BAC Information

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BAC

Clone NameB6Ng01-007D24
Chromosome8 (Build37)
Map Location 117,434,948 - 117,604,846
singlet/doubletdoublet
Overlap geneWwox
Upstream geneNudt7, AI427515, Clec3a
Downstream geneMaf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007D24.bB6Ng01-007D24.g
ACCDH843880DH843881
length929895
definitionDH843880|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D24, 5' end.DH843881|Mus musculus domesticus DNA, BAC clone: B6Ng01-007D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,434,948 - 117,435,877)(117,603,953 - 117,604,846)
sequence
gaattcccctgaatactgaggaggaaattaagccaataaaaattttaaaa
attagcatgccaccatacctaaaagaagagcatctcagacccttgtctgc
ccctattaccaagctcaccctctcccactcggaagcgtgaaagactgtcc
actctgctcttgggcatgcactgtgcccgtgaccccctgctgcagaaacc
caatggcttggcgtgcagagccctctctgccgagggtgggctccgtcgcc
ggtcgctgggaaggcacattgttcgactccgagagcccacagtctaaaat
catcatcatgcattttcatcaggatgaaatatcgggcgctctgctcagcg
caaggttttattaatgatgcgctgtcagggctggacgttctgcatatttg
catattaaacagctgagtgaagaaacattccttttattgctgcagggaat
aaatcagtttaaagcaagctctcatcatttatactcctttcggctaagtc
ttcttttattgaaataaattgttgaagtgctttgctcattcttcgaatac
tgatgaaatttaccttgataggacccgaggagaaataatatttccttaaa
ggtgcagtattgtcccacttttccgcattactttaattcattattgataa
gttaatttagaaatatcaagcggaagggacagaaaaacaggtccgaacaa
agactgtttcctctggttgatgtttgccaattgcacctttattggcagag
cgcaataaaaagcagcatgggctccagagaggggctcagggctgaacgcc
tgctgttcacacagaagatctgagttccgggcccaacatatacagccacc
tgtaaccctcaacgcagggaacacagtaccgtaaccacacatatgtcaca
cacgtgcagacaagcagtgcgcgtgtgtg
gaattcacatcaaaactctttctgcagaacacacattctgcagccagttt
gactccatgaagttgcttacgattgcccttgcatattcaaactctctgac
cctctgcctctgtacaaacttttgttttcttgccaagctgtttcttccag
tctgtttcctcacatcctgaggctctttctgtcctgtctggggaaacggg
gcatggcgattttgaagatggagcctgagtgccagcctgaaggggaaagg
tgtccgtgcacaggagctatgggatgtgagcacactccagagagaaggga
tgtctcaggacctagaggagcaggtcaccctgcagaaggcattcctcaga
acctggtgctcactgaaaccggggtacccttctagaaagatcagcagcac
tgggctccttgctaaaggaacagagtggagctgcaccattgcaattgcgc
atccccctccccccaagccccaggtacaggccattctttttcgagacagg
gtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggc
tggcctcgaactcagaaatccgcctgcctctgcctcccgagtgctgggat
tagaggcatgagccacccccgcccggcaaggccattgtttacaaacagaa
atgcttctggttaaaagcctaactttgagcgtcccacagatgagtgaagc
tggaaaggaagtatctggggatccaatgctcatagattcccttaccacaa
aaggaagaccagcgctcatcaaccatctcacctgaagaggagcccatcca
taaagccactgaagagaagagacaggtgggagaaccatctgttggattcc
atagtgttgctgtgggatcagctagtcacagataacccaacctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117434948_117435877
seq2: B6Ng01-007D24.b_45_973

seq1  GAATTCCCCTGAATACTGAGGAGGAAATTAAGCCAATAAAAATTTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTGAATACTGAGGAGGAAATTAAGCCAATAAAAATTTTAAAA  50

seq1  ATTAGCATGCCACCATACCTAAAAGAAGAGCATCTCAGACCCTTGTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATGCCACCATACCTAAAAGAAGAGCATCTCAGACCCTTGTCTGC  100

seq1  CCCTATTACCAAGCTCACCCTCTCCCACTCGGAAGCGTGAAAGACTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTACCAAGCTCACCCTCTCCCACTCGGAAGCGTGAAAGACTGTCC  150

seq1  ACTCTGCTCTTGGGCATGCACTGTGCCCGTGACCCCCTGCTGCAGAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTCTTGGGCATGCACTGTGCCCGTGACCCCCTGCTGCAGAAACC  200

seq1  CAATGGCTTGGCGTGCAGAGCCCTCTCTGCCGAGGGTGGGCTCCGTCGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTTGGCGTGCAGAGCCCTCTCTGCCGAGGGTGGGCTCCGTCGCC  250

seq1  GGTCGCTGGGAAGGCACATTGTTCGACTCCGAGAGCCCACAGTCTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGCTGGGAAGGCACATTGTTCGACTCCGAGAGCCCACAGTCTAAAAT  300

seq1  CATCATCATGCATTTTCATCAGGATGAAATATCGGGCGCTCTGCTCAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATGCATTTTCATCAGGATGAAATATCGGGCGCTCTGCTCAGCG  350

seq1  CAAGGTTTTATTAATGATGCGCTGTCAGGGCTGGACGTTCTGCATATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTTATTAATGATGCGCTGTCAGGGCTGGACGTTCTGCATATTTG  400

seq1  CATATTAAACAGCTGAGTGAAGAAACATTCCTTTTATTGCTGCAGGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAAACAGCTGAGTGAAGAAACATTCCTTTTATTGCTGCAGGGAAT  450

seq1  AAATCAGTTTAAAGCAAGCTCTCATCATTTATACTCCTTTCGGCTAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTTAAAGCAAGCTCTCATCATTTATACTCCTTTCGGCTAAGTC  500

seq1  TTCTTTTATTGAAATAAATTGTTGAAGTGCTTTGCTCATTCTTCGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATTGAAATAAATTGTTGAAGTGCTTTGCTCATTCTTCGAATAC  550

seq1  TGATGAAATTTACCTTGATAGGACCCGAGGAGAAATAATATTTCCTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAAATTTACCTTGATAGGACCCGAGGAGAAATAATATTTCCTTAAA  600

seq1  GGTGCAGTATTGTCCCACTTTTCCGCATTACTTTAATTCATTATTGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGTATTGTCCCACTTTTCCGCATTACTTTAATTCATTATTGATAA  650

seq1  GTTAATTTAGAAATATCAAGCGGAAGGGACAGAAAAACAGGTCCGAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTAGAAATATCAAGCGGAAGGGACAGAAAAACAGGTCCGAACAA  700

seq1  AGACTGTTTCCTCTGGTTGATGTTTGCCAATTGCACCTTTATTGGCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTTTCCTCTGGTTGATGTTTGCCAATTGCACCTTTATTGGCAGAG  750

seq1  CGCAATAAAAAGCAGCAGGGGCTCCAGAGAGGGGCTCAGGGCTGAACGCC  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CGCAATAAAAAGCAGCATGGGCTCCAGAGAGGGGCTCAGGGCTGAACGCC  800

seq1  TGCTGTTCACACAGAAGATCTGAGTTCCGGGCCCAACATATACAGCCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCACACAGAAGATCTGAGTTCCGGGCCCAACATATACAGCCACC  850

seq1  TGTAACCCTCAACGCAGGGAACACAGTACCGTAACCACACATATGTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCCTCAACGCAGGGAACACAGTACCGTAACCACACATATGTCACA  900

seq1  CACGTGCAGACAAGCAGGTGCGCGTGTGTG  930
      |||||||||||||||| |||||||||||||
seq2  CACGTGCAGACAAGCA-GTGCGCGTGTGTG  929

seq1: chr8_117603953_117604846
seq2: B6Ng01-007D24.g_68_962 (reverse)

seq1  GCAGGTT-GGTTATCTGTGACTAGCTGAT-CCACAGCAACACTATGGAAT  48
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  GCAGGTTGGGTTATCTGTGACTAGCTGATCCCACAGCAACACTATGGAAT  50

seq1  CCAACAGATGGTTCTCCCACCTGTCTCTTCTCTTCAGTGGCTTTATGGAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGATGGTTCTCCCACCTGTCTCTTCTCTTCAGTGGCTTTATGGAT  100

seq1  GGGCTCCTCTTCAGGTGAGATGGTTGATGAGCGCTGGTCTTCCTTTTGTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTCTTCAGGTGAGATGGTTGATGAGCGCTGGTCTTCCTTTTGTG  150

seq1  GTAAGGGAATCTATGAGCATTGGATCCCCAGATACTTCCTTTCCAGCTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGAATCTATGAGCATTGGATCCCCAGATACTTCCTTTCCAGCTTC  200

seq1  ACTCATCTGTGGGACGCTCAAAGTTAGGCTTTTAACCAGAAGCATTTCTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTGTGGGACGCTCAAAGTTAGGCTTTTAACCAGAAGCATTTCTG  250

seq1  TTTGTAAACAATGGCCTTGCCGGGCGGGGGTGGCTCATGCCTCTAATCCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACAATGGCCTTGCCGGGCGGGGGTGGCTCATGCCTCTAATCCC  300

seq1  AGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTG  350

seq1  GTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGT  400

seq1  CTCGAAAAAGAATGGCCTGTACCTGGGGCTTGGGGGGGAGGGGGATGCGC  448
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTCGAAAAAGAATGGCCTGTACCTGGGGCTT-GGGGGGAGGGGGATGCGC  449

seq1  AATTGCAATGGTGCAGCTCCACTCTGTTCCTTTAGCAAGGAGCCCAGTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAATGGTGCAGCTCCACTCTGTTCCTTTAGCAAGGAGCCCAGTGC  499

seq1  TGCTGATCTTTCTAGAAGGGTACCCCGGTTTCAGTGAGCACCAGGTTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATCTTTCTAGAAGGGTACCCCGGTTTCAGTGAGCACCAGGTTCTG  549

seq1  AGGAATGCCTTCTGCAGGGTGACCTGCTCCTCTAGGTCCTGAGACATCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCCTTCTGCAGGGTGACCTGCTCCTCTAGGTCCTGAGACATCCC  599

seq1  TTCTCTCTGGAGTGTGCTCACATCCCATAGCTCCTGTGCACGGACACCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGGAGTGTGCTCACATCCCATAGCTCCTGTGCACGGACACCTT  649

seq1  TCCCCTTCAGGCTGGCACTCAGGCTCCATCTTCAAAATCGCCATGCCCCG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCAGGCTGGCACTCAGGCTCCATCTTCAAAATCGCCATGCCCCG  699

seq1  TTTCCCCAGACAGGACAGAAAGAGCCTCAGGATGTGAGGAAACAGACTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCAGACAGGACAGAAAGAGCCTCAGGATGTGAGGAAACAGACTGG  749

seq1  AAGAAACAGCTTGGCAAGAAAACAAAAGTTTGTACAGAGGCAGAGGGTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGCTTGGCAAGAAAACAAAAGTTTGTACAGAGGCAGAGGGTCA  799

seq1  GAGAGTTTGAATATGCAAGGGCAATCGTAAGCAACTTCATGGAGTCAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTGAATATGCAAGGGCAATCGTAAGCAACTTCATGGAGTCAAAC  849

seq1  TGGCTGCAGAATGTGTGTTCTGCAGAAAGAGTTTTGATGTGAATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCAGAATGTGTGTTCTGCAGAAAGAGTTTTGATGTGAATTC  895