BAC Information

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BAC

Clone NameB6Ng01-007J14
Chromosome8 (Build37)
Map Location 32,518,148 - 32,642,360
singlet/doubletdoublet
Overlap geneLOC100041329
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik
Downstream geneEG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007J14.bB6Ng01-007J14.g
ACCDH844119DH844120
length1,155946
definitionDH844119|Mus musculus domesticus DNA, BAC clone: B6Ng01-007J14, 5' end.DH844120|Mus musculus domesticus DNA, BAC clone: B6Ng01-007J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,641,185 - 32,642,360)(32,518,148 - 32,518,666)
sequence
gaattcatgctatctatagcaattaagatgacactcatagtaatcaggct
tatgactgggaggggaaacaatggctagaaatggccacactttagtccat
aacattgagcaaacatggcaaagaggatcagagattcctgaatgcattat
atcaatttctgttgctaataacacaatgccacaagtaggttatgaacatg
ggctcatagttctggaggttcaaggtcaaggggactcatcatatggcctt
gtggttggtagagtctcaatacagtgaagatatcttgtgatgagagtgac
agggaacccacatgtacatctttgttgtctcccactcttcttctggagcc
actacagccaacacagagctctaccttgatgaccttgtttaaacctagca
ctgcaaaggccttcctgtcctctaatcatgacagtttatgtttctcgacc
tctttatacctcataatagggattgaacatcaacatgagctttggtgaga
aaatgcctctttcaaacaataacatagaatgatttttgatagccacctat
tttttaaagaatatctgtcattatctcaaaatacataaaaatacctaaat
cataaacctaaatcaaagcataaataataacatttctagaggaaaataag
gacaacttctattgatattaggttttggcaaggcttctgaaataggacaa
aaagcacattataaaggaaatacaaataggatttaccaatattattcttc
tccttttaaaaagatattgcttttgcaaaccacacacacacacacacaca
cacacacacacacacacacaaaatcaagaaaaaggaagaccaaagagtgg
atacttcattccttcttagaatagggaacaatatacccatggaaggaatt
acagagacaaagtttggagcggagacgaaaggatggaccatccagagact
gccccactggggatctatccataatccatcaccaacccagaacactattg
catactcagcagatttgctgaaggaccctgaaatagctgtctctataagc
ttgcagtgctagaaatacaaatggatgctcatgtcatctatagatgaaca
cgagcccgattgaggacttaacaaagtacctagggacctgaagggatctg
caacc
gaattccataaaaaaatctagctatcaatatattgatttcaaatattccc
tcctggtctgtacattatcacacactcaaatgaatgtttctgttgctgta
cagaagctatgtttgaaaattcatacaattttctgcttttacctttaatt
tctgtagtctttacttttccatataagttttagaaatggtatatcagtat
ctaaaacgattggggagttgatcagcattgctttggatctacagatcaag
ttgtagagaactggtgagaactgccattttagcaatgctgaattgtcctg
tttcttttcatttattctttgtgtgaactgtttgtttgaatgttagagtt
tttctcattcacatcttgggtatactatgacaaatttgtatcttagtttt
tttctaatttcagggttgtcactataaatacatgtgttaattttaagttt
taattgttggcacataggaaaataatttctgcacactgatcttttgtctc
tattgcacttcattatgtctaaagagtacattcttttggaattttctact
tagctaatcactctgcaaacaaagacagttttttccaatttatatatact
ttagttctgtttcttatctgaatcacattaggtcaatttgcagtgtaata
ttaaatagaaatggtgaattgttcttagttgtaaggagaaagcagttaat
ttctggtccacaagtgagatattatccatggggttttatatatgttttct
gaggcccttatatttctggttttctgagggatttttttgttgttttgttt
ttcgagacagggttctctgtatagccctggctgtctcagaactcactctg
tagaccaggctgccttgaactcagaaatccgcctgcctctacctccaagt
gctgggattaaaggcatgcaccacaccgccatctttctaaggattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32641185_32642360
seq2: B6Ng01-007J14.b_42_1196 (reverse)

seq1  GGTTGCAGATCCCTTCAGCTCCTTGGGTACTTTGTCTAGCTCCTCCATCG  50
      |||||||||||||||||| ||| | |||||||||| ||  ||||| ||| 
seq2  GGTTGCAGATCCCTTCAGGTCCCTAGGTACTTTGT-TAAGTCCTCAATC-  48

seq1  GGGGCTCTGTGTTCCATCTAATAGATGACAATGAGCATCCACATCTGTAT  100
       |||||| ||||| ||||| ||||||||| |||||||||  ||| |||| 
seq2  -GGGCTC-GTGTT-CATCT-ATAGATGAC-ATGAGCATC--CATTTGTA-  90

seq1  TTTCTAGGCACTGGCATAGCCTTATATGAGACAGCTATATCAGGGTCCTT  150
      |||||| ||||| ||| || |||||| ||||||||||| ||||||||| |
seq2  TTTCTA-GCACT-GCA-AG-CTTATA-GAGACAGCTATTTCAGGGTCC-T  134

seq1  TCAGCAAAATCTTGCTGGCGTATGCAATAGTG-TCTGGGTTTGGTGATGG  199
      ||||| ||||| |||| | ||||||||||||| |||||| ||||||||||
seq2  TCAGC-AAATC-TGCT-GAGTATGCAATAGTGTTCTGGG-TTGGTGATGG  180

seq1  ATTATGGGATAGATCCCCAGGTGGGGCAGTCTCTGGATGGTCCATCCTTT  249
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTAT-GGATAGATCCCCA-GTGGGGCAGTCTCTGGATGGTCCATCCTTT  228

seq1  CGTCTCCGCTCCAAACTTTGTCTCTGTAATTCCTTCCATGGGTATATTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCGCTCCAAACTTTGTCTCTGTAATTCCTTCCATGGGTATATTGT  278

seq1  TCCCTATTCTAAGAAGGAATGAAGTATCCACTCTTTGGTCTTCCTTCTTC  349
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCCTATTCTAAGAAGGAATGAAGTATCCACTCTTTGGTCTTCCTTTTTC  328

seq1  TTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTT  378

seq1  TGCAAAAGCAATATCTTTTTAAAAGGAGAAGAATAATATTGGTAAATCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAGCAATATCTTTTTAAAAGGAGAAGAATAATATTGGTAAATCCT  428

seq1  ATTTGTATTTCCTTTATAATGTGCTTTTTGTCCTATTTCAGAAGCCTTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTTCCTTTATAATGTGCTTTTTGTCCTATTTCAGAAGCCTTGC  478

seq1  CAAAACCTAATATCAATAGAAGTTGTCCTTATTTTCCTCTAGAAATGTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTAATATCAATAGAAGTTGTCCTTATTTTCCTCTAGAAATGTTA  528

seq1  TTATTTATGCTTTGATTTAGGTTTATGATTTAGGTATTTTTATGTATTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATGCTTTGATTTAGGTTTATGATTTAGGTATTTTTATGTATTTT  578

seq1  GAGATAATGACAGATATTCTTTAAAAAATAGGTGGCTATCAAAAATCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATGACAGATATTCTTTAAAAAATAGGTGGCTATCAAAAATCATT  628

seq1  CTATGTTATTGTTTGAAAGAGGCATTTTCTCACCAAAGCTCATGTTGATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTATTGTTTGAAAGAGGCATTTTCTCACCAAAGCTCATGTTGATG  678

seq1  TTCAATCCCTATTATGAGGTATAAAGAGGTCGAGAAACATAAACTGTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCCCTATTATGAGGTATAAAGAGGTCGAGAAACATAAACTGTCAT  728

seq1  GATTAGAGGACAGGAAGGCCTTTGCAGTGCTAGGTTTAAACAAGGTCATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAGGACAGGAAGGCCTTTGCAGTGCTAGGTTTAAACAAGGTCATC  778

seq1  AAGGTAGAGCTCTGTGTTGGCTGTAGTGGCTCCAGAAGAAGAGTGGGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGAGCTCTGTGTTGGCTGTAGTGGCTCCAGAAGAAGAGTGGGAGA  828

seq1  CAACAAAGATGTACATGTGGGTTCCCTGTCACTCTCATCACAAGATATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGATGTACATGTGGGTTCCCTGTCACTCTCATCACAAGATATCT  878

seq1  TCACTGTATTGAGACTCTACCAACCACAAGGCCATATGATGAGTCCCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTATTGAGACTCTACCAACCACAAGGCCATATGATGAGTCCCCTT  928

seq1  GACCTTGAACCTCCAGAACTATGAGCCCATGTTCATAACCTACTTGTGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAACCTCCAGAACTATGAGCCCATGTTCATAACCTACTTGTGGC  978

seq1  ATTGTGTTATTAGCAACAGAAATTGATATAATGCATTCAGGAATCTCTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTATTAGCAACAGAAATTGATATAATGCATTCAGGAATCTCTGA  1028

seq1  TCCTCTTTGCCATGTTTGCTCAATGTTATGGACTAAAGTGTGGCCATTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGCCATGTTTGCTCAATGTTATGGACTAAAGTGTGGCCATTTC  1078

seq1  TAGCCATTGTTTCCCCTCCCAGTCATAAGCCTGATTACTATGAGTGTCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTGTTTCCCCTCCCAGTCATAAGCCTGATTACTATGAGTGTCAT  1128

seq1  CTTAATTGCTATAGATAGCATGAATTC  1176
      |||||||||||||||||||||||||||
seq2  CTTAATTGCTATAGATAGCATGAATTC  1155

seq1: chr8_32518148_32518666
seq2: B6Ng01-007J14.g_66_584

seq1  GAATTCCATAAAAAAATCTAGCTATCAATATATTGATTTCAAATATTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAAAAATCTAGCTATCAATATATTGATTTCAAATATTCCC  50

seq1  TCCTGGTCTGTACATTATCACACACTCAAATGAATGTTTCTGTTGCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTCTGTACATTATCACACACTCAAATGAATGTTTCTGTTGCTGTA  100

seq1  CAGAAGCTATGTTTGAAAATTCATACAATTTTCTGCTTTTACCTTTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTATGTTTGAAAATTCATACAATTTTCTGCTTTTACCTTTAATT  150

seq1  TCTGTAGTCTTTACTTTTCCATATAAGTTTTAGAAATGGTATATCAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTCTTTACTTTTCCATATAAGTTTTAGAAATGGTATATCAGTAT  200

seq1  CTAAAACGATTGGGGAGTTGATCAGCATTGCTTTGGATCTACAGATCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACGATTGGGGAGTTGATCAGCATTGCTTTGGATCTACAGATCAAG  250

seq1  TTGTAGAGAACTGGTGAGAACTGCCATTTTAGCAATGCTGAATTGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAGAACTGGTGAGAACTGCCATTTTAGCAATGCTGAATTGTCCTG  300

seq1  TTTCTTTTCATTTATTCTTTGTGTGAACTGTTTGTTTGAATGTTAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCATTTATTCTTTGTGTGAACTGTTTGTTTGAATGTTAGAGTT  350

seq1  TTTCTCATTCACATCTTGGGTATACTATGACAAATTTGTATCTTAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATTCACATCTTGGGTATACTATGACAAATTTGTATCTTAGTTTT  400

seq1  TTTCTAATTTCAGGGTTGTCACTATAAATACATGTGTTAATTTTAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAATTTCAGGGTTGTCACTATAAATACATGTGTTAATTTTAAGTTT  450

seq1  TAATTGTTGGCACATAGGAAAATAATTTCTGCACACTGATCTTTTGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTTGGCACATAGGAAAATAATTTCTGCACACTGATCTTTTGTCTC  500

seq1  TATTGCACTTCATTATGTC  519
      |||||||||||||||||||
seq2  TATTGCACTTCATTATGTC  519