTTGAGTCAAGAATGACTTT  485

seq1  TCTCATCATGGCAGTAGAGGAAAAGATAGTAATTACAGGGGATCATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCATGGCAGTAGAGGAAAAGATAGTAATTACAGGGGATCATAATA  535

seq1  GATGTCTCACACTTTGGAAAATGTTTGAGTCATGGCAGTCTATAGCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTCACACTTTGGAAAATGTTTGAGTCATGGCAGTCTATAGCAAGC  585

seq1  CAAGAGACTTAATACCTCAGTTGATGCTACCTTGGCTCCTTTGCAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACTTAATACCTCAGTTGATGCTACCTTGGCTCCTTTGCAAATTG  635

seq1  GGGAAAATAACAGATTTAAATTTTTCATCCACTTAGAATTCCATGCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATAACAGATTTAAATTTTTCATCCACTTAGAATTCCATGCAAGT  685

seq1  AGAACACAAGAGAAATTTTTACTGTGCAGCGAAATCTCCAGATATCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAAGAGAAATTTTTACTGTGCAGCGAAATCTCCAGATATCACTG  735

seq1  AAACATGTGTCCTTGATGCTGAACCAAGACAAGAAATCTTAAGAGCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTGTCCTTGATGCTGAACCAAGACAAGAAATCTTAAGAGCCACC  785

seq1  TGGGTGATAGTCTCTAGAAAGGTTTCATAGATGGATATCTTTTCTCACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGATAGTCTCTAGAAAGGTTTCATAGATGGATATCTTTTCTCACTT  835

seq1  TAAATTGAAGGACATTTGCAATGGAAACACATTTTGAAAAAGTGTAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAGGACATTTGCAATGGAAACACATTTTGAAAAAGTGTAATTT  885

seq1  TGTAGCAAGTGTAGGGTAAGATTTTTTTTTCTCTGTGACAGCTGTTGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAAGTGTAGGGTAAGATTTTTTTTTCTCTGTGACAGCTGTTGTCT  935

seq1  TCCCCATCCTCATTTCCATGCTGAAGTGCTACACCCTCTACCCTGGCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCCTCATTTCCATGCTGAAGTGCTACACCCTCTACCCTGGCAGT  985

seq1  GGTAGAGATGAAACCCTGGTCAGGTCTTAACAGTTGTTAGGTGAGAATTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGATGAAACCCTGGTCAGGTCTTAACAGTTGTTAGGTGAGAATTC  1035

seq1  CTTGGTTATGTTGCATTCTTTGTTTTTGTTTTGTGAAACATGGAGACAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTATGTTGCATTCTTTGTTTTTGTTTTGTGAAACATGGAGACAGA  1085

seq1  GGCTGCCTAGTGTAGCCTAGGCTGGACAAGCCTGGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTAGTGTAGCCTAGGCTGGACAAGCCTGGAATTC  1125

seq1: chr8_33172534_33173239
seq2: B6Ng01-003A11.g_68_773

seq1  GAATTCCATAATAAACAACCTTTGTTACTTTAAAACAATGCATCACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATAAACAACCTTTGTTACTTTAAAACAATGCATCACCTGA  50

seq1  TGACAGTTTCACGGTTACATATGGTGTATTTCCTCAATGAAATGGTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTTCACGGTTACATATGGTGTATTTCCTCAATGAAATGGTGACA  100

seq1  TCTAGTTAACTTAACCTACTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTAACTTAACCTACTTCCTTCTTTCCTTCTTTCCTTCCTTCCTTT  150

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCT  200

seq1  TCCTTTCCACCTCTCCCTTCTCTGTCCTATTCACTTCCAAAGTATTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCACCTCTCCCTTCTCTGTCCTATTCACTTCCAAAGTATTTCTT  250

seq1  CTGTGTATGCTGTGAGTCCATCATTAGGGATATAAAATAAGACATACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGCTGTGAGTCCATCATTAGGGATATAAAATAAGACATACCTA  300

seq1  GCCTTTGAGGAGCTCATGCTATGAAGAAAGCAAGCCTGCAGGCACACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGAGGAGCTCATGCTATGAAGAAAGCAAGCCTGCAGGCACACAGA  350

seq1  CAACTAAGGAATGAGGGATCTGAAGCAAAAACAGAATATACATAATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAGGAATGAGGGATCTGAAGCAAAAACAGAATATACATAATGCCT  400

seq1  GGAGAAGCTTTAGGAAGGACTCAACTGTGATTTCATGAAAACTAGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCTTTAGGAAGGACTCAACTGTGATTTCATGAAAACTAGCAAAG  450

seq1  TCAATGGCAAAGTCACAATCACGTCGAGTCTTACGGAATGAATGTAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCAAAGTCACAATCACGTCGAGTCTTACGGAATGAATGTAAGCT  500

seq1  TATTTGTAGTGAAGGAAAGCGAGAACAAATGCCAAACAGAGCAAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAGTGAAGGAAAGCGAGAACAAATGCCAAACAGAGCAAGAGAAA  550

seq1  AGGTGTCATAGGCAGAGAATCCCAAATACATAAGACACCCAAGACAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCATAGGCAGAGAATCCCAAATACATAAGACACCCAAGACAATTG  600

seq1  GCAGCTTGGTGAGATGGTGCATATCTACAATCCCAGAATTTAGGAGGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTGGTGAGATGGTGCATATCTACAATCCCAGAATTTAGGAGGTCA  650

seq1  TAGCAAGAAGTCAGATTGGGTTATATTAAGAGGAGGAGTAGGAGGGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGAAGTCAGATTGGGTTATATTAAGAGGAGGAGTAGGAGGGGAGG  700

seq1  AGGAGA  706
      ||||||
seq2  AGGAGA  706