BAC Information

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BAC

Clone NameB6Ng01-007P14
Chromosome8 (Build37)
Map Location 25,197,730 - 25,279,565
singlet/doubletdoublet
Overlap genenone
Upstream geneAnk1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007P14.bB6Ng01-007P14.g
ACCDH844390DH844391
length1,1551,019
definitionDH844390|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P14, 5' end.DH844391|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,278,420 - 25,279,565)(25,197,730 - 25,198,747)
sequence
gaattcactgaatcatgttattttttttatcataattcctttctgtaatg
ggggtgaaggccaaggaaaaactaatctcttataagtcatttcaccataa
ccagagagaaacctaggaaaagctagtctctttgatttgtcctgtcttct
gcccgagtcccaggtataacagaagggtgagtgacttggaatcccctaag
tataaattatctagaatcctccacaggcatgtaggtaggtctgtccactg
cctgaggcctgggcctttcctggagatgtgcagaaggaagtggaaccacc
tgctcactgtctaggaacgtgatttcagatgaaggtgcagacacagggaa
accccctcacttcaaccttcccagccaacacaaagagaatggcgggctgt
ggcatgaagttgaatcctgatgggcataagggggcactttctgagacttc
tagaaaggtgtcaggagactgtatatggatggatccaacccacagggtaa
gtttgctgcccctcaccccagactcccacttggctaccaggccagccctg
gacaggaaatcaggtataggggccataggtgaaaacctgaaattgtgagg
gttcttcttgattcttcatttcagcagattgagagacacctggaagatag
gtcaggcccacttctactgtgtctgtgggtgtttctagagagggtcaaat
aagggaagagagcccagcctgaatgtgattggtactgtccctagcctgga
aactcagatggaatgagaagaaggagactgcccggggcttcagcatcctc
tgtctgcctcccttccaccatttgggattgaaatatccatagcttaaagt
caaaacaatctctctttcactttcagttttttatgttctgccagctaaga
tttgcttaacacggcaatagaacactatttgggccaacacgttcttttct
attctcccccacgctcttcgtgttcccaccagcagtcagaggggcagagt
cttttagttacagccacctctgttccatgttgcttgcagtgattatgaat
ggccacgaggctgccctgttctgctgctgtgagcctgcttcagttcactt
ttctctccactttgtcatcgtctttaatgagggataccagcctggtggaa
tggaa
gaattcaacacagtggggcaaagagcatcctcagccaacatgacttatct
tttatctatatttatacaagttcactgggttcttagtgggctgcaaatga
acacttcagggcaaattctgagtaagtcacaggagacccaaagagattta
catgcctggacaggaggcctaatggaacagctgtcacttgatctgggtgg
ctggcagttagagctgtcaagctattcttcatggtactggtatgaaagtc
agtgtattttacagttcttgctaacaccctggcttggcagggaatctggc
tacctctggcccctaccacagtatcatcttttcactggtaacgggatata
gtcctgagtaatgattcttccagtctactaggaatgtaagatgagcaaat
ggaaatgtctttggatggtggtaaagagagccgaatcacagatttgagga
actgagaaagaatcttgagtagggagagagagagtgcagaaggagtcccc
agagcctcccagttgtggcataagcaggtgtctggaaagaatggaaaaat
cgctaaaagcacctccagtttgctttttatcacccatgcgctggtaattc
taaatgtcagtgatgaaattttctcgagctggggagactacccgtccctt
ggccctccatctgcagttgcttgaaagtgggttaatgtaacactctcgct
ggttgatgaaggaagtgagccccagtatctggctgactccctaaagctag
agtagctgctaaaatctagctttcctttctgtatcccagaggcctttcca
gcccatttacctgcctgactcaggggttggaaacactggtgggcccagca
actgcacaaatttgatcatgctaagcaaattaagaaatcttaaaaatgct
ggaaaagagcccagttggctgccctcggtgcccatttgcttacatctcat
actggaaagattttcagccttaaagctgtttgtttctgtctgatccttca
tttgtagtagtgagccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25278420_25279565
seq2: B6Ng01-007P14.b_51_1205 (reverse)

seq1  TTCCATTCCACAGACGCTGGTAT-CCTCATTAAAGACGATGACAATAGTT  49
      |||||||||||  | |||||||| ||||||||||||||||||||| || |
seq2  TTCCATTCCAC-CAGGCTGGTATCCCTCATTAAAGACGATGACAA-AG-T  47

seq1  GTAGAGAAAGTGGAACTGGAGCA-GCTCACAGCAGCAGAACAGGGGCAGC  98
      | |||||||   |||||| |||| |||||||||||||||||| |||||||
seq2  GGAGAGAAAAGTGAACTGAAGCAGGCTCACAGCAGCAGAACA-GGGCAGC  96

seq1  CTCGGTGGCCATTCATTAATCACTGC-AGCAACATGG-ACAGAGGTGGCT  146
      ||| ||||||||||| |||||||||| |||||||||| ||||||||||||
seq2  CTC-GTGGCCATTCA-TAATCACTGCAAGCAACATGGAACAGAGGTGGCT  144

seq1  GTAACT-AAAGACTCTG-CCCTCTGGCTGCTGGTGGG-ACACGGAGAGCG  193
      |||||| |||||||||| ||||||| ||||||||||| ||||| ||||||
seq2  GTAACTAAAAGACTCTGCCCCTCTGACTGCTGGTGGGAACACGAAGAGCG  194

seq1  T-GGGGAG-ATAGGAAAGAACGTGTTGGCC--AATAGTGTTCTATTGCCG  239
      | |||||| |||| ||||||||||||||||  ||||||||||||||||||
seq2  TGGGGGAGAATAGAAAAGAACGTGTTGGCCCAAATAGTGTTCTATTGCCG  244

seq1  TGTTAAGCAAATCTTAGCTGGCAG-ACAT-AGAAACTGGAAGTTGAAAGA  287
      |||||||||||||||||||||||| |||| | |||||| ||| |||||||
seq2  TGTTAAGCAAATCTTAGCTGGCAGAACATAAAAAACTGAAAG-TGAAAGA  293

seq1  GAGATTGTTTTGACTTT-AGCTATGGATATTTCAAT-CCAAATGGTGGAA  335
      ||||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  GAGATTGTTTTGACTTTAAGCTATGGATATTTCAATCCCAAATGGTGGAA  343

seq1  -GGAGGCAGACAGAGGATGCTGAAGCCCCGGGCAGTCTCCTTCTTCTCAT  384
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGACAGAGGATGCTGAAGCCCCGGGCAGTCTCCTTCTTCTCAT  393

seq1  TCCATCTGAGTTTCCAGGCTAGGGACAGTACCAATCACATTCAGGCTGGG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGAGTTTCCAGGCTAGGGACAGTACCAATCACATTCAGGCTGGG  443

seq1  CTCTCTTCCCTTATTTGACCCTCTCTAGAAACACCCACAGACACAGTAGA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCCTTATTTGACCCTCTCTAGAAACACCCACAGACACAGTAGA  493

seq1  AGTGGGCCTGACCTATCTTCCAGGTGTCTCTCAATCTGCTGAAATGAAGA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCCTGACCTATCTTCCAGGTGTCTCTCAATCTGCTGAAATGAAGA  543

seq1  ATCAAGAAGAACCCTCACAATTTCAGGTTTTCACCTATGGCCCCTATACC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAGAACCCTCACAATTTCAGGTTTTCACCTATGGCCCCTATACC  593

seq1  TGATTTCCTGTCCAGGGCTGGCCTGGTAGCCAAGTGGGAGTCTGGGGTGA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTGTCCAGGGCTGGCCTGGTAGCCAAGTGGGAGTCTGGGGTGA  643

seq1  GGGGCAGCAAACTTACCCTGTGGGTTGGATCCATCCATATACAGTCTCCT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGCAAACTTACCCTGTGGGTTGGATCCATCCATATACAGTCTCCT  693

seq1  GACACCTTTCTAGAAGTCTCAGAAAGTGCCCCCTTATGCCCATCAGGATT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTTCTAGAAGTCTCAGAAAGTGCCCCCTTATGCCCATCAGGATT  743

seq1  CAACTTCATGCCACAGCCCGCCATTCTCTTTGTGTTGGCTGGGAAGGTTG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATGCCACAGCCCGCCATTCTCTTTGTGTTGGCTGGGAAGGTTG  793

seq1  AAGTGAGGGGGTTTCCCTGTGTCTGCACCTTCATCTGAAATCACGTTCCT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGGGGTTTCCCTGTGTCTGCACCTTCATCTGAAATCACGTTCCT  843

seq1  AGACAGTGAGCAGGTGGTTCCACTTCCTTCTGCACATCTCCAGGAAAGGC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGAGCAGGTGGTTCCACTTCCTTCTGCACATCTCCAGGAAAGGC  893

seq1  CCAGGCCTCAGGCAGTGGACAGACCTACCTACATGCCTGTGGAGGATTCT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTCAGGCAGTGGACAGACCTACCTACATGCCTGTGGAGGATTCT  943

seq1  AGATAATTTATACTTAGGGGATTCCAAGTCACTCACCCTTCTGTTATACC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTATACTTAGGGGATTCCAAGTCACTCACCCTTCTGTTATACC  993

seq1  TGGGACTCGGGCAGAAGACAGGACAAATCAAAGAGACTAGCTTTTCCTAG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTCGGGCAGAAGACAGGACAAATCAAAGAGACTAGCTTTTCCTAG  1043

seq1  GTTTCTCTCTGGTTATGGTGAAATGACTTATAAGAGATTAGTTTTTCCTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCTGGTTATGGTGAAATGACTTATAAGAGATTAGTTTTTCCTT  1093

seq1  GGCCTTCACCCCCATTACAGAAAGGAATTATGATAAAAAAAATAACATGA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCACCCCCATTACAGAAAGGAATTATGATAAAAAAAATAACATGA  1143

seq1  TTCAGTGAATTC  1146
      ||||||||||||
seq2  TTCAGTGAATTC  1155

seq1: chr8_25197730_25198747
seq2: B6Ng01-007P14.g_69_1087

seq1  GAATTCAACACAGTGGGGCAAAGAGCATCCTCAGCCAACATGACTTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACAGTGGGGCAAAGAGCATCCTCAGCCAACATGACTTATCT  50

seq1  TTTATCTATATTTATACAAGTTCACTGGGTTCTTAGTGGGCTGCAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATATTTATACAAGTTCACTGGGTTCTTAGTGGGCTGCAAATGA  100

seq1  ACACTTCAGGGCAAATTCTGAGTAAGTCACAGGAGACCCAAAGAGATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCAGGGCAAATTCTGAGTAAGTCACAGGAGACCCAAAGAGATTTA  150

seq1  CATGCCTGGACAGGAGGCCTAATGGAACAGCTGTCACTTGATCTGGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGACAGGAGGCCTAATGGAACAGCTGTCACTTGATCTGGGTGG  200

seq1  CTGGCAGTTAGAGCTGTCAAGCTATTCTTCATGGTACTGGTATGAAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGTTAGAGCTGTCAAGCTATTCTTCATGGTACTGGTATGAAAGTC  250

seq1  AGTGTATTTTACAGTTCTTGCTAACACCCTGGCTTGGCAGGGAATCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTTACAGTTCTTGCTAACACCCTGGCTTGGCAGGGAATCTGGC  300

seq1  TACCTCTGGCCCCTACCACAGTATCATCTTTTCACTGGTAACGGGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGGCCCCTACCACAGTATCATCTTTTCACTGGTAACGGGATATA  350

seq1  GTCCTGAGTAATGATTCTTCCAGTCTACTAGGAATGTAAGATGAGCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGTAATGATTCTTCCAGTCTACTAGGAATGTAAGATGAGCAAAT  400

seq1  GGAAATGTCTTTGGATGGTGGTAAAGAGAGCCGAATCACAGATTTGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTCTTTGGATGGTGGTAAAGAGAGCCGAATCACAGATTTGAGGA  450

seq1  ACTGAGAAAGAATCTTGAGTAGGGAGAGAGAGAGTGCAGAAGGAGTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAAAGAATCTTGAGTAGGGAGAGAGAGAGTGCAGAAGGAGTCCCC  500

seq1  AGAGCCTCCCAGTTGTGGCATAAGCAGGTGTCTGGAAAGAATGGAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTCCCAGTTGTGGCATAAGCAGGTGTCTGGAAAGAATGGAAAAAT  550

seq1  CGCTAAAAGCACCTCCAGTTTGCTTTTTATCACCCATGCGCTGGTAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAAAAGCACCTCCAGTTTGCTTTTTATCACCCATGCGCTGGTAATTC  600

seq1  TAAATGTCAGTGATGAAATTTTCTCGAGCTGGGGAGACTACCCGTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTCAGTGATGAAATTTTCTCGAGCTGGGGAGACTACCCGTCCCTT  650

seq1  GGCCCTCCATCTGCAGTTGCTTGAAAGTGGGTTAATGTAACACTCTCGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCCATCTGCAGTTGCTTGAAAGTGGGTTAATGTAACACTCTCGCT  700

seq1  GGTTGATGAAGGAAGTGAGCCCCAGTATCTGGCTGACTCCCTAAAGCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATGAAGGAAGTGAGCCCCAGTATCTGGCTGACTCCCTAAAGCTAG  750

seq1  AGTAGCTGCTAAAATCTAGCTTTCCTTTCTGTATCCCAGAGGCCTTTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGCTAAAATCTAGCTTTCCTTTCTGTATCCCAGAGGCCTTTCCA  800

seq1  GCCCA-TTACCTGCCTGACTCAGGGGTTGGAAACACTGGTGGGCCCAGCA  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTTACCTGCCTGACTCAGGGGTTGGAAACACTGGTGGGCCCAGCA  850

seq1  ACTGCACAAAATTTGATCATGCTAAGCAAATTAAGAAATC-TAAAAATGC  898
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ACTGCAC-AAATTTGATCATGCTAAGCAAATTAAGAAATCTTAAAAATGC  899

seq1  TGGAAAAGAGCCCAGTTGGCTGCCCTCGGTGCCCATTTGCTTACAACTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGAAAAGAGCCCAGTTGGCTGCCCTCGGTGCCCATTTGCTTACATCTCA  949

seq1  TACTGG-AGGATTTTCAGCCTTAGAGCTGTTTGTTTCTGTCTGATCCTTC  997
      |||||| | |||||||||||||| ||||||||||||||||||||||||||
seq2  TACTGGAAAGATTTTCAGCCTTAAAGCTGTTTGTTTCTGTCTGATCCTTC  999

seq1  ATTTGTAGTAAGTGAGCCTTT  1018
      ||||||||| |||||||||||
seq2  ATTTGTAGT-AGTGAGCCTTT  1019