BAC Information

Click to search

BAC

Clone NameB6Ng01-010A16
Chromosome8 (Build37)
Map Location 84,363,319 - 84,364,386
singlet/doubletsinglet
Overlap geneInpp4b
Upstream geneGab1, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneLOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010A16.bB6Ng01-010A16.g
ACCDH845825DH845826
length1,0571,151
definitionDH845825|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A16, 5' end.DH845826|Mus musculus domesticus DNA, BAC clone: B6Ng01-010A16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcagccacaggtagagaagattgatcaattggaaataagtta
gagatatatagaggtaaaacatcctggtgagctactgcacagtagagagg
tgtgtgtaacacttagatattatatatttcaaaaggagaaaaatttcagt
gttttcatgataaagaaatgataatacaaagacttttctagtgctcaatt
tgaccatggaggaggccacacgttaagaagcacaaacatgaggcctctgg
cattttcatttgtttcagctgacagtcttccagaaaatgaaggcctctct
tctacagctgtgaagcatattccatttgacttacagtctgtggatggtta
gggaccagatctttcctagtggagcctctgaatgccaacataggcagctt
gtccttggaccacagccttgtgagatccgcctggaaaaccagtcacccca
cgtctggagttcaaagctgtacaaagctctatgccagttaatatagagac
acgctggttactggccattagctgatgactttctctcatgtggctatgtg
gagacttggctctctaagtctgaaggcataccaaaccctctcgagaaatt
ctccacgtagatgcaacagatattcctgacatatgctgttggtggtgggg
ttgagttaggggctcacacctgagtcctaagacacttgtttacaggatag
ttatacctctggaggaggtagacatttttccctatcttaatttcatgttt
caatatcaggggattcattactgatctcaacgggggtctagagtagcgtt
tatgttatgaaacagactctgattctgtatcaaattcacttccaaataca
ttgccaggttggaccatattctttgtggaggatgtatgctctttaatggg
tattcccatctttatctatctagaggagcttgcttcattctacctatcat
acagaaatggactatgtgagctctgaaaaatgcagccaggacaatctgat
attatgccttctcttggctgctctagatctccagcagattgactgccata
ggcttag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatttagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcgctattggatggatcacatggcccccaa
tgaagagctagagaaagtaccaaagaagctaaagggatctgcaccctata
gtggacacataatgactaccagtacccggagctctgactctagctgcata
tgcatcaaagatgctagtcgcatcactggaaagaaggccatggaccgcaa
cttatatgcctcagtcagggaacgccaggccattaaagggaatggtgtgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84363319_84364386
seq2: B6Ng01-010A16.b_46_1102

seq1  GAATTCAGGCAGCCACAGGTAGAGAAGATTGATCAATTGGAAATAAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGCCACAGGTAGAGAAGATTGATCAATTGGAAATAAGTTA  50

seq1  GAGATATATAGAGGTAAAACATCCTGGTGAGCTACTGCACAGTAGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATATAGAGGTAAAACATCCTGGTGAGCTACTGCACAGTAGAGAGG  100

seq1  TGTGTGTAACACTTAGATATTATATATTTCAAAAGGAGAAAAATTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTAACACTTAGATATTATATATTTCAAAAGGAGAAAAATTTCAGT  150

seq1  GTTTTCATGATAAAGAAATGATAATACAAAGACTTTTCTAGTGCTCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGATAAAGAAATGATAATACAAAGACTTTTCTAGTGCTCAATT  200

seq1  TGACCATGGAGGAGGCCACACGTTAAGAAGCACAAACATGAGGCCTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGGAGGAGGCCACACGTTAAGAAGCACAAACATGAGGCCTCTGG  250

seq1  CATTTTCATTTGTTTCAGCTGACAGTCTTCCAGAAAATGAAGGCCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCATTTGTTTCAGCTGACAGTCTTCCAGAAAATGAAGGCCTCTCT  300

seq1  TCTACAGCTGTGAAGCATATTCCATTTGACTTACAGTCTGTGGATGGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGCTGTGAAGCATATTCCATTTGACTTACAGTCTGTGGATGGTTA  350

seq1  GGGACCAGATCTTTCCTAGTGGAGCCTCTGAATGCCAACATAGGCAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAGATCTTTCCTAGTGGAGCCTCTGAATGCCAACATAGGCAGCTT  400

seq1  GTCCTTGGACCACAGCCTTGTGAGATCCGCCTGGAAAACCAGTCACCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGGACCACAGCCTTGTGAGATCCGCCTGGAAAACCAGTCACCCCA  450

seq1  CGTCTGGAGTTCAAAGCTGTACAAAGCTCTATGCCAGTTAATATAGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGGAGTTCAAAGCTGTACAAAGCTCTATGCCAGTTAATATAGAGAC  500

seq1  ACGCTGGTTACTGGCCATTAGCTGATGACTTTCTCTCATGTGGCTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGGTTACTGGCCATTAGCTGATGACTTTCTCTCATGTGGCTATGTG  550

seq1  GAGACTTGGCTCTCTAAGTCTGAAGGCATACCAAACCCTCTCGAGAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGGCTCTCTAAGTCTGAAGGCATACCAAACCCTCTCGAGAAATT  600

seq1  CTCCACGTAGATGCAACAGATATTCCTGACATATGCTGTTGGTGGTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACGTAGATGCAACAGATATTCCTGACATATGCTGTTGGTGGTGGGG  650

seq1  TTGAGTTAGGGGCTCACACCTGAGTCCTAAGACACTTGTTTACAGGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAGGGGCTCACACCTGAGTCCTAAGACACTTGTTTACAGGATAG  700

seq1  TTATACCTCTGGAGGAGGTAGACATTTTTCCCTATCTTAATTTCATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTCTGGAGGAGGTAGACATTTTTCCCTATCTTAATTTCATGTTT  750

seq1  CAATATCA-GGGATTCATTACTGATCTCAACGGGGGTCTAGAGTAGCGTT  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAGGGGATTCATTACTGATCTCAACGGGGGTCTAGAGTAGCGTT  800

seq1  TATGTTATGAAACAGACTCTGATTCTGTATCAAATTCACTTCCAAATACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATGAAACAGACTCTGATTCTGTATCAAATTCACTTCCAAATACA  850

seq1  TTGCCAGGTTGGACCATATTCTTTGTGGAGGATGTATGCTCTTTAATGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGTTGGACCATATTCTTTGTGGAGGATGTATGCTCTTTAATGGG  900

seq1  TATTCCCATCTATATCTATCTAGAGGAGCTTGCTTCATTCATACCTATCA  949
      ||||||||||| |||||||||||||||||||||||||||| |||||||| 
seq2  TATTCCCATCTTTATCTATCTAGAGGAGCTTGCTTCATTC-TACCTATC-  948

seq1  ATACAGAAATGGACCTATGTGAGCTCTGAAAAAATGCAGCCAGGGACAAA  999
      ||||||||||||| |||||||||||||| ||||||||||||| |||||| 
seq2  ATACAGAAATGGA-CTATGTGAGCTCTG-AAAAATGCAGCCA-GGACAA-  994

seq1  TTCTGGATATTATGGCCTTCTCCTTGGCTGGCTCTAGATCTCCAGCAGAT  1049
       ||| |||||||| ||||||| ||||||| ||||||||||||||||||||
seq2  -TCT-GATATTAT-GCCTTCT-CTTGGCT-GCTCTAGATCTCCAGCAGAT  1039

seq1  TGTACTGCCATAGGCTTAG  1068
      || ||||||||||||||||
seq2  TG-ACTGCCATAGGCTTAG  1057