BAC Information

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BAC

Clone NameB6Ng01-003B21
Chromosome8 (Build37)
Map Location 99,937,872 - 99,939,006
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC333331
Downstream geneLOC546090, LOC636859, EG384885, LOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003B21.g
ACCDH840929
length1,125
definitionDH840929|Mus musculus domesticus DNA, BAC clone: B6Ng01-003B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactaaaataagagatagtaagagagactcactatgtaggcccta
ctactcttgaacatgctattcagtgcccgttagccttgaattctacatct
tcctgccataacttccatagtactaatcttgatcaatgaagaaccaccca
cgttccaaaaccagatgctcccaacaccccattccaacttcggtgactca
taagcagcagccaattctacacattcccattctttccatgattgcttaat
tcccctacatccatgctccaaaacacttatattgcaacccatcacaacct
agtttctctctctctttttttttctgtagcctttgagctctcctcctctc
caataactctcttacatgaaggctgttgtgaggggtgatttttagcagca
ttctttgggtctctcaaagccatgagaccctttagctgcaaagcacaaac
aggatttcaggtgtgtaccactgggacctgataagaaatttttaaaagaa
ttgaagagggaaactactgattgaataacaactgagaagtataattatag
aggaaataataaccttaaaagaaatcatttatggaggtggggaagtggct
cagcaggtaaattgtctagtgcaaatagtaaattctaggtttatatagaa
actgtgtctcaaaataaagtgaagagctgtaaaggacacttgacattgaa
ctctgacttccacacatgtgtaatggcatgccacacacatatgcatacat
gtgcatataacacaaatacccacatgcataataaactttaaaatacaagc
catagcatctgttactgcattatgctattgataactatcacaccatgaga
gtgatttattttgtccctattacaatgcacaaatcacatttttgaaataa
atattatcagaaaatacaatgtttccttctggcttaaagctctaaaattc
cagcatgaatcccaacacagttcattaggcacacgatgactgctatgaga
cagttactttctctaggttcagctacttcagaggggggtcttgaacgttg
aaaattttgtattttatactgtacttaattatgggtagttaaccggatta
ttcatattacagaacccgaaattta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99937872_99939006
seq2: B6Ng01-003B21.g_66_1190 (reverse)

seq1  TAAATTTTGGGGTTCTGTAATATGAAAATTAATCTGGTTTAACTACCCAT  50
      |||| ||| |||||||||||||||||   ||||| || ||||||||||||
seq2  TAAA-TTTCGGGTTCTGTAATATGAA---TAATCCGG-TTAACTACCCAT  45

seq1  AATAAGTTACAGTATAAAATACAAAGATTTTC-ACGTATCAAGACACTCC  99
      ||| |  |||||||||||||||||| |||||| |||| ||||||| | ||
seq2  AATTAAGTACAGTATAAAATACAAA-ATTTTCAACGT-TCAAGACCCCCC  93

seq1  TCTGAAGTAGCTGGAACCTAGAGAAAGTAACTGTTCTCATAGCAGTCATC  149
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  TCTGAAGTAGCT-GAACCTAGAGAAAGTAACTG-TCTCATAGCAGTCATC  141

seq1  GGTGTGCCTAATGAACTGTGTTGGGGATTCATGCTGGAATTTTAGAGCTT  199
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -GTGTGCCTAATGAACTGTGTT-GGGATTCATGCTGGAATTTTAGAGCTT  189

seq1  TTAGCCAGAAGGAAACATTGTATTTTCTGATAATATTTATTTCAAAAATG  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCAGAAGGAAACATTGTATTTTCTGATAATATTTATTTCAAAAATG  239

seq1  TGATTTGTGCATTGTAATAGGGACAAAATAAATCACTCTCATGGTGTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTGCATTGTAATAGGGACAAAATAAATCACTCTCATGGTGTGAT  289

seq1  AGTTATCAATAGCATAATGCAGTAACAGATGCTATGGCTTGTATTTTAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAATAGCATAATGCAGTAACAGATGCTATGGCTTGTATTTTAAA  339

seq1  GTTTATTATGCATGTGGGTATTTGTGTTATATGCACATGTATGCATATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTATGCATGTGGGTATTTGTGTTATATGCACATGTATGCATATGT  389

seq1  GTGTGGCATGCCATTACACATGTGTGGAAGTCAGAGTTCAATGTCAAGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCATGCCATTACACATGTGTGGAAGTCAGAGTTCAATGTCAAGTG  439

seq1  TCCTTTACAGCTCTTCACTTTATTTTGAGACACAGTTTCTATATAAACCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACAGCTCTTCACTTTATTTTGAGACACAGTTTCTATATAAACCT  489

seq1  AGAATTTACTATTTGCACTAGACAATTTACCTGCTGAGCCACTTCCCCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTACTATTTGCACTAGACAATTTACCTGCTGAGCCACTTCCCCAC  539

seq1  CTCCATAAATGATTTCTTTTAAGGTTATTATTTCCTCTATAATTATACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAAATGATTTCTTTTAAGGTTATTATTTCCTCTATAATTATACTT  589

seq1  CTCAGTTGTTATTCAATCAGTAGTTTCCCTCTTCAATTCTTTTAAAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTGTTATTCAATCAGTAGTTTCCCTCTTCAATTCTTTTAAAAATT  639

seq1  TCTTATCAGGTCCCAGTGGTACACACCTGAAATCCTGTTTGTGCTTTGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCAGGTCCCAGTGGTACACACCTGAAATCCTGTTTGTGCTTTGCA  689

seq1  GCTAAAGGGTCTCATGGCTTTGAGAGACCCAAAGAATGCTGCTAAAAATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGGTCTCATGGCTTTGAGAGACCCAAAGAATGCTGCTAAAAATC  739

seq1  ACCCCTCACAACAGCCTTCATGTAAGAGAGTTATTGGAGAGGAGGAGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCACAACAGCCTTCATGTAAGAGAGTTATTGGAGAGGAGGAGAGC  789

seq1  TCAAAGGCTACAGAAAAAAAAAGAGAGAGAGAAACTAGGTTGTGATGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCTACAGAAAAAAAAAGAGAGAGAGAAACTAGGTTGTGATGGGT  839

seq1  TGCAATATAAGTGTTTTGGAGCATGGATGTAGGGGAATTAAGCAATCATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATAAGTGTTTTGGAGCATGGATGTAGGGGAATTAAGCAATCATG  889

seq1  GAAAGAATGGGAATGTGTAGAATTGGCTGCTGCTTATGAGTCACTGAAGT  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAAGAATGGGAATGTGTAGAATTGGCTGCTGCTTATGAGTCACCGAAGT  939

seq1  TGGAATGGGGTGTTGGGAGCATCTGGTTCTGGAACGTGGGTGGTTCTTCA  999
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGAATGGGGTGTTGGGAGCATCTGGTTTTGGAACGTGGGTGGTTCTTCA  989

seq1  TTGATCAAGATTAGTACTATGGAAGTTATGGCAGGAAGATGTAGAATTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAAGATTAGTACTATGGAAGTTATGGCAGGAAGATGTAGAATTCA  1039

seq1  AGGCTAACTTGCATTGAATAGCATGTTCACTAGTAGTCTGGCCTACATAG  1099
      ||||||||  ||| |||||||||||||||  ||||||  |||||||||||
seq2  AGGCTAACGGGCACTGAATAGCATGTTCAAGAGTAGTAGGGCCTACATAG  1089

seq1  TGAGTCTCTCTTACTATCTCTTATCTTAGTGAATTC  1135
      |||||||||||||||||||||||| |||||||||||
seq2  TGAGTCTCTCTTACTATCTCTTATTTTAGTGAATTC  1125