BAC Information

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BAC

Clone NameB6Ng01-007G15
Chromosome9 (Build37)8 (Build37)
Map Location 32,914,425 - 32,914,462104,304,280 - 104,305,343
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGrit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Downstream geneLOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007G15.bB6Ng01-007G15.g
ACCDH843989DH843990
length2301,055
definitionDH843989|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G15, 5' end.DH843990|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,914,425 - 32,914,462)(104,304,280 - 104,305,343)
sequence
gaattctacaagaacaatgagctatacaaccataagatatatgcagaggt
tccctgatacctgcaagcttacttgattctgtggactatgttctcatggt
gcccttgatcactctggctcctccaatagttcctcctcctcctcctcctc
ttcctcttccacctcctcctccacctcttcctcttcatcttccacttctt
cttcttcttcctcatcttcttcttcatatt
gaattcacagcacttgactatttccaagcatttggccagtggcattgtat
atctctactccagaatcctgtgtcagaaagttgatgttgtctgaattgag
gggcaagtactgcttttgtggtagcatgtttctttaaaagtaaagtattg
caaaacagtgtggcaatttcatctcagtgaaaccaaaataaactaaatct
catgttttatttctgcaggattctataagaatgttactgtgttactgtgg
tggagttatcatctccactgatgagcatacatttagtcacagctgctaat
aatctcaaggaatgtattgattataaattaataaatatacaaatattcat
gccaaatatgggtcacataccttgttctgatattcctttatatctccagt
gtatacaggtatgtcctgctctctcaaaaggcctttgtttctatgggaat
aaacaggcattaatcaatgtgcacacaaataaacttctaaaatgagataa
gttcatcaacgaaaagagtccatgctgtgaacactgagaccaagggagtt
tacacgtgagaacaatacagaagacattttaataaagttatatgataaga
aatatagaaaactgagcatgaatataaaacattcaagcgaaagtaattca
aagcaaggagaatgatatccacaggcacaaaatactagctgttaagaggg
atataacctcttctttagatctgaaataaagtacaaaaaaaaaaatcagt
aaaatcaaacaaacttgagggcaaaggctgagggagagtaactgcaaaga
ctttattgtcattttaaatccacattagttagagcgacacttcaattcct
gtttgactactaagttcttatagtgagttctttattcaacagaatcttgg
tggacaagatactgttcttgaaggctaatataatcatagacctctgtctg
aactgcgtctcacctttctctgcctctcctgatctcaggaactgttctgg
gtcgggacttcaagacatattcatcctgtctaaggtattggctatgcctg
tatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32914425_32914462
seq2: B6Ng01-007G15.b_171_271 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  AATATGAAGAAGAAGATGAGGAAGAAGAAGAAGAAGTGGAAGATGAAGAG  50

seq1  -------------AATATGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGA  37
                   |  | |  ||||| |||||||||||||||||||||||
seq2  GAAGAGGTGGAGGAGGAGGTGGAAGAGGAAGAGGAGGAGGAGGAGGAGGA  100

seq1  A  38
      |
seq2  A  101

seq1: chr8_104304280_104305343
seq2: B6Ng01-007G15.g_65_1119

seq1  GAATTCACAGCACTTGACTATTTCCAAGCATTTGGCCAGTGGCATTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCACTTGACTATTTCCAAGCATTTGGCCAGTGGCATTGTAT  50

seq1  ATCTCTACTCCAGAATCCTGTGTCAGAAAGTTGATGTTGTCTGAATTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACTCCAGAATCCTGTGTCAGAAAGTTGATGTTGTCTGAATTGAG  100

seq1  GGGCAAGTACTGCTTTTGTGGTAGCATGTTTCTTTAAAAGTAAAGTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGTACTGCTTTTGTGGTAGCATGTTTCTTTAAAAGTAAAGTATTG  150

seq1  CAAAACAGTGTGGCAATTTCATCTCAGTGAAACCAAAATAAACTAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGTGTGGCAATTTCATCTCAGTGAAACCAAAATAAACTAAATCT  200

seq1  CATGTTTTATTTCTGCAGGATTCTATAAGAATGTTACTGTGTTACTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTATTTCTGCAGGATTCTATAAGAATGTTACTGTGTTACTGTGG  250

seq1  TGGAGTTATCATCTCCACTGATGAGCATACATTTAGTCACAGCTGCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTATCATCTCCACTGATGAGCATACATTTAGTCACAGCTGCTAAT  300

seq1  AATCTCAAGGAATGTATTGATTATAAATTAATAAATATACAAATATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAAGGAATGTATTGATTATAAATTAATAAATATACAAATATTCAT  350

seq1  GCCAAATATGGGTCACATACCTTGTTCTGATATTCCTTTATATCTCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATATGGGTCACATACCTTGTTCTGATATTCCTTTATATCTCCAGT  400

seq1  GTATACAGGTATGTCCTGCTCTCTCAAAAGGCCTTTGTTTCTATGGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAGGTATGTCCTGCTCTCTCAAAAGGCCTTTGTTTCTATGGGAAT  450

seq1  AAACAGGCATTAATCAATGTGCACACAAATAAACTTCTAAAATGAGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCATTAATCAATGTGCACACAAATAAACTTCTAAAATGAGATAA  500

seq1  GTTCATCAACGAAAAGAGTCCATGCTGTGAACACTGAGACCAAGGGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCAACGAAAAGAGTCCATGCTGTGAACACTGAGACCAAGGGAGTT  550

seq1  TACACGTGAGAACAATACAGAAGACATTTTAATAAAGTTATATGATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGTGAGAACAATACAGAAGACATTTTAATAAAGTTATATGATAAGA  600

seq1  AATATAGAAAACTGAGCATGAATATAAAACATTCAAGCGAAAGTAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAAAACTGAGCATGAATATAAAACATTCAAGCGAAAGTAATTCA  650

seq1  AAGCAAGGAGAATGATATCCACAGGCACAAAATACTAGCTGTTAAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGAGAATGATATCCACAGGCACAAAATACTAGCTGTTAAGAGGG  700

seq1  ATATAACCTCTTC-TTAGATCTGAAATAAAGTACAAAAAAAAAAATCAGT  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATAACCTCTTCTTTAGATCTGAAATAAAGTACAAAAAAAAAAATCAGT  750

seq1  AAAATCAAACAAACTTGAGGGCAAAGGCTGAGGGAGAGTAACTGCAAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAACAAACTTGAGGGCAAAGGCTGAGGGAGAGTAACTGCAAAGA  800

seq1  CATTATTGTCATTTTAAATCCACATTAGTTAGAGCGACACTTCAATTCCT  849
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGTCATTTTAAATCCACATTAGTTAGAGCGACACTTCAATTCCT  850

seq1  GTTTGACTACT-AGTTCTTATAGTGAGTTCTTTATTCAACAGAATCTTGG  898
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACTACTAAGTTCTTATAGTGAGTTCTTTATTCAACAGAATCTTGG  900

seq1  TGGACAAAGATAACTGTTCTTGAAGGCTAATATAATCATAGACCTCTGTC  948
      ||||| ||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGGAC-AAGAT-ACTGTTCTTGAAGGCTAATATAATCATAGACCTCTGTC  948

seq1  TGTATCTGCGTCTCCACCTTTCTCTGCCTCCTCCTGATCTCAGTGAAACT  998
      || | |||||||| ||||||||||||||| ||||||||||||  | ||||
seq2  TG-AACTGCGTCT-CACCTTTCTCTGCCT-CTCCTGATCTCA--GGAACT  993

seq1  GCTTCTGGGTCGGTACTTCTAAGACATATTCATCCTGTCTTAGGTCATTG  1048
      | ||||||||||| ||||| |||||||||||||||||||| |||| ||||
seq2  G-TTCTGGGTCGGGACTTC-AAGACATATTCATCCTGTCTAAGGT-ATTG  1040

seq1  GCTATTGCCTGTATCA  1064
      |||| |||||||||||
seq2  GCTA-TGCCTGTATCA  1055