BAC Information

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BAC

Clone NameB6Ng01-007G18
Chromosome8 (Build37)
Map Location 65,799,622 - 65,800,372
singlet/doubletsinglet
Overlap geneSpock3
Upstream geneLOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495, Tll1, LOC100040989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007G18.bB6Ng01-007G18.g
ACCDH843995DH843996
length1,2101,056
definitionDH843995|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G18, 5' end.DH843996|Mus musculus domesticus DNA, BAC clone: B6Ng01-007G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaataaaagactcaaatggagctttatatcttaatatgcctt
aaacaactcaatggttgggccactctcaaacctacacagggttaataccc
cctctctgatattcctgagttattacttaataaaacctatattcatcttt
gctgctctagacccatttggggatactggggacactctttcccagctctt
acatgatcactgttgtgggaaatgttaaaaaatgaacccaccaactctcc
atggtgtcagaccacacttctgtgctcctgctgacccaccaactctccag
ccacactggaccacagggcttctgccaggccatctttccagcagggatct
ctgagttcctctcactaccatacacctcatggtcagctatcacatcacaa
tacccagtactctggtagaatcaagactcataatgcttaattaaccactc
agacttatgtatcaaatatatcacaatttacaagatgccaatacaaaaat
ttcagagacaactgataatgataaaagctttatcccaatatttctaacct
tgtgaacacatagctacttgtggctggaaaatggcatgtggatacacagc
catcttgattcccctcctctgtctctctgtctgtctctctgtctctctgt
ctgtctctctgtctctctctctctctctctctctaactcttagctcctcc
acctttccctgtccaatcacaggcctcccactgtcctaacatgattggac
agggaaaatcatgcaacagattactgtctctctgtcttatatttctcaag
cctgatcctttcctggcaatggagtttctacctccttcctttttaattcc
ccttgtccatgaatcataaagttccacctctgtctccctgcctaaccact
ggctgttggcatctttatttaccaatcaaagccaactggtggtagggacc
ttcacacttacatgcagattcttgtgcaagtttggggacccaataacata
ataaaagcattagaccaaatcgacaacatttccatagtcacaaagagtta
acaacaagaagcccagcaggagcttaatttccttgaaaaggaattaatat
ctgtcacaatggaggagggatctggagagtgatttggggaagtttctcga
ccttatgcgcagattctctcaccggaattctcttcgcaagcctattgtct
ctccactgta
gaattcccatatgaatctgaaatttgtcctttgaagatatgtgatgaatt
ctgatgtaatttggataaggattgcactgaatctgtagattgtttttggt
cattgcttttggccattttttttttttctattttaatcctacagaccatg
aacgtggaaaatcttttcatcttctaatatttttcaatttctttctttag
gttttcttgtctttaagtttttattatgagtctttcacttactttgttag
aatcagcccaagatttttaatgttttttgttgctattatgaaaggtgtca
tttttctaatttctggctaggatcatttgtcatttgtatgtaggaaagct
actgatttgtgtacattaacttgtacctgagactttgctgagagatcatc
agctgttggagtttcttggtggaattgttaggctcctctatgcatacaat
cgtaccgtaatctgcaaggaagattctttgacttcttctgttcctgtttg
tattactttgatatccttcagttgtcttattgttctagctaagactatat
taagtaagtacggagagaaaggatgaccttgtattctacgtgatttcagt
gaaattatttgaggttctctccatttaagttgatattggctattggctat
aaatcatcccctattaatttgatgtttgtaccttgtgttcttagtatctt
caggattttaatcacgaagggtttagattttgccaaaggtcttttctgta
tcttctgagacaatcattttggtttttgctttgagtctttttatgtagta
gattgcatttattgaagtatctcatttatctaaacaccaaacttgaatag
tgaatccctcctttaatcagattctcttccatctttctgtgatacagtca
tctgatgatttagactaaatctgtatgatgttaaaactaataattttcat
caaatactatgtcttgatgagtggaatttctagtgaattatcatttaaaa
tataatacttcataaggttatgccttgaatacttgggtaatttaggcttg
gaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65799622_65800372
seq2: B6Ng01-007G18.g_380_1117

seq1  AGGATCATTTGTCATTTGTATGTAGGAAAGCTACTGATTTGTGTACATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCATTTGTCATTTGTATGTAGGAAAGCTACTGATTTGTGTACATTA  50

seq1  ACTTGTACCTGAGACTTTGCTGAGAGATCATCAGCTGTTGGAGTTTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTACCTGAGACTTTGCTGAGAGATCATCAGCTGTTGGAGTTTCTTG  100

seq1  GTGGAATTGTTAGGCTCCTCTATGCATACAATCGTACCGTAATCTGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTGTTAGGCTCCTCTATGCATACAATCGTACCGTAATCTGCAAG  150

seq1  GAAGATTCTTTGACTTCTTCTGTTCCTGTTTGTATTACTTTGATATCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTCTTTGACTTCTTCTGTTCCTGTTTGTATTACTTTGATATCCTT  200

seq1  CAGTTGTCTTATTGTTCTAGCTAAGACTATATTAAGTAAGTACGGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCTTATTGTTCTAGCTAAGACTATATTAAGTAAGTACGGAGAGA  250

seq1  AAGGATGACCTTGTATTCTACGTGATTTCAGTGAAATTATTTGAGGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGACCTTGTATTCTACGTGATTTCAGTGAAATTATTTGAGGTTCT  300

seq1  CTCCATTTAAGTTGATATTGGCTATTGGCTATAAATCATCCCCTATTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTAAGTTGATATTGGCTATTGGCTATAAATCATCCCCTATTAAT  350

seq1  TTGATGTTTGTACCTTGTGTTCTTAGTATCTTCAGGATTTTAATCACGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTTGTACCTTGTGTTCTTAGTATCTTCAGGATTTTAATCACGAA  400

seq1  GGGTTTAGATTTTGCCAAAGGTCTTTTCTGTATCTTCTGAGACAATCA-T  449
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGGTTTAGATTTTGCCAAAGGTCTTTTCTGTATCTTCTGAGACAATCATT  450

seq1  TTGGTTTTTGCTTTGAGTCTTTTTATGTAGTAGATTGCATTTATTGAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTGCTTTGAGTCTTTTTATGTAGTAGATTGCATTTATTGAAGT  500

seq1  ATCTCATTTATCTAAAACACCAAACTTGAATAGTGAATCCTTCCTTTAAT  549
      ||||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  ATCTCATTTATCT-AAACACCAAACTTGAATAGTGAATCCCTCCTTTAAT  549

seq1  CAGATTCCCTTCCATCTTTCTGTGATACAGTCATCTGATGAATTTAAGAC  599
      ||||||| |||||||||||||||||||||||||||||||||  || ||||
seq2  CAGATTCTCTTCCATCTTTCTGTGATACAGTCATCTGATGA--TTTAGAC  597

seq1  TAAATCTGTATGATGTTAAAACTAATAATTTTCCATCAAATACTATGTCT  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAATCTGTATGATGTTAAAACTAATAATTTT-CATCAAATACTATGTCT  646

seq1  GTGATGAGTGGAAATTCTAGTGAAATTAATCATTTAAAAATATTAATACT  699
       |||||||||||| ||||||||||  | ||||||| |||||| |||||||
seq2  -TGATGAGTGGAATTTCTAGTGAA--TTATCATTT-AAAATA-TAATACT  691

seq1  TCATTAGGTTATGCCATTTGAATAACTTGGTTAATTTTAGGCTTGAAAAA  749
      |||| ||||||||||  |||||| |||||| ||| |||||||||| ||| 
seq2  TCATAAGGTTATGCC--TTGAAT-ACTTGGGTAA-TTTAGGCTTGGAAAC  737

seq1  CC  751
      | 
seq2  C-  738