BAC Information

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BAC

Clone NameB6Ng01-008O05
Chromosome8 (Build37)
Map Location 17,667,890 - 17,791,596
singlet/doubletdoublet
Overlap genenone
Upstream geneCsmd1
Downstream geneLOC665638, LOC100040466, Mcph1, Angpt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008O05.bB6Ng01-008O05.g
ACCDH844991DH844992
length1,003157
definitionDH844991|Mus musculus domesticus DNA, BAC clone: B6Ng01-008O05, 5' end.DH844992|Mus musculus domesticus DNA, BAC clone: B6Ng01-008O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,667,890 - 17,668,893)(17,791,440 - 17,791,596)
sequence
gaattcagctataagattaattggtaacccaagatctatgagatcaatga
gggaattttcagatgggctgggtgtgggagaccaaggatggtctgtcttt
gagaaatatacagatgactgtatggacatctccaaacaagaagcagatgt
cacacgagggtgagaagcaactgtagttatttgtcaggcttttaggcagc
tcagtgtttccctgtaatagctctgacttttatttcctaaatggctaaag
acttattaagacagaagttgaaaatattcaaatgcataaaaggtagattg
aatcgatatttatgaagcaaaatacaaatgtgtgccagaaggtaatagta
atctaaatgagggagattttttattggatattttatttatttacatttta
aatgttatcccctttcctggtttcccttctgtaaaccccctatctcatct
tccttctccctgcttttatgagagtgctcccctaccctcccagccactcc
cacctcaccaccctcgcattcccctgcactgagccatcgagactgagggg
gatttttatgagagagtctgtggcataaggacagtatccatgcatccttc
tgatttgtatgcatgatacaaagacataatcatgaaatagatttaaggct
cacaggctcccataggtctgtatctcagagatgtgcctcaatcccctgag
gtggaacgctagaatccttcacatccctgactctcacagggaagaaatgc
ctggtcttccttgttcaaagtcatatctcaggatgactgagtttggaggg
agagtgacaagacaacaacttactatattcaacatgatgcaaaaacacca
tggattaaacattttattatcataatttcagaggggtaaggatttcaagg
cagattatgggaagatttagtgcctttgaggctgagacctttgggttttc
agactttttggatattgttgggcattagtggagaaatgaatgaaaaagct
ctc
agaagttcaagatcagccacagccgtatagcaagttatataccagttttg
gatacacaagactttctcaactttttttaaaaaagaaaagagaataaaag
aaaatgggaaaggagaaatacataaatgagagagagggggggaaggaggg
agggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17667890_17668893
seq2: B6Ng01-008O05.b_48_1050

seq1  GAATTCAGCTATAAGATTAATTGGTAACCCAAGATCTATGAGATCAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTATAAGATTAATTGGTAACCCAAGATCTATGAGATCAATGA  50

seq1  GGGAATTTTCAGATGGGCTGGGTGTGGGAGACCAAGGATGGTCTGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTTCAGATGGGCTGGGTGTGGGAGACCAAGGATGGTCTGTCTTT  100

seq1  GAGAAATATACAGATGACTGTATGGACATCTCCAAACAAGAAGCAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATATACAGATGACTGTATGGACATCTCCAAACAAGAAGCAGATGT  150

seq1  CACACGAGGGTGAGAAGCAACTGTAGTTATTTGTCAGGCTTTTAGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGAGGGTGAGAAGCAACTGTAGTTATTTGTCAGGCTTTTAGGCAGC  200

seq1  TCAGTGTTTCCCTGTAATAGCTCTGACTTTTATTTCCTAAATGGCTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTTCCCTGTAATAGCTCTGACTTTTATTTCCTAAATGGCTAAAG  250

seq1  ACTTATTAAGACAGAAGTTGAAAATATTCAAATGCATAAAAGGTAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTAAGACAGAAGTTGAAAATATTCAAATGCATAAAAGGTAGATTG  300

seq1  AATCGATATTTATGAAGCAAAATACAAATGTGTGCCAGAAGGTAATAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGATATTTATGAAGCAAAATACAAATGTGTGCCAGAAGGTAATAGTA  350

seq1  ATCTAAATGAGGGAGATTTTTTATTGGATATTTTATTTATTTACATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATGAGGGAGATTTTTTATTGGATATTTTATTTATTTACATTTTA  400

seq1  AATGTTATCCCCTTTCCTGGTTTCCCTTCTGTAAACCCCCTATCTCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCCCCTTTCCTGGTTTCCCTTCTGTAAACCCCCTATCTCATCT  450

seq1  TCCTTCTCCCTGCTTTTATGAGAGTGCTCCCCTACCCTCCCAGCCACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCCCTGCTTTTATGAGAGTGCTCCCCTACCCTCCCAGCCACTCC  500

seq1  CACCTCACCACCCTCGCATTCCCCTGCACTGAGCCATCGAGACTGAGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCACCACCCTCGCATTCCCCTGCACTGAGCCATCGAGACTGAGGGG  550

seq1  GATTTTTATGAGAGAGTCTGTGGCATAAGGACAGTATCCATGCATCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTATGAGAGAGTCTGTGGCATAAGGACAGTATCCATGCATCCTTC  600

seq1  TGATTTGTATGCATGATACAAAGACATAATCATGAAATAGATTTAAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTATGCATGATACAAAGACATAATCATGAAATAGATTTAAGGCT  650

seq1  CACAGGCTCCCATAGGTCTGTATCTCAGAGATGTGCCTCAATCCCCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTCCCATAGGTCTGTATCTCAGAGATGTGCCTCAATCCCCTGAG  700

seq1  GTGGAACGCTAGAATCCTTCACATCCCTGACTCTCACAGGGAAGAAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACGCTAGAATCCTTCACATCCCTGACTCTCACAGGGAAGAAATGC  750

seq1  CTGGTCTTCCTTGTTCAAAGTCATATCTCAGGATGACTGAGTTTGGAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTCCTTGTTCAAAGTCATATCTCAGGATGACTGAGTTTGGAGGG  800

seq1  AGAGTGACAAGACAACAACTTACTATATTCAACATGATGCAAAAACACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGACAAGACAACAACTTACTATATTCAACATGATGCAAAAACACCA  850

seq1  TGGATTAAACATTTAATTATCATAATTTCAGA-GGGTAAGGATTTCAAGG  899
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  TGGATTAAACATTTTATTATCATAATTTCAGAGGGGTAAGGATTTCAAGG  900

seq1  CAGATTATTGGAAGATTTAGTGCCTTTTGAGGCTGAGACCTTT-GGTTTT  948
      |||||||| ||||||||||||||| |||||||||||||||||| ||||||
seq2  CAGATTATGGGAAGATTTAGTGCC-TTTGAGGCTGAGACCTTTGGGTTTT  949

seq1  CAGACTTTTTTGATATTGTTGTGCCATTAAGTGGAGAAATGAATGAGAAA  998
      |||||||||| |||||||||| | |||| ||||||||||||||||| |||
seq2  CAGACTTTTTGGATATTGTTG-GGCATT-AGTGGAGAAATGAATGAAAAA  997

seq1  GCTCTC  1004
      ||||||
seq2  GCTCTC  1003

seq1: chr8_17791440_17791596
seq2: B6Ng01-008O05.g_75_231 (reverse)

seq1  TCTCCCTCCCTCCTTCCCCCCCTCTCTCTCATTTATGTATTTCTCCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCCCTCCTTCCCCCCCTCTCTCTCATTTATGTATTTCTCCTTTC  50

seq1  CCATTTTCTTTTATTCTCTTTTCTTTTTTAAAAAAAGTTGAGAAAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTTTTATTCTCTTTTCTTTTTTAAAAAAAGTTGAGAAAGTCTT  100

seq1  GTGTATCCAAAACTGGTATATAACTTGCTATACGGCTGTGGCTGATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCCAAAACTGGTATATAACTTGCTATACGGCTGTGGCTGATCTTG  150

seq1  AACTTCT  157
      |||||||
seq2  AACTTCT  157