BAC Information

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BAC

Clone NameB6Ng01-011P22
Chromosome8 (Build37)
Map Location 110,711,203 - 110,712,311
singlet/doubletsinglet
Overlap genenone
Upstream geneCyb5b, LOC100042791, Nfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011P22.bB6Ng01-011P22.g
ACCDH847212DH847213
length1,1021,162
definitionDH847212|Mus musculus domesticus DNA, BAC clone: B6Ng01-011P22, 5' end.DH847213|Mus musculus domesticus DNA, BAC clone: B6Ng01-011P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaggggagaaaaagcaaaaataggaagcatcttgcttgctcc
tagagatggggttggttttcttctttactgttttatcccaatgtttgtca
ctctttggagcattagcataggaaaaagcctgttgccccacatggaccac
agcatggtctccatagtgacggcagattttgctgtcctctcataggcagt
tggggaaacatagatttggattcctgtagacttgaagaacaaccatcatc
ttctaaaatctagattttagttgtaattggtcacaaatataaatgtaggc
ctagtaagatggctcatcaggtaaaggcacttgctgccaatcctggcccc
tgagctcaatccttgttggtacctatgtggtaggaggcagccaactccct
tgtggtgtcctttgagccctcacaaaccatggcatgcgcctcctccaata
cataaacaaatgtaaacaattctttaaaaaacatatataagtgaaaattc
agttcctgatttttttcgctttaccaaattctcacaaaattaaatcttcc
acttcagtttctactaatctttaatttcagagaatttacagctcacactt
ttcccttctcagaagaaataaaatcctgggagcttcatggacaatagctg
gtccttaaatatcctaaatgtctcttcttttcagctttaatcttctcttt
cctgtttattaattcattgaattcccatgcccttttgccaagtttccttt
gaatcttccattggaaatcttccttcctcctctccctccctgtcctcttc
ccgctcttctcctctttttcttcaaatccaagtgttgtatccccatgctc
ccttttgtgagctttagacagtgagtccagatgaatgttttacttgggtg
tattttgtcaaaggcaaatcgcacaggatggaaagtgtgaggcattgctt
tcagaatgtagcgttcctgttgaccattttttttttcagatgtagatcac
ttttgtcctttggctagtcagtgccagggtgctctggaatacctctggct
gtctcttttgtcggaaatgctttatgcaaatttttatagacagctaagat
tt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggaaaaagaggaacactcctccattgttggtg
ggattgcaggcttataaaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagatggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcccagcaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaagagctaaagggatctgcaaccctat
aggtggacacattatgagctatcagttactccggagctctttgactctag
ctgcattataatcaaagatgctagtcgcatcacttgaaggaaggccattg
aactgcaactttattgcccagttcaggattccaagcaaaagggggaatgc
gtgccagggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_110711203_110712311
seq2: B6Ng01-011P22.b_46_1147

seq1  GAATTCCCAAGGGGAGAAAAAGCAAAAATAGGAAGCATCTTGCTTGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGGGGAGAAAAAGCAAAAATAGGAAGCATCTTGCTTGCTCC  50

seq1  TAGAGATGGGGTTGGTTTTCTTCTTTACTGTTTTATCCCAATGTTTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGGGGTTGGTTTTCTTCTTTACTGTTTTATCCCAATGTTTGTCA  100

seq1  CTCTTTGGAGCATTAGCATAGGAAAAAGCCTGTTGCCCCACATGGACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGAGCATTAGCATAGGAAAAAGCCTGTTGCCCCACATGGACCAC  150

seq1  AGCATGGTCTCCATAGTGACGGCAGATTTTGCTGTCCTCTCATAGGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGTCTCCATAGTGACGGCAGATTTTGCTGTCCTCTCATAGGCAGT  200

seq1  TGGGGAAACATAGATTTGGATTCCTGTAGACTTGAAGAACAACCATCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAACATAGATTTGGATTCCTGTAGACTTGAAGAACAACCATCATC  250

seq1  TTCTAAAATCTAGATTTTAGTTGTAATTGGTCACAAATATAAATGTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATCTAGATTTTAGTTGTAATTGGTCACAAATATAAATGTAGGC  300

seq1  CTAGTAAGATGGCTCATCAGGTAAAGGCACTTGCTGCCAATCCTGGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAGATGGCTCATCAGGTAAAGGCACTTGCTGCCAATCCTGGCCCC  350

seq1  TGAGCTCAATCCTTGTTGGTACCTATGTGGTAGGAGGCAGCCAACTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCAATCCTTGTTGGTACCTATGTGGTAGGAGGCAGCCAACTCCCT  400

seq1  TGTGGTGTCCTTTGAGCCCTCACAAACCATGGCATGCGCCTCCTCCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTCCTTTGAGCCCTCACAAACCATGGCATGCGCCTCCTCCAATA  450

seq1  CATAAACAAATGTAAACAATTCTTTAAAAAACATATATAAGTGAAAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACAAATGTAAACAATTCTTTAAAAAACATATATAAGTGAAAATTC  500

seq1  AGTTCCTGATTTTTTTCGCTTTACCAAATTCTCACAAAATTAAATCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGATTTTTTTCGCTTTACCAAATTCTCACAAAATTAAATCTTCC  550

seq1  ACTTCAGTTTCTACTAATCTTTAATTTCAGAGAATTTACAGCTCACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTTTCTACTAATCTTTAATTTCAGAGAATTTACAGCTCACACTT  600

seq1  TTCCCTTCTCAGAAGAAATAAAATCCTGGGAGCTTCATGGACAATAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTCAGAAGAAATAAAATCCTGGGAGCTTCATGGACAATAGCTG  650

seq1  GTCCTTAAATATCCTAAATGTCTCTTCTTTTCAGCTTTAATCTTCTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAAATATCCTAAATGTCTCTTCTTTTCAGCTTTAATCTTCTCTTT  700

seq1  CCTGTTTATTAATTCATTGAATTCCCATGCCCTTTTGCCAAGTTTCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTATTAATTCATTGAATTCCCATGCCCTTTTGCCAAGTTTCCTTT  750

seq1  GAATCTTCCATTGGAAATCTTCCTTCCTCCTCTCCCTCCCTGTCCTCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCCATTGGAAATCTTCCTTCCTCCTCTCCCTCCCTGTCCTCTTC  800

seq1  CCGCTCTTCTCCTCTTTTTCTTCAAATCCAAGTGTTGTATCCCCATGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCTTCTCCTCTTTTTCTTCAAATCCAAGTGTTGTATCCCCATGCTC  850

seq1  CC-TTTGTGAGCTTTAGACAGTGAGTCCAGATGAATGTTTTACTTGGGTG  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTGAGCTTTAGACAGTGAGTCCAGATGAATGTTTTACTTGGGTG  900

seq1  TATTTTGTCAAAGGCAAATCGCACAGGATGGAAAGTGTGAGGCATTGCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTCAAAGGCAAATCGCACAGGATGGAAAGTGTGAGGCATTGCTT  950

seq1  TCAGAATGTAGGCGTTCCTGTTGACCATTTTTTTTTTCAGATGTTAGAAT  999
      |||||||||| |||||||||||||||||||||||||||||||| ||| ||
seq2  TCAGAATGTA-GCGTTCCTGTTGACCATTTTTTTTTTCAGATG-TAG-AT  997

seq1  CAC-TTTGTCCTTTGGCTAGTCAGTGGCAGGGTGCTCT-GAATACCCTCT  1047
      ||| |||||||||||||||||||||| ||||||||||| ||||| |||| 
seq2  CACTTTTGTCCTTTGGCTAGTCAGTGCCAGGGTGCTCTGGAATA-CCTC-  1045

seq1  TGGCTGTCTCCTTTTGTTCGTAAATTGCTTTATTGCAATATTTTTATAGA  1097
      ||||||||| |||||| ||| ||| ||||||| ||||| |||||||||||
seq2  TGGCTGTCT-CTTTTG-TCGGAAA-TGCTTTA-TGCAA-ATTTTTATAGA  1090

seq1  CAGTTAAGATTT  1109
      ||| ||||||||
seq2  CAGCTAAGATTT  1102