BAC Information

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BAC

Clone NameB6Ng01-012I18
Chromosome8 (Build37)
Map Location 103,353,932 - 103,355,036
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012I18.bB6Ng01-012I18.g
ACCDH847611DH847612
length1,2581,115
definitionDH847611|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I18, 5' end.DH847612|Mus musculus domesticus DNA, BAC clone: B6Ng01-012I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttatgtacaataacaatgccatgtccaaaactcagcgtcttaag
agttctataacttctggcatttctaagctttgcaccaatgattggcaaat
gatctctgggcatgtaacaaggggctgactatcatatctcacatggacat
gggcacgcgatagtcactttgtttctgtattttcatgagttgtgaatatc
tgtgctactcaccatttattatgcaaagtaacatctctgataagagtttg
tggatgcactaatctagggtgataaagataatccagaagtaggagtcaat
ttatgactatgcctatttagcagaataattataataagatcttccctaga
atctatgtcatggctcacttaacagagattgtgtaaaatgtaattcttct
tatcaacaacttcctcacctaaggctttggaaacgatgagaaagattact
tgggatgataatacaagccagaaaattagatactttagtatgaatttgtg
actcctagtaatgtcagaagaagaattataagaaaccaatatttctatgg
aaccatgaagtctacacatcaaaataattaccagcatggagagataacct
aaaggtaaaggagtgatgcaagtatcttggtagtaacccactcaacaaga
aggaaatcatgtctggcactagaaatcgagaaagctactcaaggctagta
aagtcatggatcttagaaaataacctacaaccaccacaacaataaactat
catatctcttaaaccttagcaatatgtaaatatttatacttgtatccaca
gataagtataagtaaagtcttcaacacttatcaagaaacaactttgtaac
agatggagaccttttacaggaaaccacaatcaatcaagtgtagcattgtg
gagcccagtcccaatacatgtagacaacaactccctcacccaaggctctg
ggaacaatgggatagagggtttgggatgataatacagccagaacattaca
tagttactatgagtttgtgacttttagacatgtcagaaggattcactata
aattctcactatcatggactataacacagtgctgacaaggacaacaataa
tagatgtagagtggagaaaagactacagttgacaatgtttcaacctagac
tgttagccaataagaaattctggaatttgccatatgtttcctcggagaga
gagcctagacaaattgatccactctaagaattacagaagtgggtgtacta
tatgttgc
gaattcttttcctcaggctcctttccatttccgtccctgtgattctttca
gacaggaacaattatgggtcagagttgtgactgtggaatggcccccaggg
ttttctagaggaacagaataaatgagatgaatctctttgtttttttcttt
gtttatttcattttatctatcatctagttagctatcatgtagctatctat
ctactatttatatctatctgaatctatatttataagaaaatttactcaac
tttaaaacagcaacagaagacttaaataggaaagctgaaaacccagtagt
aattctggatgccataccaattggagtattcacacagtggctttctctca
ctcatgagagaggaggtgacaactggctgctgctgggtgcacaacactaa
gtgcctacaaagtcatgatatggcatgagaatcccagaaatttctttgat
agttgctggaacttaatgtacattagaagcttggaaacacttgctttgat
atcaaggaagaggtaaggctctcttctcaggtgattctatgatttctatg
gatttgaaagaaaactaagtgtaatacaggaagtattctaatctttggct
catagatctttatattttacatggccagagacacatggagaaaatacaaa
taaatccattttttctacaattaaaagagttatttaatttttttcacacc
aagcattttgattgaaatattctcccaggttctccccatcctcccactga
catatcttcatataattgctcactgtgtccctgtctccctctgttctctg
tgtctctgtctgtctctgtctatgtctctgtctctctctgtctctctgtc
tctctctttctctctctctctctaacaaaatggaaaaacaaaactgacaa
tagttatcagtaaaggcaaatttttatcccaactggaaaaaaattaattg
gggaaaatttaacaacaacaaccaagaactttgaacagttttgcactggt
caactatttcttggcattaaagcctccccttgtatttaagccgcttatac
ccaatgacttctacactgtagaaaaatgaattcttccctttcaagtatta
ttcacttgcacacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103353932_103355036
seq2: B6Ng01-012I18.g_65_1179

seq1  GAATTCTTTTCCTCAGGCTCCTTTCCATTTCCGTCCCTGTGATTCTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCCTCAGGCTCCTTTCCATTTCCGTCCCTGTGATTCTTTCA  50

seq1  GACAGGAACAATTATGGGTCAGAGTTGTGACTGTGGAATGGCCCCCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAACAATTATGGGTCAGAGTTGTGACTGTGGAATGGCCCCCAGGG  100

seq1  TTTTCTAGAGGAACAGAATAAATGAGATGAATCTCTTTGTTTTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGAGGAACAGAATAAATGAGATGAATCTCTTTGTTTTTTTCTTT  150

seq1  GTTTATTTCATTTTATCTATCATCTAGTTAGCTATCATGTAGCTATCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTCATTTTATCTATCATCTAGTTAGCTATCATGTAGCTATCTAT  200

seq1  CTACTATTTATATCTATCTGAATCTATATTTATAAGAAAATTTACTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTTATATCTATCTGAATCTATATTTATAAGAAAATTTACTCAAC  250

seq1  TTTAAAACAGCAACAGAAGACTTAAATAGGAAAGCTGAAAACCCAGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAGCAACAGAAGACTTAAATAGGAAAGCTGAAAACCCAGTAGT  300

seq1  AATTCTGGATGCCATACCAATTGGAGTATTCACACAGTGGCTTTCTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGATGCCATACCAATTGGAGTATTCACACAGTGGCTTTCTCTCA  350

seq1  CTCATGAGAGAGGAGGTGACAACTGGCTGCTGCTGGGTGCACAACACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGAGAGGAGGTGACAACTGGCTGCTGCTGGGTGCACAACACTAA  400

seq1  GTGCCTACAAAGTCATGATATGGCATGAGAATCCCAGAAATTTCTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACAAAGTCATGATATGGCATGAGAATCCCAGAAATTTCTTTGAT  450

seq1  AGTTGCTGGAACTTAATGTACATTAGAAGCTTGGAAACACTTGCTTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGGAACTTAATGTACATTAGAAGCTTGGAAACACTTGCTTTGAT  500

seq1  ATCAAGGAAGAGGTAAGGCTCTCTTCTCAGGTGATTCTATGATTTCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGAAGAGGTAAGGCTCTCTTCTCAGGTGATTCTATGATTTCTATG  550

seq1  GATTTGAAAGAAAACTAAGTGTAATACAGGAAGTATTCTAATCTTTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAAAGAAAACTAAGTGTAATACAGGAAGTATTCTAATCTTTGGCT  600

seq1  CATAGATCTTTATATTTTACATGGCCAGAGACACATGGAGAAAATACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCTTTATATTTTACATGGCCAGAGACACATGGAGAAAATACAAA  650

seq1  TAAATCCATTTTTTCTACAATTAAAAGAGTTATTTAATTTTTTTCACACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCATTTTTTCTACAATTAAAAGAGTTATTTAATTTTTTTCACACC  700

seq1  AAGCATTTTGATTGAAATATTCTCCCAGGTTCTCCCCATCCTCCCACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTTGATTGAAATATTCTCCCAGGTTCTCCCCATCCTCCCACTGA  750

seq1  CATATCTTCATATAATTGCTCACTGTGTCCCTGTCTCCCTCTGTTCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTCATATAATTGCTCACTGTGTCCCTGTCTCCCTCTGTTCTCTG  800

seq1  TGTCTCTGTCTGTCTCTGTCTATGTCTCTGTCTCTCTCTGTCTCTCTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTCTGTCTCTGTCTATGTCTCTGTCTCTCTCTGTCTCTCTGTC  850

seq1  TCTCTCTTTCTCTCTCTCTCTCTAACAAAATGGAAAAACAAAACTGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTTCTCTCTCTCTCTCTAACAAAATGGAAAAACAAAACTGACAA  900

seq1  TAG-TATCAGT-AAGGCAAA-TATTATCCCAACTGGAAAAAAA-TAATTG  946
      ||| ||||||| |||||||| | |||||||||||||||||||| ||||||
seq2  TAGTTATCAGTAAAGGCAAATTTTTATCCCAACTGGAAAAAAATTAATTG  950

seq1  GGGAAAATTTAACAACAACAACCAAGAAC-TTGAACAGTTTTGCACTGGT  995
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGAAAATTTAACAACAACAACCAAGAACTTTGAACAGTTTTGCACTGGT  1000

seq1  CAACTATTCCTGGGCA-TAAAGCCTCCCCTGGTATTT-AGGCGC-TATAC  1042
      |||||||| || |||| ||||||||||||| |||||| || ||| |||||
seq2  CAACTATTTCTTGGCATTAAAGCCTCCCCTTGTATTTAAGCCGCTTATAC  1050

seq1  CCAATGAC-TCTACACTGTAGAAAAATG-ATTCTCCCTTTTCAAGTATGT  1090
      |||||||| ||||||||||||||||||| ||||| || ||||||||||  
seq2  CCAATGACTTCTACACTGTAGAAAAATGAATTCTTCCCTTTCAAGTATTA  1100

seq1  ATCACTTGCACACAG  1105
       ||||||||||||||
seq2  TTCACTTGCACACAG  1115