BAC Information

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BAC

Clone NameB6Ng01-003G21
Chromosome8 (Build37)
Map Location 74,267,651 - 74,350,434
singlet/doubletdoublet
Overlap geneEG665991, LOC665996
Upstream genePde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1
Downstream geneLOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003G21.bB6Ng01-003G21.g
ACCDH841143DH841144
length1,1491,079
definitionDH841143|Mus musculus domesticus DNA, BAC clone: B6Ng01-003G21, 5' end.DH841144|Mus musculus domesticus DNA, BAC clone: B6Ng01-003G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,349,266 - 74,350,434)(74,267,651 - 74,268,732)
sequence
gaattcaaatttcaggtcacaaagacaggagaggacacattttgtccttt
ctttttatgtctttccattttgcagagaatgatgatgtgaggtagcaaag
agcagaagataaaagcataacactaagcaggtccccattaaagatttcta
gatactctgggccttttactcatcatgcagaaaggaagcagaggttgctg
aatatcagatagtgtccttagtgatgaagttggtctgaatacagaaacat
tttggggactgtaaatcaagattctgacattagcagacaagtgataaaat
gaataaaatcagtgaaactttaaatcaaaagtaacattgccaattttcct
tataggtgcgaggaaataaaccacctattttccttcctgttcctgggaag
cagggaatttatgtgcttgaggctcctggtgacattgagccaactcaacc
cacaagtgctgctgacagcagggctcctgctgatgctgagccaaattctt
ccacctgtgctgctgtcaatggggctcctgttaatgttgagccaactcct
tcacaacttgcacctgacagtggtgctcctgctgatgttgagccaactca
ttccacctgtgctgctgacaccagggctcctgctgacatagaaccaactc
cttcacaaagtgctcctgacagtactgctccttctaatattgagaaaatt
acttccccatgtccttctgacagttctgaatctgatgaaaaatatgactt
agaaacaggtagtgacattgggttggacttcataactgattcagatttat
acatggagcatgcaagggccacaccccattgtgacccagagcctactcct
gatacctgcacttgctgttccctagattccattgaaagaactgacatgaa
tgttctgacactgcttggagcatagacaagtatgctattctttcttcagt
gaggacccagtcctgtgctgacctagatgagattagctgaggattttatg
acgcttagagtcagcgatctcactggcatagcgggtccactgtcaggtac
aggttttctttggacagaatgctactgctgctggtatgcccttgaagtgg
gttcttaatcctgttatcatgtatgagtgggattagaattcaattcggc
gaattctcagtcaagaaggtgctgtaggatggtgttgagcagttcatgct
ccacagaccctaggagatgtcctagaagtcaacgaggctgagctgtgcgg
atggcaggtcttcaggagagagaaatgataaccaaagccactaagaaatt
cctgaatcatagcatctgttaacaagatattttgtttactaagaggctct
gagtcacacagaggcatctgaggagtgaggggagccctgtagccattgtt
ctgacacccactagggtgtgagaaaggtggtattcttcctgtggagcctg
tcctgggagcagccctcacctagggcccagctcccactgtcagcaggagg
caggcagctctggtctttgcacatctctctcctctcttgcaggaagtctg
cagctgctggtgcttgtgctgttcccaagacaaagggaaggagagtgcaa
ggtgagggctgccagggtccttttaggaagtgtctgtctgttttgtcttc
actaatatttctgttaaattttgttattccatgtgtattcatctcattgg
aggggtgtgtgtagaaggtagaggacaaaccatgggagtcactttgacct
accatgtgtggtctcaggcgctgaagtgggtcattgagcttggctacaag
gaccctacatgctgaaattcttcctggctctgatttgagacagacagaca
gagagagagacagagtgagagagagagagacagacagagagagacagaga
gagacagagacagagacagagagacagagacagacagagagagagagaca
gacagacacactgattcatagagcccagttttgtccactaaagtcctgat
cctcctgcctcaatgtattgccacctagttcatgaaagggttcatgttat
tgggggagggcacagaaacgagtctgaagctttctctgctcagtggcatg
ctttggggactggttgtttccatcaggaggggtcatttgactgcagtggg
cctctggaagagtggaagctctttttgtctggcgtcaggctccaagacag
gctccaaaggggacagtctggagccaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74349266_74350434
seq2: B6Ng01-003G21.b_45_1193 (reverse)

seq1  GCCGAATTTGATTTCTAATCCACATCATCATTGATAACAGGAATGTAAGA  50
      |||||| |||| |||||||||   ||||   |||||||||||   |||||
seq2  GCCGAA-TTGAATTCTAATCCCACTCATACATGATAACAGGA--TTAAGA  47

seq1  AACCACATCAAGGGCATTACCAGCAGCAGTAGCATATCTGGTTCCCAAAG  100
      | |||| ||||||||| |||||||||||||||||| ||||    ||||||
seq2  ACCCACTTCAAGGGCA-TACCAGCAGCAGTAGCAT-TCTG---TCCAAAG  92

seq1  AAAACCTGGTACCTGGACAGTGGACCCGCTATGGCCAGTGAGATCGGCTG  150
      ||||||| |||||| ||||||||||||||||| |||||||||||| ||||
seq2  AAAACCT-GTACCT-GACAGTGGACCCGCTAT-GCCAGTGAGATC-GCTG  138

seq1  ACTCTAAAGCGTCATAAAAATCCTCAGCTATATCTTCATCTAGGTCAGCA  200
      ||||| ||||||||| |||||||||||||| ||| |||||||||||||| 
seq2  ACTCT-AAGCGTCAT-AAAATCCTCAGCTA-ATC-TCATCTAGGTCAGC-  183

seq1  ACAGGACTGGGTTCCTCACCTGAAGAAAGAATAGCATACTTGTCTTATGC  250
      ||||||||||| |||||| ||||||||||||||||||||||||| |||||
seq2  ACAGGACTGGG-TCCTCA-CTGAAGAAAGAATAGCATACTTGTC-TATGC  230

seq1  TCCAAGCAGTGTCAGAACATTCATGTCAGTTCTTTCAATGGAATCTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAGTGTCAGAACATTCATGTCAGTTCTTTCAATGGAATCTAGGG  280

seq1  AACAGCAAGTGCAGGTATCAGGAGTAGGCTCTGGGTCACAATGGGGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAGTGCAGGTATCAGGAGTAGGCTCTGGGTCACAATGGGGTGTG  330

seq1  GCCCTTGCATGCTCCATGTATAAATCTGAATCAGTTATGAAGTCCAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGCATGCTCCATGTATAAATCTGAATCAGTTATGAAGTCCAACCC  380

seq1  AATGTCACTACCTGTTTCTAAGTCATATTTTTCATCAGATTCAGAACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACTACCTGTTTCTAAGTCATATTTTTCATCAGATTCAGAACTGT  430

seq1  CAGAAGGACATGGGGAAGTAATTTTCTCAATATTAGAAGGAGCAGTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGACATGGGGAAGTAATTTTCTCAATATTAGAAGGAGCAGTACTG  480

seq1  TCAGGAGCACTTTGTGAAGGAGTTGGTTCTATGTCAGCAGGAGCCCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGCACTTTGTGAAGGAGTTGGTTCTATGTCAGCAGGAGCCCTGGT  530

seq1  GTCAGCAGCACAGGTGGAATGAGTTGGCTCAACATCAGCAGGAGCACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAGCACAGGTGGAATGAGTTGGCTCAACATCAGCAGGAGCACCAC  580

seq1  TGTCAGGTGCAAGTTGTGAAGGAGTTGGCTCAACATTAACAGGAGCCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTGCAAGTTGTGAAGGAGTTGGCTCAACATTAACAGGAGCCCCA  630

seq1  TTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCAGCACAGGTGGAAGAATTTGGCTCAGCATCAGCAGGAGCCCT  680

seq1  GCTGTCAGCAGCACTTGTGGGTTGAGTTGGCTCAATGTCACCAGGAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGCAGCACTTGTGGGTTGAGTTGGCTCAATGTCACCAGGAGCCT  730

seq1  CAAGCACATAAATTCCCTGCTTCCCAGGAACAGGAAGGAAAATAGGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACATAAATTCCCTGCTTCCCAGGAACAGGAAGGAAAATAGGTGGT  780

seq1  TTATTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGATTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTCGCACCTATAAGGAAAATTGGCAATGTTACTTTTGATTTAA  830

seq1  AGTTTCACTGATTTTATTCATTTTATCACTTGTCTGCTAATGTCAGAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCACTGATTTTATTCATTTTATCACTTGTCTGCTAATGTCAGAATC  880

seq1  TTGATTTACAGTCCCCAAAATGTTTCTGTATTCAGACCAACTTCATCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTACAGTCCCCAAAATGTTTCTGTATTCAGACCAACTTCATCACT  930

seq1  AAGGACACTATCTGATATTCAGCAACCTCTGCTTCCTTTCTGCATGATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACTATCTGATATTCAGCAACCTCTGCTTCCTTTCTGCATGATGA  980

seq1  GTAAAAGGCCCAGAGTATCTAGAAATCTTTAATGGGGACCTGCTTAGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGGCCCAGAGTATCTAGAAATCTTTAATGGGGACCTGCTTAGTGT  1030

seq1  TATGCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCTGCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTTATCTTCTGCTCTTTGCTACCTCACATCATCATTCTCTGCAA  1080

seq1  AATGGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTCTTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAGACATAAAAAGAAAGGACAAAATGTGTCCTCTCCTGTCTTTG  1130

seq1  TGACCTGAAATTTGAATTC  1169
      |||||||||||||||||||
seq2  TGACCTGAAATTTGAATTC  1149

seq1: chr8_74267651_74268732
seq2: B6Ng01-003G21.g_67_1145

seq1  GAATTCTCAGTCAAGAAGGTGCTGTAGGATGGTGTTGAGCAGTTCATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTCAAGAAGGTGCTGTAGGATGGTGTTGAGCAGTTCATGCT  50

seq1  CCACAGACCCTAGGAGATGTCCTAGAAGTCAACGAGGCTGAGCTGTGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGACCCTAGGAGATGTCCTAGAAGTCAACGAGGCTGAGCTGTGCGG  100

seq1  ATGGCAGGTCTTCAGGAGAGAGAAATGATAACCAAAGCCACTAAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGTCTTCAGGAGAGAGAAATGATAACCAAAGCCACTAAGAAATT  150

seq1  CCTGAATCATAGCATCTGTTAACAAGATATTTTGTTTACTAAGAGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCATAGCATCTGTTAACAAGATATTTTGTTTACTAAGAGGCTCT  200

seq1  GAGTCACACAGAGGCATCTGAGGAGTGAGGGGAGCCCTGTAGCCATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACACAGAGGCATCTGAGGAGTGAGGGGAGCCCTGTAGCCATTGTT  250

seq1  CTGACACCCACTAGGGTGTGAGAAAGGTGGTATTCTTCCTGTGGAGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACCCACTAGGGTGTGAGAAAGGTGGTATTCTTCCTGTGGAGCCTG  300

seq1  TCCTGGGAGCAGCCCTCACCTAGGGCCCAGCTCCCACTGTCAGCAGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAGCAGCCCTCACCTAGGGCCCAGCTCCCACTGTCAGCAGGAGG  350

seq1  CAGGCAGCTCTGGTCTTTGCACATCTCTCTCCTCTCTTGCAGGAAGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCTCTGGTCTTTGCACATCTCTCTCCTCTCTTGCAGGAAGTCTG  400

seq1  CAGCTGCTGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGAGAGTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTGGTGCTTGTGCTGTTCCCAAGACAAAGGGAAGGAGAGTGCAA  450

seq1  GGTGAGGGCTGCCAGGGTCCTTTTAGGAAGTGTCTGTCTGTTTTGTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGGCTGCCAGGGTCCTTTTAGGAAGTGTCTGTCTGTTTTGTCTTC  500

seq1  ACTAATATTTCTGTTAAATTTTGTTATTCCATGTGTATTCATCTCATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATTTCTGTTAAATTTTGTTATTCCATGTGTATTCATCTCATTGG  550

seq1  AGGGGTGTGTGTAGAAGGTAGAGGACAAACCATGGGAGTCACTTTGACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGTGTGTAGAAGGTAGAGGACAAACCATGGGAGTCACTTTGACCT  600

seq1  ACCATGTGTGGTCTCAGGCGCTGAAGTGGGTCATTGAGCTTGGCTACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGTGGTCTCAGGCGCTGAAGTGGGTCATTGAGCTTGGCTACAAG  650

seq1  GACCCTACATGCTGAAATTCTTCCTGGCTCTGATTTGAGACAGACAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTACATGCTGAAATTCTTCCTGGCTCTGATTTGAGACAGACAGACA  700

seq1  GAGAGAGAGACAGAGTGAGAGAGAGAGAGACAGACAGAGAGAGACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGTGAGAGAGAGAGAGACAGACAGAGAGAGACAGAGA  750

seq1  GAGACAGAGACAGAGACAGAGAGACAGAGACAGACAGAGAGAGAGAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGACAGAGACAGAGAGACAGAGACAGACAGAGAGAGAGAGACA  800

seq1  GACAGACACACTGATTCATAGAGCCCAGTTTTGTCCACTAAAGTCCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACACACTGATTCATAGAGCCCAGTTTTGTCCACTAAAGTCCTGAT  850

seq1  CCTCCTGCCTCAATGTATTGCCACCTAGTTCATGAAAGGGTTCATGTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCCTCAATGTATTGCCACCTAGTTCATGAAAGGGTTCATGTTAT  900

seq1  TGGGGGAGGGCACAGAAACGAGTCTGAAGCTTTCTCTGCTCAGTGGCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGGCACAGAAACGAGTCTGAAGCTTTCTCTGCTCAGTGGCATG  950

seq1  CCTTTGGGGACTGGTTGTTTCCATCATGAGGTGTCATTTGACTGCAGTGG  1000
       ||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  -CTTTGGGGACTGGTTGTTTCCATCAGGAGGGGTCATTTGACTGCAGTGG  999

seq1  GCCTCTGG-AGAGTTGGAGTCTC-TTTTGTCATGGCGTCAGGCTCTCAAG  1048
      |||||||| |||| ||||  ||| ||||||| ||||||||||||| ||||
seq2  GCCTCTGGAAGAG-TGGAAGCTCTTTTTGTC-TGGCGTCAGGCTC-CAAG  1046

seq1  ACAGGCCTCAAAGGTGCAGGTCTGGAGGCCAGGC  1082
      ||||||  |||||| |   ||||||| |||||||
seq2  ACAGGCTCCAAAGGGGACAGTCTGGA-GCCAGGC  1079