BAC Information

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BAC

Clone NameB6Ng01-012B16
Chromosome8 (Build37)
Map Location 91,423,582 - 91,562,576
singlet/doubletdoublet
Overlap geneSall1
Upstream geneZfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
Downstream geneLOC100041089, EG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012B16.bB6Ng01-012B16.g
ACCDH847287DH847288
length1,1181,144
definitionDH847287|Mus musculus domesticus DNA, BAC clone: B6Ng01-012B16, 5' end.DH847288|Mus musculus domesticus DNA, BAC clone: B6Ng01-012B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,561,472 - 91,562,576)(91,423,582 - 91,424,709)
sequence
gaattcatgtttcatcaagcctatttttaagtttggcataatagaagatt
ctagatgagaaaatgtgaactgttttttggtcttgttttgttttgttgcg
atttgcttcaggctgcaaatactttctaaatgttaaaaaacaagcacccg
ggaaagcctgctgaggcaggagataaactgggaaggtagcttttcggcat
tgagcaattgttggtgtattttacatccaatttctgctatggctcagggc
acaagtaccaaattatagggtgctgtttgggaaaccgtttcttttctcta
aggttggagacttctagttgtctttttaccaacaatatccttcagaaggc
aaaagcccacatttttctggtagcgaatctggagggcgatgggaggaggg
aattcaggcaggttccgggtttcaaaacttagccaagctcactcagtgtg
aagtaaccagaaaaaaatcgaaattcttctgcagcttaaatgtgtttttt
tccaacacagtccctagtgcagaaaacctgtgttctaaaatattctttga
ggagagaaagataatattaacctgaggcttgacactcctcccccaagaag
gaaaaaaagttggtgtgccaggctttagaaaacctggacgtgtagagctg
ttttaacctttgccagcctcctcccatgcagaggtgacaaggtccagatc
ataatgtgtccttcagtgtcttcccggtgacccccaatttgagtctttgc
tagtcacttagcaggaacttggtagtttattttagtttctccttatcagc
ttggcttcttttcctaaccttattcccccgccacccccagatgccagacc
cccaaaggggaagattgacaggtagttccacggctcagctttcaccctcc
aacaacagggaattagttttcttgtgactttgccaatgtttgtgtagtca
gttgtttacgatctcgccttaaaggagtctcctctttttacgcgtccact
gggaatagggaagccacagaatagttgttgaacaaatcccttgctggttg
gaatcctcatctaaggttcacttttaattcatccatagggaagacatttt
tcctccttcttgtgagcc
gaattccatgcttaggtgatgagtctgttgtactgacagtgctggctgcc
ttgtcttttctcagctgagatcctctggttctagagaggggaagacagaa
acctggctggctctaaaacctagggtgtctgagagctgaccaataagaac
cacagaaagattttgttccaatttcagccaaggaaatgcaagccctcagc
agaaaccagtagccaaatcccacacctgtcaaaggagttgcaccacactt
cctggagaaaggaaggaactggaaggaaatcagaggcctctccccaagca
ggtcctggggagatcaaagcttggtggccccagaagaagactgactgctt
ctgaggcccagaggagctactcaggggctgtgcatgtaacccttgcccca
gctcagaagagagtctaagctgagcctcccagcatataactttccccagt
ctgtcatctctaaactctccttgggtcttgttatattcctggctatgttt
agaagctcgagccaagtaatagtaactgcactttgaaaccgaggaaggat
tcctatgatgtcattaacagctgcctggagcgcctctgcaacatcctctg
gtcaggctgagttggttttccttccagagaaggaaggcactcctggggga
ggtgacctatttcaggaaacaggttctgtccctaaaagtcacataccctg
aaatcctgattcctccaggcccaagacttcctccagtctggtgccatatc
tggccagttaagggaagtgcccaggtaggcaagaacctgcagggggaagg
aggctggtgtaagcagaagaagaaacagcttaacagaggaaaggaaccca
gctcaggagctttgtgctaacagggctgtcttggggctcacacctttatt
ccctcagtttagaaaaccactctcttcactcccaaaagccagaggaggaa
aaagtagaccaccttgagcttagcaggctctgctttgacaccagggaaga
tatcttttgagggcagaatcagtaggattgcaatggattttattgtaagt
tattttaattgctggtatccaattcctgaaccccccccaccccccagtta
aacctatgaaaactggagaagctagttgggatttttgttcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91561472_91562576
seq2: B6Ng01-012B16.b_41_1158 (reverse)

seq1  GGCTCACAATGAAAG-GGGAAAATGTCTTCCCTATGGATGAATT-AAAGT  48
      ||||||||| ||| | || ||||||||||||||||||||||||| |||||
seq2  GGCTCACAA-GAAGGAGGAAAAATGTCTTCCCTATGGATGAATTAAAAGT  49

seq1  GAACACTAGATGGGGA-TCCAA-CAGCAAGGG-TTTGTTCACAAACTACT  95
      ||||  |||||| ||| ||||| ||||||||| ||||||||  ||||| |
seq2  GAACCTTAGATGAGGATTCCAACCAGCAAGGGATTTGTTCAACAACTATT  99

seq1  CTGTGGCTTTCCTATT-CCAGT-GACGCGT-AAAAGA-GAGACTCC-TTA  140
      ||||||||| |||||| ||||| ||||||| |||||| |||||||| |||
seq2  CTGTGGCTTCCCTATTCCCAGTGGACGCGTAAAAAGAGGAGACTCCTTTA  149

seq1  AGGCGAGATC-TAAAC-ACTGACTACACAAACATTGGCAAAGTCACAAG-  187
      |||||||||| ||||| |||||||||||||||||||||||||||||||| 
seq2  AGGCGAGATCGTAAACAACTGACTACACAAACATTGGCAAAGTCACAAGA  199

seq1  AAACTAAATCCCTGTTGTTGGAGGGTG-AAGCTGAGCCGTGGGAACTACC  236
      ||||||| ||||||||||||||||||| |||||||||||| |||||||||
seq2  AAACTAATTCCCTGTTGTTGGAGGGTGAAAGCTGAGCCGT-GGAACTACC  248

seq1  TGTCAATCTTCCCCTTTGGGGGTCTGGCATCTGGGGGTGGCGGGGGAATA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATCTTCCCCTTTGGGGGTCTGGCATCTGGGGGTGGCGGGGGAATA  298

seq1  AGGTTAGGAAAAGAAGCCAAGCTGATAAGGAGAAACTAAAATAAACTACC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGGAAAAGAAGCCAAGCTGATAAGGAGAAACTAAAATAAACTACC  348

seq1  AAGTTCCTGCTAAGTGACTAGC-AAGACTCAAATTGGGGGTCACCGGGAA  385
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGTTCCTGCTAAGTGACTAGCAAAGACTCAAATTGGGGGTCACCGGGAA  398

seq1  GACACTGAAGGACACATTATGATCTGGACCTTGTCACCTCTGCATGGGAG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGAAGGACACATTATGATCTGGACCTTGTCACCTCTGCATGGGAG  448

seq1  GAGGCTGGCAAAGGTTAAAACAGCTCTACACGTCCAGGTTTTCTAAAGCC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGGCAAAGGTTAAAACAGCTCTACACGTCCAGGTTTTCTAAAGCC  498

seq1  TGGCACACCAACTTTTTTTCCTTCTTGGGGGAGGAGTGTCAAGCCTCAGG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACCAACTTTTTTTCCTTCTTGGGGGAGGAGTGTCAAGCCTCAGG  548

seq1  TTAATATTATCTTTCTCTCCTCAAAGAATATTTTAGAACACAGGTTTTCT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTATCTTTCTCTCCTCAAAGAATATTTTAGAACACAGGTTTTCT  598

seq1  GCACTAGGGACTGTGTTGGAAAAAAACACATTTAAGCTGCAGAAGAATTT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGGACTGTGTTGGAAAAAAACACATTTAAGCTGCAGAAGAATTT  648

seq1  CGATTTTTTTCTGGTTACTTCACACTGAGTGAGCTTGGCTAAGTTTTGAA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTTTTTCTGGTTACTTCACACTGAGTGAGCTTGGCTAAGTTTTGAA  698

seq1  ACCCGGAACCTGCCTGAATTCCCTCCTCCCATCGCCCTCCAGATTCGCTA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGGAACCTGCCTGAATTCCCTCCTCCCATCGCCCTCCAGATTCGCTA  748

seq1  CCAGAAAAATGTGGGCTTTTGCCTTCTGAAGGATATTGTTGGTAAAAAGA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAAATGTGGGCTTTTGCCTTCTGAAGGATATTGTTGGTAAAAAGA  798

seq1  CAACTAGAAGTCTCCAACCTTAGAGAAAAGAAACGGTTTCCCAAACAGCA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAAGTCTCCAACCTTAGAGAAAAGAAACGGTTTCCCAAACAGCA  848

seq1  CCCTATAATTTGGTACTTGTGCCCTGAGCCATAGCAGAAATTGGATGTAA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAATTTGGTACTTGTGCCCTGAGCCATAGCAGAAATTGGATGTAA  898

seq1  AATACACCAACAATTGCTCAATGCCGAAAAGCTACCTTCCCAGTTTATCT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACCAACAATTGCTCAATGCCGAAAAGCTACCTTCCCAGTTTATCT  948

seq1  CCTGCCTCAGCAGGCTTTCCCGGGTGCTTGTTTTTTAACATTTAGAAAGT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCAGCAGGCTTTCCCGGGTGCTTGTTTTTTAACATTTAGAAAGT  998

seq1  ATTTGCAGCCTGAAGCAAATCGCAACAAAACAAAACAAGACCAAAAAACA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGCCTGAAGCAAATCGCAACAAAACAAAACAAGACCAAAAAACA  1048

seq1  GTTCACATTTTCTCATCTAGAATCTTCTATTATGCCAAACTTAAAAATAG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACATTTTCTCATCTAGAATCTTCTATTATGCCAAACTTAAAAATAG  1098

seq1  GCTTGATGAAACATGAATTC  1105
      ||||||||||||||||||||
seq2  GCTTGATGAAACATGAATTC  1118

seq1: chr8_91423582_91424709
seq2: B6Ng01-012B16.g_63_1206

seq1  GAATTCCATGCTTAGGTGATGAGTCTGTTGTACTGACAGTGCTGGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTTAGGTGATGAGTCTGTTGTACTGACAGTGCTGGCTGCC  50

seq1  TTGTCTTTTCTCAGCTGAGATCCTCTGGTTCTAGAGAGGGGAAGACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTCTCAGCTGAGATCCTCTGGTTCTAGAGAGGGGAAGACAGAA  100

seq1  ACCTGGCTGGCTCTAAAACCTAGGGTGTCTGAGAGCTGACCAATAAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTGGCTCTAAAACCTAGGGTGTCTGAGAGCTGACCAATAAGAAC  150

seq1  CACAGAAAGATTTTGTTCCAATTTCAGCCAAGGAAATGCAAGCCCTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGATTTTGTTCCAATTTCAGCCAAGGAAATGCAAGCCCTCAGC  200

seq1  AGAAACCAGTAGCCAAATCCCACACCTGTCAAAGGAGTTGCACCACACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGTAGCCAAATCCCACACCTGTCAAAGGAGTTGCACCACACTT  250

seq1  CCTGGAGAAAGGAAGGAACTGGAAGGAAATCAGAGGCCTCTCCCCAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAAAGGAAGGAACTGGAAGGAAATCAGAGGCCTCTCCCCAAGCA  300

seq1  GGTCCTGGGGAGATCAAAGCTTGGTGGCCCCAGAAGAAGACTGACTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGGGGAGATCAAAGCTTGGTGGCCCCAGAAGAAGACTGACTGCTT  350

seq1  CTGAGGCCCAGAGGAGCTACTCAGGGGCTGTGCATGTAACCCTTGCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCCAGAGGAGCTACTCAGGGGCTGTGCATGTAACCCTTGCCCCA  400

seq1  GCTCAGAAGAGAGTCTAAGCTGAGCCTCCCAGCATATAACTTTCCCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAGAGAGTCTAAGCTGAGCCTCCCAGCATATAACTTTCCCCAGT  450

seq1  CTGTCATCTCTAAACTCTCCTTGGGTCTTGTTATATTCCTGGCTATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCTCTAAACTCTCCTTGGGTCTTGTTATATTCCTGGCTATGTTT  500

seq1  AGAAGCTCGAGCCAAGTAATAGTAACTGCACTTTGAAACCGAGGAAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCGAGCCAAGTAATAGTAACTGCACTTTGAAACCGAGGAAGGAT  550

seq1  TCCTATGATGTCATTAACAGCTGCCTGGAGCGCCTCTGCAACATCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGATGTCATTAACAGCTGCCTGGAGCGCCTCTGCAACATCCTCTG  600

seq1  GTCAGGCTGAGTTGGTTTTCCTTCCAGAGAAGGAAGGCACTCCTGGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTGAGTTGGTTTTCCTTCCAGAGAAGGAAGGCACTCCTGGGGGA  650

seq1  GGTGACCTATTTCAGGAAACAGGTTCTGTCCCTAAAAGTCACATACCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCTATTTCAGGAAACAGGTTCTGTCCCTAAAAGTCACATACCCTG  700

seq1  AAATCCTGATTCCTCCAGGCCCAAGACTTCCTCCAGTCTGGTGCCATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGATTCCTCCAGGCCCAAGACTTCCTCCAGTCTGGTGCCATATC  750

seq1  TGGCCAGTTAAGGGAAGTGCCCAGGTAGGCAAGAACCTGCAGGGGGAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGTTAAGGGAAGTGCCCAGGTAGGCAAGAACCTGCAGGGGGAAGG  800

seq1  AGGCTGGTGTAAGCAGAAGAAGAAACAGCTTAACAGAGGAAAGGAA-CCA  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGCTGGTGTAAGCAGAAGAAGAAACAGCTTAACAGAGGAAAGGAACCCA  850

seq1  GC-CAGGAGCTTTGTGCTAACAGGGCTGTCTT-GGGCTCACACC-TTATT  896
      || ||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  GCTCAGGAGCTTTGTGCTAACAGGGCTGTCTTGGGGCTCACACCTTTATT  900

seq1  CCCTCAGTTTAG-AAACCACTCTCTTCACTCCCAAAAGCCAGA-GAGGAA  944
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  CCCTCAGTTTAGAAAACCACTCTCTTCACTCCCAAAAGCCAGAGGAGGAA  950

seq1  AAAGTAGACCACC-TGAGCTAGCCAGGCTCTGCTTTGACCACAGGGAAGA  993
      ||||||||||||| ||||||   ||||||||||||||||  |||||||||
seq2  AAAGTAGACCACCTTGAGCTTAGCAGGCTCTGCTTTGACACCAGGGAAGA  1000

seq1  TATC-TTTGAGGGCAG-ATCAGTA-GATTGCAATGGATTCTATTGTAAGT  1040
      |||| ||||||||||| ||||||| |||||||||||||| ||||||||||
seq2  TATCTTTTGAGGGCAGAATCAGTAGGATTGCAATGGATTTTATTGTAAGT  1050

seq1  TATATCTATTGCTTGTATCCAATTCCTGACCCCACCCCA-CCCCCAGT--  1087
      ||| |  |||||| ||||||||||||||| ||| ||||| ||||||||  
seq2  TATTTTAATTGCTGGTATCCAATTCCTGAACCCCCCCCACCCCCCAGTTA  1100

seq1  AAACTTTGAAAACTGAAG-AGCTAGTTTGGATTTT--GTCCTGG  1128
      || || ||||||||| || |||||||| |||||||   ||||||
seq2  AACCTATGAAAACTGGAGAAGCTAGTTGGGATTTTTGTTCCTGG  1144