MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-009I02
Chromosome	8 (Build37)
Map Location	60,427,195 - 60,427,884
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene	4930431L04Rik, BC030500
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC654355 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654355
definition	note : glutamate receptor, ionotropic, NMDA2A (epsilon 1) pseudogene pseudo : _no_value

name	LOC100040515 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Hand2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15111 MGI:103580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scrg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20284 MGI:1328308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sap30 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60406 MGI:1929129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97165 MGI:96157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547012 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547012
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Galnt7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108150 MGI:1349449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040634 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3927 ESTs, 23 Proteins

name	LOC100040711 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs

name	4930431L04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270049 MGI:1921140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC030500 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234290 MGI:2447770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040515 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258767 GeneID:100040515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100040515 transcript_id : XM_001474844.1

name	Hand2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802037 GeneID:15111 MGI:103580
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heart and neural crest derivatives expressed transcript 2 transcript_id : NM_010402.3

name	Scrg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226218 GeneID:20284 MGI:1328308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scrapie responsive gene 1 transcript_id : NM_009136.3

name	Sap30 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12408289 GeneID:60406 MGI:1929129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sin3 associated polypeptide transcript_id : NM_021788.1

name	Hmgb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982287 GeneID:97165 MGI:96157
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group box 2 transcript_id : NM_008252.2

name	Galnt7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802107 GeneID:108150 MGI:1349449
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 transcript_id : NM_144731.3

name	LOC100040634 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258769 GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 132 mRNAs, 3926 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001474733.1

name	LOC100040634 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258771 GeneID:100040634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 mRNAs, 1682 ESTs, 2 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001474752.1

name	LOC100040711 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258774 GeneID:100040711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs product : hypothetical protein LOC100040711 transcript_id : XM_001474867.1

name	4930431L04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239408 GeneID:270049 MGI:1921140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930431L04 gene transcript_id : NM_175032.1

name	BC030500 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734151 GeneID:234290 MGI:2447770
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC030500 transcript_id : NM_173411.1

name	LOC100040515 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258768 GeneID:100040515
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474894.1

name	Hand2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30231224 CCDS:CCDS22315.1 GeneID:15111 MGI:103580
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0007512 - adult heart development [Evidence IMP]; GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007507 - heart development [Evidence IGI]; GO:0001947 - heart looping [Evidence IMP]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : bHLH transcription factor product : heart and neural crest derivatives expressed transcript 2 protein_id : NP_034532.2

name	Scrg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677877 GeneID:20284 MGI:1328308
definition	codon_start : 1 note : scrapie responsive protein one product : scrapie responsive gene 1 protein_id : NP_033162.1

name	Sap30 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12408290 CCDS:CCDS22316.1 GeneID:60406 MGI:1929129
definition	GO_component : GO:0016580 - Sin3 complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : sin3 associated polypeptide, 30kD; Sin3-associated protein product : sin3 associated polypeptide protein_id : NP_068560.1

name	Hmgb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680229 GeneID:97165 MGI:96157
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0000793 - condensed chromosome [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0008301 - DNA bending activity [Evidence ISS]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence ISS]; GO:0003697 - single-stranded DNA binding [Evidence ISS] GO_process : GO:0006288 - base-excision repair, DNA ligation [Evidence ISS]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0006281 - DNA repair [Evidence ISS]; GO:0006260 - DNA replication [Evidence ISS]; GO:0006268 - DNA unwinding during replication [Evidence ISS]; GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence ISS]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : high mobility group protein 2 product : high mobility group box 2 protein_id : NP_032278.1

name	Galnt7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542882 CCDS:CCDS22317.1 GeneID:108150 MGI:1349449
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IDA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ppGaNTase-T7 product : UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein_id : NP_653332.2

name	LOC100040634 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258770 GeneID:100040634
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001474783.1

name	LOC100040634 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258772 GeneID:100040634
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001474802.1

name	LOC100040711 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258775 GeneID:100040711
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474917.1

name	4930431L04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239409 CCDS:CCDS22318.1 GeneID:270049 MGI:1921140
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC270049 protein_id : NP_778197.1

name	BC030500 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734152 GeneID:234290 MGI:2447770
definition	codon_start : 1 product : hypothetical protein LOC234290 protein_id : NP_775587.1

name	LOC547012 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547012
definition	number : 1 pseudo : _no_value

clone name	MSMg01-279D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321M02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-397D12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-405P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-009I02.b	B6Ng01-009I02.g
ACC	DH845427	DH845428
length	878	692
definition	DH845427\|Mus musculus domesticus DNA, BAC clone: B6Ng01-009I02, 5' end.	DH845428\|Mus musculus domesticus DNA, BAC clone: B6Ng01-009I02, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgctgtactggggcatataaagtttgcaataccaaggggcctct cttcccagtgatggctgactaggccatcttctgctgcttgtgcagctagt gctcagggggtactggttagttcatattgttgttccacctgtagggttgc agaccccttcagctctttgggtgctttctctagcttcgtcgttgggggcc ctgtgttctgtcttatagataactgtgagcatctacttctgtatttgcca ggcaggggcatagcctcatacgagacagctataccagggtcccttcatca aaaacttgctggcatatgcaatagtgtctgggtttggtggctgattatag gatggattcctgggcggggtagtctctggatagtccatcctttcgtctta gctccaaactttatctctgtaactcctttcatgggtattttgttccctat tttaaggaggaccgaagtatccacccattggtcttccctcttctcaattt tcttgtgttttgcaaattgtatcttgggtgttctatgtttctgatctaat atccacttatcagtgagtgcatatctaatggcttcttttgtgatgggtta cctcactaaggatgatatccttccagatacaaccatttgtccaagaattt cataaattcattgtttttaatagctgagtagtactctattgtgcacatgt actgcattttctgtatccattccctctgttgagggacatctggggctctt tccagcttctggttattataaataagtgttgatatgaacatagtggggca tgtacagagctaaacaaaagaattctcaacttgaggaagatcgaatggtt gagaaacatctgaaaaaaatgtttcacc	gaattccgaggtccaaggaggtgggaccaaagggagagttagttaaagtc agaataaaaaccatggtaatgcttgtgtagggatggggaaggttttctgg aggatccttggcactagggtcctgaatgcctgatacatggaagtgaaaga aatctcttaatttcttactttcttctaagacattatgacatgtacacatt cagacccttaacagagtgatagcagaaaaacattaacaaaaaacaaaaaa acccgagaacccacagttagagatcaaagcaaggagatcttaaagctgat atcatcctaggaactcaggcatactgataggtcaggacaaactgaagagg gtcgtatgagcacctgtgctccagaaaataactgcatcaaatgcttactt agggattgattttgccaatattatattggtactattggaaggggtgaatt agagaaagcatccaatggaggagggaatcacaacatgtcttgggagaggg agttgtgcaaacatcatttttagaaagcagagaagaggaatttttgccat tctcttatgaatatcaatgaccagatgtgatttctcatggagaattgaga ccagggcagccaacatccctccaaaagctgatggggtaggaggggatctc tcaagagggctgggtgattaactactaattttttgattggct
quality values	Open. Hide. 57 34 20 21 61 53 37 27 47 53 47 50 50 53 47 61 61 61 47 55 55 61 25 27 16 12 9 12 14 17 12 11 18 15 23 49 52 52 59 43 59 61 61 61 61 61 61 59 61 61 61 59 59 59 52 59 49 59 61 59 59 59 61 61 59 59 45 49 38 35 26 21 28 26 36 43 49 55 59 59 59 59 61 59 59 59 59 59 61 61 61 61 61 59 59 61 59 61 49 52 59 59 59 59 61 59 61 61 61 59 59 59 59 59 61 61 61 61 61 59 59 59 59 59 59 59 61 61 61 59 61 59 45 39 43 44 39 44 49 49 52 61 61 59 61 61 59 59 59 59 59 41 61 59 44 59 59 59 59 59 52 45 59 59 59 59 59 61 59 61 59 49 61 59 59 59 59 59 52 59 59 49 49 59 59 49 59 36 39 59 52 59 61 61 61 59 55 55 49 59 59 52 59 61 61 59 59 59 45 52 39 49 45 45 61 61 61 59 61 59 59 59 59 59 61 59 59 59 52 59 59 59 59 52 52 59 59 59 52 59 59 61 61 61 52 52 50 43 44 52 43 59 52 59 59 61 59 59 59 59 59 52 34 49 52 49 52 39 59 59 59 45 61 44 59 59 59 52 61 59 52 59 49 52 52 52 43 61 59 52 59 59 59 59 59 52 36 49 44 41 43 49 59 59 59 52 52 52 49 52 52 61 59 59 61 59 59 59 59 59 59 59 55 59 59 61 59 59 59 61 55 59 61 61 61 61 61 59 59 55 59 61 59 61 59 59 59 59 61 55 55 59 61 61 61 49 45 41 44 41 43 59 59 59 52 52 59 61 61 61 61 59 36 33 37 33 39 45 61 59 59 49 38 38 52 49 49 41 49 52 52 52 52 45 23 36 41 43 39 59 19 36 39 37 36 23 43 59 59 59 59 59 61 61 61 61 61 61 61 43 43 49 36 45 41 45 39 36 59 59 59 59 61 59 59 59 59 59 59 59 59 61 49 45 41 35 35 45 43 59 59 59 59 59 59 24 38 37 15 21 35 22 59 41 59 61 52 61 49 52 59 52 43 52 52 52 49 59 59 59 49 59 59 43 43 43 36 18 18 22 13 23 21 40 59 52 59 52 49 37 36 49 41 49 61 55 61 61 61 49 43 49 41 37 43 52 55 52 52 52 41 52 52 52 52 61 61 61 61 43 32 25 31 28 28 49 49 49 49 55 55 52 52 55 55 52 52 52 52 28 28 31 28 25 18 34 37 37 55 55 52 37 37 55 61 61 49 55 55 49 49 49 49 50 33 33 49 61 47 55 47 32 43 34 33 23 34 55 55 55 55 55 61 55 55 55 47 50 50 50 41 43 36 37 37 34 50 55 55 38 61 29 30 50 61 55 50 50 21 18 11 13 12 14 14 10 36 14 19 21 9 8 8 13 18 35 55 61 43 43 31 31 29 38 24 61 29 43 53 52 50 50 43 50 53 35 35 26 29 23 35 61 31 9 53 61 61 31 31 20 15 26 15 47 50 47 47 16 10 36 10 18 23 35 35 38 35 52 50 37 33 22 32 33 23 32 33 53 50 39 32 43 37 47 43 35 37 36 35 29 28 13 32 27 13 33 17 37 31 27 27 9 24 13 30 18 35 43 12 42 24 47 16 47 31 31 20 33 31 23 14 13 20 17 27 24 30 27 30 13 33 24 16 13 9 27 61 27 39 39 31 53 31 20 28 40 45 52 21 13 38 47 30 38 38 10 9 24 8 24 12 33 14 13 42 28 43 32 34 36 28 24 7 21 38 53 35 26 30 23 34 38 28 17 27 23 19 30 16 10 16 17 28 26 27 23 30 10 29 18 32 17 14 32 24 27 17 11 14 8 14 22 28 30 12 30 33 23 8 12 8 6 6 8 23 7 7 7 5 5 6 23 27 28 34 8 7 5 7 8 7 12 16 38 23 43 8 15 8 12 10 6 13 10 8 16 6 5	Open. Hide. 61 61 55 37 16 21 28 8 18 13 16 18 18 15 34 41 59 61 59 59 61 59 61 59 59 59 59 59 49 59 61 61 55 44 59 61 61 61 61 61 61 61 61 61 61 61 59 36 39 41 23 21 30 28 35 36 44 59 52 59 59 59 49 61 61 59 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 59 59 52 52 49 52 61 59 59 59 59 59 59 61 59 52 36 43 30 52 52 61 49 52 59 49 49 52 59 59 49 49 52 39 52 61 61 61 61 59 61 59 61 61 59 61 61 59 59 45 43 43 44 37 39 59 61 49 49 45 39 43 45 49 49 52 49 52 44 45 45 52 41 43 59 35 59 59 52 59 61 61 59 52 59 52 43 59 59 52 43 52 43 45 39 52 59 55 36 39 61 59 52 59 59 52 52 52 52 45 39 59 61 61 61 61 59 52 39 52 49 39 61 61 59 59 59 59 52 59 59 52 52 52 49 52 59 52 59 59 52 49 59 61 61 52 52 49 52 52 52 37 59 45 59 52 59 52 52 43 52 45 45 61 59 59 59 55 44 59 59 59 52 52 59 52 59 52 59 59 61 61 36 59 59 52 52 49 61 49 43 49 52 59 59 61 52 45 59 49 43 52 45 44 44 59 43 43 59 52 59 52 52 39 27 61 52 45 59 49 59 50 59 61 61 61 44 59 44 52 49 45 61 59 59 59 59 59 59 59 59 59 61 59 61 59 59 59 44 59 49 52 59 59 59 59 41 52 45 52 49 52 59 59 59 59 59 59 59 49 39 61 61 61 61 61 59 61 59 59 59 39 27 45 37 30 36 59 61 61 59 49 52 49 49 49 49 61 61 61 59 59 44 59 61 59 59 61 59 59 59 59 59 45 52 61 61 61 61 61 61 61 61 61 61 59 52 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 52 43 39 14 49 33 59 49 41 41 39 24 40 49 43 43 39 30 47 55 61 52 61 61 61 61 61 52 41 41 37 36 37 32 37 49 41 52 52 43 37 61 61 61 61 61 61 55 61 50 61 55 61 55 55 61 49 35 43 27 9 10 10 14 10 26 49 50 61 61 61 61 26 25 14 16 13 18 36 29 43 24 31 11 15 7 9 43 61 55 55 32 47 53 50 43 50 37 43 43 43 36 32 43 53 47 53 37 24 61 53 53 47 43 47 53 50 36 37 61 32 32 22 22 22 14 52 42 50 53 52 24 20 50 14 13 43 50 39 61 61 34 26 27 14 17 14 13 12 21 17 34 27 26 13 13 27 42 14 14 8 9 16 14 33 22 24 27 31 20 20 8 45 47 26 23 35 47 36 53 53 41 47 12 30 34 34 28 45 47 12 17 27 11 20 15 47 31 32 45 53 42 35 37 37 39 32 47 28 42 53 24 53 37 53 43 38 52 31 21 43 28 30 27 43 38 33 14 30 32 38 45 37 45 28 25 22 42 45 38 50 14 9 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_60427195_60427884
seq2: B6Ng01-009I02.g_69_760

seq1  GAATTCCGAGGTCCAAGGAGGTGGGACCAAAGGGAGAGTTAGTTAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGAGGTCCAAGGAGGTGGGACCAAAGGGAGAGTTAGTTAAAGTC  50

seq1  AGAATAAAAACCATGGTAATGCTTGTGTAGGGATGGGGAAGGTTTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAACCATGGTAATGCTTGTGTAGGGATGGGGAAGGTTTTCTGG  100

seq1  AGGATCCTTGGCACTAGGGTCCTGAATGCCTGATACATGGAAGTGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTTGGCACTAGGGTCCTGAATGCCTGATACATGGAAGTGAAAGA  150

seq1  AATCTCTTAATTTCTTACTTTCTTCTAAGACATTATGACATGTACACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTTAATTTCTTACTTTCTTCTAAGACATTATGACATGTACACATT  200

seq1  CAGACCCTTAACAGAGTGATAGCAGAAAAACATTAACAAAAAACAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTTAACAGAGTGATAGCAGAAAAACATTAACAAAAAACAAAAAA  250

seq1  ACCCGAGAACCCACAGTTAGAGATCAAAGCAAGGAGATCTTAAAGCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAGAACCCACAGTTAGAGATCAAAGCAAGGAGATCTTAAAGCTGAT  300

seq1  ATCATCCTAGGAACTCAGGCATACTGATAGGTCAGGACAAACTGAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTAGGAACTCAGGCATACTGATAGGTCAGGACAAACTGAAGAGG  350

seq1  GTCGTATGAGCACCTGTGCTCCAGAAAATAACTGCATCAAATGCTTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTATGAGCACCTGTGCTCCAGAAAATAACTGCATCAAATGCTTACTT  400

seq1  AGGGATTGATTTTGCCAATATTATATTGGTACTATTGGAAGGGGTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTGATTTTGCCAATATTATATTGGTACTATTGGAAGGGGTGAATT  450

seq1  AGAGAAAGCATCCAATGGAGGAGGGAATCACAACATGTCTTGGGAGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGCATCCAATGGAGGAGGGAATCACAACATGTCTTGGGAGAGGG  500

seq1  AGTTGTGCAAACATCATTTTTAGAAAGCAGAGAAGAGGAATTTTTGCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCAAACATCATTTTTAGAAAGCAGAGAAGAGGAATTTTTGCCAT  550

seq1  TCTCTTATGAATATCAATGACCAGATGTGA-TTCTCATGGAGAATTGAGA  599
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTCTTATGAATATCAATGACCAGATGTGATTTCTCATGGAGAATTGAGA  600

seq1  CCAGGGCAGCCAACATCCCCCCAAAAGCTGAT-GGGTAGGAGGGGATCTC  648
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  CCAGGGCAGCCAACATCCCTCCAAAAGCTGATGGGGTAGGAGGGGATCTC  650

seq1  TCAAGAGGGCTGGGTGATTAACTACTAATTTTTTGATTGGCT  690
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGGGCTGGGTGATTAACTACTAATTTTTTGATTGGCT  692

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information