BAC Information

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BAC

Clone NameB6Ng01-005M24
Chromosome8 (Build37)
Map Location 51,787,023 - 51,912,009
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005M24.bB6Ng01-005M24.g
ACCDH842848DH842849
length9751,132
definitionDH842848|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M24, 5' end.DH842849|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,911,431 - 51,912,009)(51,787,023 - 51,788,152)
sequence
gaattcactcctctcttctggccctcaaaaattttactctttacatagag
acagagcattttaaagtatcttttttatatttatttatgagaatgtcaga
catatataaaatgaattattccccaaatctgatattcaactcctttcata
tttcttcaataagttcctcttacaacttcctgtcatatttactttctata
acctcctaagaccagttagggctggcactggcagatcatgggaaacttac
aaataaatggtcatgtcctcaaaatgagtgacccccaagaaagataccaa
ctaccaacagcccttctgtaagtggtgcacctcagagctcatttgtcggt
cttgaatggactttggctggttaggatattttgatggtgtagtgcagcta
agccccaggtgttatgtgtttatgagtatcataatcatcacgctgtgggg
taaaaaaaaatatcattatccagaatgcttgtctatgatctcaggtcctt
accttctttctaccaccccatctgtgatgagtcctgagtctctgggagag
agagatggatataaatgcttcatttaggactggttactgagtctcagtac
tttactagtcagtcctgggccattctccagtgactggggtctattgccaa
caggagacctctgaccgaggtggagagctgcaaactccccagttcagtta
caatcccctaaaatatcatttttagttaaaaatattatgaaattttttag
tcacaaacactgctgtagttattcttagtatctttaaggtatggttttca
aaaactacacatgtataaaaacagtactcttgaatattacttatatacac
catacatcttcatgtatgcatcacctttaatattaatatattataattgt
cctgcaagtgctattgtttcatacctattgatctataggtctcctgtact
tagtcagcacatgtaatttacaaaa
gaattctaatgagattttgttttcagcagggtctctaatattgttaggat
acttgtacctcagttttctgaaattaaccccaagatgcaaagactttcca
gaggtattagctaagaaatatccatagacacagagacatacacagacaca
aggcagacggacaggcagattcacagagaaacaggtacacacagagaatg
tgaggcagggggcagacaaacagagacacatacacagagagacagacaga
cagagtctagatagacagagaggttattattaaacatcttaatgtatctg
cctagctgatccaaaatttaaagtaaaggcatcctaatttctgaagtttt
aaaaaataattctaaagcaaactttctctattcaaaataaaagtaataat
aaaagagctataatgcttgactggcatgcatttaaataatcatgatgcaa
gaagctgtaaacagaacccaatgactggcctaagtttagcattttgagaa
aaatctgagcttcccatctgtggacagtatgttacccagtagcaaaattt
ctctgatgcctagtctttagtgttgaaccttgcagtactcaagcacacta
aaacctatacttaccaaggtataattggttcctttatgcaccttacacaa
attagcttgcttattacattagataggcactcaattaataagatctcaga
gagctgagaatgtggtaggtaatttaaataagtcaaatgctaaacaaaac
tgcagtcacaaatctgggtgaataaatagggatggagtcaaatggttttt
ataaaatacaactaaggaatactttcattgaatttctctctatgactcaa
aacacaaatataagttggtataatcaccaagatgttatttgtgataagct
ttaaaagtgaacagcaataaaataaattcagattccttccattcctcttt
tcactagttataccgagttagaaagtgttttttgaccaagaaatataatt
taaaatagcttcaaatttacttctgatgttatttttctaacacctgtttc
tggaatacaccacactaccaatggatacataggttgacaagcaatttaag
ctgtggaatcagcaactgttttccacgtaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51911431_51912009
seq2: B6Ng01-005M24.b_45_623 (reverse)

seq1  TCCTAAATGAAGCATTTATATCCATCTCTCTCTCCCAGAGACTCAGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATGAAGCATTTATATCCATCTCTCTCTCCCAGAGACTCAGGACT  50

seq1  CATCACAGATGGGGTGGTAGAAAGAAGGTAAGGACCTGAGATCATAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGATGGGGTGGTAGAAAGAAGGTAAGGACCTGAGATCATAGACA  100

seq1  AGCATTCTGGATAATGATATTTTTTTTTACCCCACAGCGTGATGATTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTGGATAATGATATTTTTTTTTACCCCACAGCGTGATGATTATG  150

seq1  ATACTCATAAACACATAACACCTGGGGCTTAGCTGCACTACACCATCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCATAAACACATAACACCTGGGGCTTAGCTGCACTACACCATCAAA  200

seq1  ATATCCTAACCAGCCAAAGTCCATTCAAGACCGACAAATGAGCTCTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTAACCAGCCAAAGTCCATTCAAGACCGACAAATGAGCTCTGAGG  250

seq1  TGCACCACTTACAGAAGGGCTGTTGGTAGTTGGTATCTTTCTTGGGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACTTACAGAAGGGCTGTTGGTAGTTGGTATCTTTCTTGGGGGTC  300

seq1  ACTCATTTTGAGGACATGACCATTTATTTGTAAGTTTCCCATGATCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTTGAGGACATGACCATTTATTTGTAAGTTTCCCATGATCTGCC  350

seq1  AGTGCCAGCCCTAACTGGTCTTAGGAGGTTATAGAAAGTAAATATGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGCCCTAACTGGTCTTAGGAGGTTATAGAAAGTAAATATGACAG  400

seq1  GAAGTTGTAAGAGGAACTTATTGAAGAAATATGAAAGGAGTTGAATATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGTAAGAGGAACTTATTGAAGAAATATGAAAGGAGTTGAATATCA  450

seq1  GATTTGGGGAATAATTCATTTTATATATGTCTGACATTCTCATAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGGAATAATTCATTTTATATATGTCTGACATTCTCATAAATAAA  500

seq1  TATAAAAAAGATACTTTAAAATGCTCTGTCTCTATGTAAAGAGTAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAAGATACTTTAAAATGCTCTGTCTCTATGTAAAGAGTAAAATT  550

seq1  TTTGAGGGCCAGAAGAGAGGAGTGAATTC  579
      |||||||||||||||||||||||||||||
seq2  TTTGAGGGCCAGAAGAGAGGAGTGAATTC  579

seq1: chr8_51787023_51788152
seq2: B6Ng01-005M24.g_68_1199

seq1  GAATTCTAATGAGATTTTGTTTTCAGCAGGGTCTCTAATATTGTTAGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGAGATTTTGTTTTCAGCAGGGTCTCTAATATTGTTAGGAT  50

seq1  ACTTGTACCTCAGTTTTCTGAAATTAACCCCAAGATGCAAAGACTTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTACCTCAGTTTTCTGAAATTAACCCCAAGATGCAAAGACTTTCCA  100

seq1  GAGGTATTAGCTAAGAAATATCCATAGACACAGAGACATACACAGACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATTAGCTAAGAAATATCCATAGACACAGAGACATACACAGACACA  150

seq1  AGGCAGACGGACAGGCAGATTCACAGAGAAACAGGTACACACAGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACGGACAGGCAGATTCACAGAGAAACAGGTACACACAGAGAATG  200

seq1  TGAGGCAGGGGGCAGACAAACAGAGACACATACACAGAGAGACAGACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGGGGCAGACAAACAGAGACACATACACAGAGAGACAGACAGA  250

seq1  CAGAGTCTAGATAGACAGAGAGGTTATTATTAAACATCTTAATGTATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTAGATAGACAGAGAGGTTATTATTAAACATCTTAATGTATCTG  300

seq1  CCTAGCTGATCCAAAATTTAAAGTAAAGGCATCCTAATTTCTGAAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGATCCAAAATTTAAAGTAAAGGCATCCTAATTTCTGAAGTTTT  350

seq1  AAAAAATAATTCTAAAGCAAACTTTCTCTATTCAAAATAAAAGTAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAATTCTAAAGCAAACTTTCTCTATTCAAAATAAAAGTAATAAT  400

seq1  AAAAGAGCTATAATGCTTGACTGGCATGCATTTAAATAATCATGATGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCTATAATGCTTGACTGGCATGCATTTAAATAATCATGATGCAA  450

seq1  GAAGCTGTAAACAGAACCCAATGACTGGCCTAAGTTTAGCATTTTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTAAACAGAACCCAATGACTGGCCTAAGTTTAGCATTTTGAGAA  500

seq1  AAATCTGAGCTTCCCATCTGTGGACAGTATGTTACCCAGTAGCAAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGCTTCCCATCTGTGGACAGTATGTTACCCAGTAGCAAAATTT  550

seq1  CTCTGATGCCTAGTCTTTAGTGTTGAACCTTGCAGTACTCAAGCACACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGCCTAGTCTTTAGTGTTGAACCTTGCAGTACTCAAGCACACTA  600

seq1  AAACCTATACTTACCAAGGTATAATTGGTTCCTTTATGCACCTTACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATACTTACCAAGGTATAATTGGTTCCTTTATGCACCTTACACAA  650

seq1  ATTAGCTTGCTTATTACATTAGATAGGCACTCAATTAATAAGATCTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTTGCTTATTACATTAGATAGGCACTCAATTAATAAGATCTCAGA  700

seq1  GAGCTGAGAATGTGGTAGGTAATTTAAATAAGTCAAATGCTAAACAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGAATGTGGTAGGTAATTTAAATAAGTCAAATGCTAAACAAAAC  750

seq1  TGCAGTCACAAATCTGGGTGAATAAATAGGGATGGAGTCAAATGGTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCACAAATCTGGGTGAATAAATAGGGATGGAGTCAAATGGTTTTT  800

seq1  ATAAAATACAACTAAGGAATACTTTCATTGAATTTCTCTCTATGACTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATACAACTAAGGAATACTTTCATTGAATTTCTCTCTATGACTCAA  850

seq1  AACACAAATATAAGTTGGTATAATCACCAAGATGTTATTTGTGATAAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAATATAAGTTGGTATAATCACCAAGATGTTATTTGTGATAAGCT  900

seq1  TTAAAAGTGAACAGCAATAAAATAAATTCAGATTCCTTCCATTCCTCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTGAACAGCAATAAAATAAATTCAGATTCCTTCCATTCCTCTTT  950

seq1  TCACTAGTTATACCGAGGTTAGAAAGTG-TTTTTGACCAAGAAATATAAT  999
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TCACTAGTTATACCGA-GTTAGAAAGTGTTTTTTGACCAAGAAATATAAT  999

seq1  TAAAAATAGCTTCAAATTTACCTCTGATGT--ATTTTCTAACA-CTGTTT  1046
      | ||||||||||||||||||| ||||||||   |||||||||| ||||||
seq2  TTAAAATAGCTTCAAATTTACTTCTGATGTTATTTTTCTAACACCTGTTT  1049

seq1  CTGGAATACA-CACACTACCAAATGGATACATAGTTTGACAAGCCAATTA  1095
      |||||||||| ||||||||| ||||||||||||| ||||||||| | |||
seq2  CTGGAATACACCACACTACC-AATGGATACATAGGTTGACAAGCAATTTA  1098

seq1  AGCTGTGGAAATCCAGCAACTG-TTTCAACGTAAGG  1130
      ||||||||||   ||||||||| |||| ||||||||
seq2  AGCTGTGGAA--TCAGCAACTGTTTTCCACGTAAGG  1132