BAC Information

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BAC

Clone NameB6Ng01-003O10
Chromosome8 (Build37)19 (Build37)
Map Location 51,862,137 - 51,862,17333,317,839 - 33,319,087
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003O10.bB6Ng01-003O10.g
ACCDH841470DH841471
length6971,247
definitionDH841470|Mus musculus domesticus DNA, BAC clone: B6Ng01-003O10, 5' end.DH841471|Mus musculus domesticus DNA, BAC clone: B6Ng01-003O10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,862,137 - 51,862,173)(33,317,839 - 33,319,087)
sequence
gaattcatgaaattcttaggcaaatggatgcatctggaggatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatgatatgcactcactga
taagtggatattagcccagaaacttagaatatccaagatgtaatttgcaa
aacacatgaaactcaagaagaaggaagaccaaaatgtggctatttcaatc
cttcttagaatggggaacaaaatccccattgaaggagttacagagacaaa
gtttggagctgagatggaagaaggaccatgcagagactgccccacctggg
gatccatcccatatacaaccaccaaacccagacactattgcatatgccag
aaagattttgctgacaggaccctgatatagctgtctcgtgtaaggctatg
ccagtgcctggcaaatacagaagtggatactcatagtcatctattggatg
gaacacagggcccctaatgaaggagctagagaaagtacccaaggagctaa
aggggtctgcaaccctataggagtaacaacaatatgaactaaccagtacc
cctcagatctgtgtctctagttgcatatgtagcagaggatggcctagttg
gccatcaatgggaggagaggtcttgcaaagatcaaatgccccagtacagg
ggaatgccagggccaggaagcaggagtgggtgggttggggagcaggg
gaattctgtgtggacccaagaatgattacatcacgggagagacctgtcag
ccagtggagtgtcttctggcaggagctgtatgaatatctctgtgacccag
gttttgcactatgctcctgagctagagtcaggtctagagttagagatttc
gcaaggaagagttaagagacatccttgcagtagtatttccatgacaaagg
gcattgtccttagatgtccttgtctgtgtctgagaaggacctccaagctt
cccttgggccactttgaagttactttaactttagtaagtaaatgaaggtg
ttgtcagatgtagactgtgggctgtcctaactcatattcttcctcaagat
tggcaattgaggtacttgtgcaggaaggagtaaaatcatttttaaaattg
ctttaaagtaatgtttgtactatgctcaagaacacaattctttccacaaa
gacttctctgatcttacacgttcaccttaatttattactcttagggttct
ctatgacatttggaaagacttcttataccaggcacataaacattatgtgt
agcttatattctatgatataagtattcagtattaaaagatggaactgttg
aacactctagtcttttgatccatttgtacagttttctgaacgccctacag
acatggggtagatggtgcatatttgatctctgtccaagagtgccttttag
acattcattcacgagataccttttgtccgtttatataagcctttgacgaa
ataaagcaccaacaattgaatagtcaaaactgaagaaacaccattaattt
taataacatcacaacacaatgtggtcataactactatatgacatgttaat
aatgtacaccttccaaatgatccaacacatgcacatgctactgaggtagc
attgtgttatagtgatcagaggctgttgtaagatcccacacatatcacac
actagctgattgatcgtgtaaagtcatatacttctagcttttagtccctc
actataaattataatttattatccctgcttatcagagctgttgttgtgca
agaaaaaattgcagtaacaagaggaaggcatttatcaccctaacaggttt
taaattcttaaagaaagtttagtggatccttccagtttacatggatggtc
aatggtgcatgtttaccaaagaaatattttattctgcagcagctttacta
tttctattctgaattactgaagttttataacctgtgttgtgatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51862137_51862173
seq2: B6Ng01-003O10.b_705_741 (reverse)

seq1  CCCTGCTCACCAACCCACCCACTCCTGCTTCCTGGCC  37
      |||||||| ||||||||||||||||||||||||||||
seq2  CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGGCC  37

seq1: chr19_33317839_33319087
seq2: B6Ng01-003O10.g_67_1313 (reverse)

seq1  TTAAATTACAACA-AGGTTATTAAACATTCAGTAAATTCAGAATAGAAAT  49
      |||||| |||||| ||||||| |||| |||||| ||||||||||||||||
seq2  TTAAATCACAACACAGGTTATAAAAC-TTCAGT-AATTCAGAATAGAAAT  48

seq1  AGTAAAACCCTGCCTTGCAGA--TAAATA-TTCTTTGGTGAACATGCAAC  96
      ||||||   ||||  ||||||   ||||| ||||||||| |||||||| |
seq2  AGTAAA--GCTGC--TGCAGAATAAAATATTTCTTTGGTAAACATGCACC  94

seq1  ATTGGACAATCATGTAAAACTGAAGAATCAACTAAACTTTCTTTTAAGAA  146
      ||||  ||  ||||||||   |||| ||| ||||||||||| ||||||||
seq2  ATTGACCATCCATGTAAACTGGAAGGATCCACTAAACTTTC-TTTAAGAA  143

seq1  TTAAAAACCTGT--AGGTGATAAATG-CTTTCTCTTGTTACTGCATTTGT  193
      || |||||||||   ||||||||||| ||| |||||||||||||| || |
seq2  TTTAAAACCTGTTAGGGTGATAAATGCCTTCCTCTTGTTACTGCAATTTT  193

seq1  TTCTTGCAACACAACAGCTCTGATAAGCAGAGATAATAAATTATAATTTA  243
      ||||||||  |||||||||||||||||||| |||||||||||||||||||
seq2  TTCTTGCACAACAACAGCTCTGATAAGCAGGGATAATAAATTATAATTTA  243

seq1  TAGTTGAGGGACTAAAAGCTTAGAAGTATATGACTTTACACGATCAATCA  293
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAG-TGAGGGACTAAAAGC-TAGAAGTATATGACTTTACACGATCAATCA  291

seq1  GCTAGTGTGTGATATGTGTGGGATCTTACAACAGCCTCTGATCACTATAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGTGTGATATGTGTGGGATCTTACAACAGCCTCTGATCACTATAA  341

seq1  CACAATGCTACCTCAGTAGCATGTGCATGTGTTGGATCATTTGGAAGGTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGCTACCTCAGTAGCATGTGCATGTGTTGGATCATTTGGAAGGTG  391

seq1  TACATTATTAACATGTCATATAGTAGTTATGACCACATTGTGTTGTGATG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTATTAACATGTCATATAGTAGTTATGACCACATTGTGTTGTGATG  441

seq1  TTATTAAAATTAATGGTGTTTCTTCAGTTTTGACTATTCAATTGTTGGTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAATTAATGGTGTTTCTTCAGTTTTGACTATTCAATTGTTGGTG  491

seq1  CTTTATTTCGTCAAAGGCTTATATAAACGGACAAAAGGTATCTCGTGAAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCGTCAAAGGCTTATATAAACGGACAAAAGGTATCTCGTGAAT  541

seq1  GAATGTCTAAAAGGCACTCTTGGACAGAGATCAAATATGCACCATCTACC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCTAAAAGGCACTCTTGGACAGAGATCAAATATGCACCATCTACC  591

seq1  CCATGTCTGTAGGGCGTTCAGAAAACTGTACAAATGGATCAAAAGACTAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTGTAGGGCGTTCAGAAAACTGTACAAATGGATCAAAAGACTAG  641

seq1  AGTGTTCAACAGTTCCATCTTTTAATACTGAATACTTATATCATAGAATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCAACAGTTCCATCTTTTAATACTGAATACTTATATCATAGAATA  691

seq1  TAAGCTACACATAATGTTTATGTGCCTGGTATAAGAAGTCTTTCCAAATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTACACATAATGTTTATGTGCCTGGTATAAGAAGTCTTTCCAAATG  741

seq1  TCATAGAGAACCCTAAGAGTAATAAATTAAGGTGAACGTGTAAGATCAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGAACCCTAAGAGTAATAAATTAAGGTGAACGTGTAAGATCAGA  791

seq1  GAAGTCTTTGTGGAAAGAATTGTGTTCTTGAGCATAGTACAAACATTACT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTTGTGGAAAGAATTGTGTTCTTGAGCATAGTACAAACATTACT  841

seq1  TTAAAGCAATTTTAAAAATGATTTTACTCCTTCCTGCACAAGTACCTCAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCAATTTTAAAAATGATTTTACTCCTTCCTGCACAAGTACCTCAA  891

seq1  TTGCCAATCTTGAGGAAGAATATGAGTTAGGACAGCCCACAGTCTACATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAATCTTGAGGAAGAATATGAGTTAGGACAGCCCACAGTCTACATC  941

seq1  TGACAACACCTTCATTTACTTACTAAAGTTAAAGTAACTTCAAAGTGGCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACACCTTCATTTACTTACTAAAGTTAAAGTAACTTCAAAGTGGCC  991

seq1  CAAGGGAAGCTTGGAGGTCCTTCTCAGACACAGACAAGGACATCTAAGGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGCTTGGAGGTCCTTCTCAGACACAGACAAGGACATCTAAGGA  1041

seq1  CAATGCCCTTTGTCATGGAAATACTACTGCAAGGATGTCTCTTAACTCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCCTTTGTCATGGAAATACTACTGCAAGGATGTCTCTTAACTCTT  1091

seq1  CCTTGCGAAATCTCTAACTCTAGACCTGACTCTAGCTCAGGAGCATAGTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCGAAATCTCTAACTCTAGACCTGACTCTAGCTCAGGAGCATAGTG  1141

seq1  CAAAACCTGGGTCACAGAGATATTCATACAGCTCCTGCCAGAAGACACTC  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTGGGTCACAGAGATATTCATACAGCTCCTGCCAGAAGACACTC  1191

seq1  CACTGGCTGACAGGTCTCTCCCGTGATGTAATCATTCTTGGGTCCACACA  1243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTGACAGGTCTCTCCCGTGATGTAATCATTCTTGGGTCCACACA  1241

seq1  GAATTC  1249
      ||||||
seq2  GAATTC  1247