BAC Information

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BAC

Clone NameB6Ng01-007D21
Chromosome8 (Build37)
Map Location 35,129,218 - 35,252,285
singlet/doubletdoublet
Overlap geneDctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66
Upstream geneLOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769
Downstream geneLOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007D21.bB6Ng01-007D21.g
ACCDH843874DH843875
length1451,032
definitionDH843874|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D21, 5' end.DH843875|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,129,218 - 35,129,362)(35,251,247 - 35,252,285)
sequence
gaattctgcagcttgaatcagtcaaactgttcagccaaaaatgtcttcac
tttttagagatcaaggaagcagctgttaaaaatctgaatccacacttagg
aagcactaaaacccaacaacgatagacacagccgggggggggggg
gaattcaaaacgagtccatcgggatctgaggctcacgcgtaggagggctc
acctccagagaaccgctcttcccatcggtgaatcataccggcacactccg
ggagaaaggggcaagagttaggctcagttccaagcgcgatgtcacaaggt
tatgcatcaacccgtaggcagcagctgtgtttggcaggggaagcttcctc
taattaggtattgctccctgtgggccatccagaaggacctttcttttctc
cgcagttattaatcagctatccagtattaacaagatcggatctggaagta
tgcaattcctctctccatctttcctcctaatcactcagcaggccacctta
ctagctagctcactaatgaggagctcggtgactgactaacaaattcaccc
tgttcctgtccttaatgatcacttgcgaaatgggatacttccgctacaga
ggcacaggccatttgaaatgctgaaatcatagcttttccgtggctttctg
gtaaaaccttatctaaattaggcaatgctaaaaaacgagtaattgaacat
gtatcacactgaggaaatgcctagctagtggacttttaaaaaaaaaaaaa
aaaaaaacacagatttaacacttggaagttgtctttctccagagactgag
tttcttttaacaaagtttcatccttccggagcctcgaggaaagaaaggaa
agtaatgggaacaagggagggtcagggaggagaaagatgaaggttggaga
aggagaatatggtcaaaatatgtgatatacttttcccttctttttattta
attgaaatatggtttttatacagtattttctcatggctccttcccttcac
tcctcccagatcctctccaccccatctccccatccattcaactccatgac
ttctttctctcttttagaaaccaacatatattttttccagactaaaagaa
accaacgaaagaaggctcaaaaatccatatatcttgtactcacgaggatg
cttaccaaacttataccattgaacctcataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_35129218_35129362
seq2: B6Ng01-007D21.b_36_180

seq1  GAATTCTGCAGCTTGAATCAGTCAAACTGTTCAGCCAAAAATGTCTTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGCTTGAATCAGTCAAACTGTTCAGCCAAAAATGTCTTCAC  50

seq1  TTTTTAGAGATCAAGGAAGCAGCTGTTAAAAATCTGAATCCACACTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAGATCAAGGAAGCAGCTGTTAAAAATCTGAATCCACACTTAGG  100

seq1  AAGCACTAAAACCCAACAACGATAGACACAGCCGGGGGGGGGGGG  145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTAAAACCCAACAACGATAGACACAGCCGGGGGGGGGGGG  145

seq1: chr8_35251247_35252285
seq2: B6Ng01-007D21.g_67_1098 (reverse)

seq1  TTTATGAGTTTCATGTGTATAAGTTTGTGTAAGCTTCTCTGTGTGTACAG  50
      |||||||| ||||   ||||||||||| |||||| ||   ||| ||||| 
seq2  TTTATGAGGTTCAATGGTATAAGTTTG-GTAAGCATCCTCGTGAGTACAA  49

seq1  TGTATATGGTTTTTTGGGCTCTCTTTCTGTTTGTTTTCTTTTAGTCTGG-  99
        ||||||| |||||| ||  ||||||   ||| ||||||||||||||| 
seq2  GATATATGGATTTTTGAGCCTTCTTTC--GTTGGTTTCTTTTAGTCTGGA  97

seq1  ATATATATATGTTTGTTTTCTAAAAAGAGAGAAAGAAGTCATGGAGTTGG  149
      | | ||||||| ||| ||||| ||||||||||||||||||||||||||| 
seq2  AAAAATATATG-TTGGTTTCT-AAAAGAGAGAAAGAAGTCATGGAGTTGA  145

seq1  ATGGATGGGGAGGTGGGGTGG-GAGGATCTGGGAGGAGATGAAGGGAAGG  198
      |||||||||||| |||||||| |||||||||||||||| |||||||||||
seq2  ATGGATGGGGAGATGGGGTGGAGAGGATCTGGGAGGAG-TGAAGGGAAGG  194

seq1  AAGCCATGAGAAAATACTGTATAAAAACCATACTTTCAATTAAATAAAAA  248
       ||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  -AGCCATGAGAAAATACTGTATAAAAACCATA-TTTCAATTAAAT-AAAA  241

seq1  AGAAGGGAAAAGTATATCACATATTTTGACCATATTCTCCTTCTCCAGCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAAGGGAAAAGTATATCACATATTTTGACCATATTCTCCTTCTCCAACC  291

seq1  TTCATCTTTCTCCTCCCTGACCCTCCCTTGTTCCCATTACTTTCC-TTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCATCTTTCTCCTCCCTGACCCTCCCTTGTTCCCATTACTTTCCTTTCT  341

seq1  TTCCTCGAGGCTCCGGAAGGATGAAACTTTGTTAAAAGAAACTCAGTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCGAGGCTCCGGAAGGATGAAACTTTGTTAAAAGAAACTCAGTCTC  391

seq1  TGGAGAAAGACAACTTCCAAGTGTTAAATCTGTGTTTTTTTTTTTTTTTT  447
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGAGAAAGACAACTTCCAAGTGTTAAATCTGTG-TTTTTTTTTTTTTTT  440

seq1  TTTTTAAAAGTCCACTAGCTAGGCATTTCCTCAGTGTGATACATGTTCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAGTCCACTAGCTAGGCATTTCCTCAGTGTGATACATGTTCAA  490

seq1  TTACTCGTTTTTTAGCATTGCCTAATTTAGATAAGGTTTTACCAGAAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCGTTTTTTAGCATTGCCTAATTTAGATAAGGTTTTACCAGAAAGC  540

seq1  CACGGAAAAGCTATGATTTCAGCATTTCAAATGGCCTGTGCCTCTGTAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGAAAAGCTATGATTTCAGCATTTCAAATGGCCTGTGCCTCTGTAGC  590

seq1  GGAAGTATCCCATTTCGCAAGTGATCATTAAGGACAGGAACAGGGTGAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTATCCCATTTCGCAAGTGATCATTAAGGACAGGAACAGGGTGAAT  640

seq1  TTGTTAGTCAGTCACCGAGCTCCTCATTAGTGAGCTAGCTAGTAAGGTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTCAGTCACCGAGCTCCTCATTAGTGAGCTAGCTAGTAAGGTGG  690

seq1  CCTGCTGAGTGATTAGGAGGAAAGATGGAGAGAGGAATTGCATACTTCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGAGTGATTAGGAGGAAAGATGGAGAGAGGAATTGCATACTTCCA  740

seq1  GATCCGATCTTGTTAATACTGGATAGCTGATTAATAACTGCGGAGAAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGATCTTGTTAATACTGGATAGCTGATTAATAACTGCGGAGAAAAG  790

seq1  AAAGGTCCTTCTGGATGGCCCACAGGGAGCAATACCTAATTAGAGGAAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCTTCTGGATGGCCCACAGGGAGCAATACCTAATTAGAGGAAGC  840

seq1  TTCCCCTGCCAAACACAGCTGCTGCCTACGGGTTGATGCATAACCTTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGCCAAACACAGCTGCTGCCTACGGGTTGATGCATAACCTTGTG  890

seq1  ACATCGCGCTTGGAACTGAGCCTAACTCTTGCCCCTTTCTCCCGGAGTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCGCTTGGAACTGAGCCTAACTCTTGCCCCTTTCTCCCGGAGTGT  940

seq1  GCCGGTATGATTCACCGATGGGAAGAGCGGTTCTCTGGAGGTGAGCCCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGTATGATTCACCGATGGGAAGAGCGGTTCTCTGGAGGTGAGCCCTC  990

seq1  CTACGCGTGAGCCTCAGATCCCGATGGACTCGTTTTGAATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCGTGAGCCTCAGATCCCGATGGACTCGTTTTGAATTC  1032