BAC Information

Click to search

BAC

Clone NameB6Ng01-007O06
Chromosome8 (Build37)
Map Location 58,907,012 - 59,064,440
singlet/doubletdoublet
Overlap geneLOC664948, BC088983, Fbxo8, LOC100040431
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd
Downstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007O06.bB6Ng01-007O06.g
ACCDH844327DH844328
length1,114856
definitionDH844327|Mus musculus domesticus DNA, BAC clone: B6Ng01-007O06, 5' end.DH844328|Mus musculus domesticus DNA, BAC clone: B6Ng01-007O06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,063,316 - 59,064,440)(58,907,012 - 58,907,681)
sequence
gaattctaaaacatgtatgttaggtaatcaaaacagaccacaatggtttt
ggtcttgtgataaggctccaagccataaagatacacttagcagttaaatg
attggtcaaagtaggtggtccttagaagtatttctaaggaaaagttactg
tgaaggtaaatataattggtatagaaaaccagcattatgcccaatattta
ctcataatgttcatactaatatcaattttttttgtttactgtttgattgt
tttttgtttttcaagacaggctttctctccatgtgtagccctggctgtcc
tggaactcactttgtagaccaggctgaccttgaactcagaaatttgcctg
cctctgccttcaaagtgctgagattaaagatgtgtgcaccaccacccagc
ttaaaagtctgctgctttctatttgcttcaaaaaatattcttgccaggat
ttactcttaaaggaggcctgaaggctactgatgggctcaggcaccgtgac
tcactggagtcatctaatcaaccccaaagaattagaggcctttaagaaaa
tatccatttaagcttcatacttacatataatatcggatacctagagattg
ctttataaaacagacacacatgcatatttacatatctctctatacatatg
accttagagctttacataggtacagtattgagtaaaagacactgagtagt
gtaagacaagtattttagccaaagaaaatttaaggtttttttgtggtgat
gacataggtgtataaataactagaatatatccataagacaaattaatgat
acaagatggttgaagaaagcttaaatgaacatgtaaaataagcatttttt
aacagtcaatgctagaacaattactaagagctaggacacttggataagat
tgagggagttgaaagtctcaatagctttaatgaagaacaactgaagaagc
agttttacttttctgtatcatgagagcaaaggtaaggcaggaaacaaagt
tgggctctttcagaaagtagtttagaactgaatttagatggtactgactt
ttttggcaagatcttatgtctagccacatatagcaaaacctctgaaggct
tattatcaaagtaa
gaattcaacttttaatatagtcattacttcagatatttatttttatcaaa
aactcttcctttagaagcttagatacccttaataatgtccttaagcaatt
ttagtggcctatgaaacaaatttaatatgctcaagtatgatagttttagt
agatattaagaagtatatatagggtaggaaacaggaggaaccattagaaa
gtcccagatgccaggaaagggagagtttcccaggacctaaaaggaatgac
agctgaaatacccaatagagggagatagaaactgaacaaaccacctccag
ttgagggatgggacaatccacccatctcaattttttttttaatccagaat
tgttcctgtccaaaggaaacagagggacaaaaactggagcagagactgaa
ggaaatgccatccagagactagcccaccttgggattcatcccatctgcag
ataccaaacccagatacaattgctgatgccatgaagtgcttgcagacaga
agcctggtatggatgttccctgagaggttctgccagcacctcacctacac
agatgcagatactcacagtcaaccatcagactgagtccagggaccccaac
ggaagagtgggggaaaaggactgaaggagctgaggggcttgcaaccccat
gggaagaacaacagtatcaactacctggacaccctgagcccccagggact
aaatcaccaaccaaagagtatacgtggatgggtccatggctccagctaca
tatgtagcagaaaggggattgccttatctggcatcaatgggagaggaggc
ctttttttcctgtggagggatgctacagcaatgggacaggagtggggtag
tggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59063316_59064440
seq2: B6Ng01-007O06.b_46_1159 (reverse)

seq1  TTACTTTGTTATGTAGCCTTCAGAGGTTTTTGCTTATATGTGGCTAGAAC  50
      |||||||| ||   |||||||||||| |||||| ||||||||||||| ||
seq2  TTACTTTGATAATAAGCCTTCAGAGG-TTTTGC-TATATGTGGCTAG-AC  47

seq1  ATACAGATCTTGCCATAAAATTCAGTACCATTCTAAATTCAGTTCTAAAC  100
      ||| ||||||||||| |||| ||||||||| |||||||||||||||||||
seq2  ATA-AGATCTTGCCAAAAAAGTCAGTACCA-TCTAAATTCAGTTCTAAAC  95

seq1  TTACTTTCCTGAAAAGAGCCCAACTTTGTTTCTCGCATTACCTTTGCTCT  150
       |||||| ||| ||||||||||||||||||||  || |||||||||||||
seq2  -TACTTT-CTG-AAAGAGCCCAACTTTGTTTCCTGCCTTACCTTTGCTCT  142

seq1  CATGATACAGAAAAGTAAAACTGCTTTCTTCAGTGTGTTCTTCATTAAAG  200
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  CATGATACAGAAAAGTAAAACTGC-TTCTTCAGT-TGTTCTTCATTAAAG  190

seq1  CTATTGAGACCTTTCACTCCCTCAAATCTTATCCAAGTGTCCTAGCTCTT  250
      |||||||||| ||  |||||||| ||||||||||||||||||||||||||
seq2  CTATTGAGACTTTCAACTCCCTC-AATCTTATCCAAGTGTCCTAGCTCTT  239

seq1  AGTAATTGTTTCTAGCATTGGACTGTT-AAAAATGCTTATTTTACATGTT  299
      |||||||| |||||||||| ||||||| ||||||||||||||||||||||
seq2  AGTAATTG-TTCTAGCATT-GACTGTTAAAAAATGCTTATTTTACATGTT  287

seq1  CATTTAAGCTTTCTTCAACCATCTTGTATCATTAATTTGTCTTATGGATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGCTTTCTTCAACCATCTTGTATCATTAATTTGTCTTATGGATA  337

seq1  TATTCTAGTTATTTATACACCTATGTCATCACCAC-AAATAACCTTAAAT  398
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  TATTCTAGTTATTTATACACCTATGTCATCACCACAAAAAAACCTTAAAT  387

seq1  TTTCTTTGGCTAAAATACTTGTCTTACACTACTCAGTGTCTTTTACTCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGGCTAAAATACTTGTCTTACACTACTCAGTGTCTTTTACTCAA  437

seq1  TACTGTACCTATGTAAAGCTCTAAGGTCATATGTATAGAGAGATATGTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTACCTATGTAAAGCTCTAAGGTCATATGTATAGAGAGATATGTAA  487

seq1  ATATGCATGTGTGTCTGTTTTATAAAGCAATCTCTAGGTATCCGATATTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATGTGTGTCTGTTTTATAAAGCAATCTCTAGGTATCCGATATTA  537

seq1  TATGTAAGTATGAAGCTTAAATGGATATTTTCTTAAAGGCCTCTAATTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTATGAAGCTTAAATGGATATTTTCTTAAAGGCCTCTAATTCT  587

seq1  TTGGGGTTGATTAGATGACTCCAGTGAGTCACGGTGCCTGAGCCCATCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTGATTAGATGACTCCAGTGAGTCACGGTGCCTGAGCCCATCAG  637

seq1  TAGCCTTCAGGCCTCCTTTAAGAGTAAATCCTGGCAAGAATATTTTTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCAGGCCTCCTTTAAGAGTAAATCCTGGCAAGAATATTTTTTGA  687

seq1  AGCAAATAGAAAGCAGCAGACTTTTAAGCTGGGTGGTGGTGCACACATCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATAGAAAGCAGCAGACTTTTAAGCTGGGTGGTGGTGCACACATCT  737

seq1  TTAATCTCAGCACTTTGAAGGCAGAGGCAGGCAAATTTCTGAGTTCAAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCAGCACTTTGAAGGCAGAGGCAGGCAAATTTCTGAGTTCAAGG  787

seq1  TCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACATGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACATGGA  837

seq1  GAGAAAGCCTGTCTTGAAAAACAAAAAACAATCAAACAGTAAACAAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGCCTGTCTTGAAAAACAAAAAACAATCAAACAGTAAACAAAAAA  887

seq1  AATTGATATTAGTATGAACATTATGAGTAAATATTGGGCATAATGCTGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATATTAGTATGAACATTATGAGTAAATATTGGGCATAATGCTGGT  937

seq1  TTTCTATACCAATTATATTTACCTTCACAGTAACTTTTCCTTAGAAATAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATACCAATTATATTTACCTTCACAGTAACTTTTCCTTAGAAATAC  987

seq1  TTCTAAGGACCACCTACTTTGACCAATCATTTAACTGCTAAGTGTATCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGACCACCTACTTTGACCAATCATTTAACTGCTAAGTGTATCTT  1037

seq1  TATGGCTTGGAGCCTTATCACAAGACCAAAACCATTGTGGTCTGTTTTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTGGAGCCTTATCACAAGACCAAAACCATTGTGGTCTGTTTTGA  1087

seq1  TTACCTAACATACATGTTTTAGAATTC  1125
      |||||||||||||||||||||||||||
seq2  TTACCTAACATACATGTTTTAGAATTC  1114

seq1: chr8_58907012_58907681
seq2: B6Ng01-007O06.g_69_738

seq1  GAATTCAACTTTTAATATAGTCATTACTTCAGATATTTATTTTTATCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTTAATATAGTCATTACTTCAGATATTTATTTTTATCAAA  50

seq1  AACTCTTCCTTTAGAAGCTTAGATACCCTTAATAATGTCCTTAAGCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTCCTTTAGAAGCTTAGATACCCTTAATAATGTCCTTAAGCAATT  100

seq1  TTAGTGGCCTATGAAACAAATTTAATATGCTCAAGTATGATAGTTTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGCCTATGAAACAAATTTAATATGCTCAAGTATGATAGTTTTAGT  150

seq1  AGATATTAAGAAGTATATATAGGGTAGGAAACAGGAGGAACCATTAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTAAGAAGTATATATAGGGTAGGAAACAGGAGGAACCATTAGAAA  200

seq1  GTCCCAGATGCCAGGAAAGGGAGAGTTTCCCAGGACCTAAAAGGAATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGATGCCAGGAAAGGGAGAGTTTCCCAGGACCTAAAAGGAATGAC  250

seq1  AGCTGAAATACCCAATAGAGGGAGATAGAAACTGAACAAACCACCTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATACCCAATAGAGGGAGATAGAAACTGAACAAACCACCTCCAG  300

seq1  TTGAGGGATGGGACAATCCACCCATCTCAATTTTTTTTTTAATCCAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGATGGGACAATCCACCCATCTCAATTTTTTTTTTAATCCAGAAT  350

seq1  TGTTCCTGTCCAAAGGAAACAGAGGGACAAAAACTGGAGCAGAGACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGTCCAAAGGAAACAGAGGGACAAAAACTGGAGCAGAGACTGAA  400

seq1  GGAAATGCCATCCAGAGACTAGCCCACCTTGGGATTCATCCCATCTGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCCATCCAGAGACTAGCCCACCTTGGGATTCATCCCATCTGCAG  450

seq1  ATACCAAACCCAGATACAATTGCTGATGCCATGAAGTGCTTGCAGACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAACCCAGATACAATTGCTGATGCCATGAAGTGCTTGCAGACAGA  500

seq1  AGCCTGGTATGGATGTTCCCTGAGAGGTTCTGCCAGCACCTCACCTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTATGGATGTTCCCTGAGAGGTTCTGCCAGCACCTCACCTACAC  550

seq1  AGATGCAGATACTCACAGTCAACCATCAGACTGAGTCCAGGGACCCCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGATACTCACAGTCAACCATCAGACTGAGTCCAGGGACCCCAAC  600

seq1  GGAAGAGTGGGGGAAAAGGACTGAAGGAGCTGAGGGGCTTGCAACCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTGGGGGAAAAGGACTGAAGGAGCTGAGGGGCTTGCAACCCCAT  650

seq1  GGGAAGAACAACAGTATCAA  670
      ||||||||||||||||||||
seq2  GGGAAGAACAACAGTATCAA  670