BAC Information

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BAC

Clone NameB6Ng01-012J11
Chromosome8 (Build37)
Map Location 114,607,384 - 114,608,393
singlet/doubletsinglet
Overlap genenone
Upstream gene4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498
Downstream geneLOC100042040, Cntnap4, LOC100042061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012J11.bB6Ng01-012J11.g
ACCDH847643DH847644
length1,021580
definitionDH847643|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J11, 5' end.DH847644|Mus musculus domesticus DNA, BAC clone: B6Ng01-012J11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagtgaaggcaccatagtgagacctagtcccaaaaaagt
aaaataaaataagagaagaaggggctgggggtaaagattgattctttcca
atatgagagagagagagagagagagagagagagagagagagagagagaga
gagagagagagagagaaatcctagaagcaaaaatgccagaagaggtttga
taatttaactttatatggccattttctgtgagtataaaaacatgtaactt
agcaggatctagtaagtagctgctttaaattaaattatttgtgaaaatta
agatgagctctggttttttaaaatcaaagggaattcactgtggcaaatga
gatatggggaaaaataaatgaacattactcagaacatacttaatgtgccc
gagttcctgggctacctgcttgtgacgggaggagggagcgatgtcagcct
aaatgagaacagcaaattgtgtgctaataggtttgcatatgatgatagag
aaactgtaatacagattttcttttgaattttccaatttgtactattttcc
tctaataacttctgcttcaatgattgtatattgatcttcaccacatggtt
ttttttcctaaatgctctatttgtacatcggtgggggttgaggggaggac
actctgtgaagactaatccgaattctcatcaaactacctcccttctgttg
tccaaaataactcccggggtttttttttttttttttgctatgaatattca
ggatttggcttgcttctccttcatatttgatctttatttctgccttgagt
catttcacagttaattaatttctctaccttcaaaataaggaggacaaaat
aatgagggccatttctagtggtgtgggaagggaaaacagaatgagactgg
tgtttcagaatcaatatggatattcggaccttcccagcctccccacgtta
ccttcgacctctcctggacggtgtgagagaaccattgacctgatcaagac
cactacacatgcctggaccaa
gaattccacgatagctagggctgtatagaaagattttgttttaaatttac
aaaagagaacagagctgttcctgtctaaaagaacctcagggacaaaaatg
gagaagagactgagggaaaggaggtccagtgaccggcccaaattgggatc
cagctcaaagggaggctccaaggcctgacactattactgatgctatggtg
tgcttacagacaggagcctagcatggctgccctctgagaggcccaacaag
cagctgaacaagtcagacagatatttacacccaaccaatggatagaagcc
agggacccctgtgattgaattaggggaaggctggaagaagctgaggagga
gggcgaccccataggaagaccagcaaccacaactaacctggacaccagag
atctcagacactgaaccactaaccaggcagcatacaccagctggtatgag
gcccccaacacatagacagacagcggaggactgccaggtctgacgtcagt
gagagaagatgcatctaaccctcaagagacttgaggccccagggagtggg
gaggcctggtgagttggggggtggggacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114607384_114608393
seq2: B6Ng01-012J11.b_44_1064 (reverse)

seq1  TTGGT-CAGGCATGGTGTAGTGGGCTCTGATCAGGTCAAAGG-TCTCTCA  48
      ||||| ||||||| ||||||||| || |||||||||||| || |||||||
seq2  TTGGTCCAGGCAT-GTGTAGTGGTCT-TGATCAGGTCAATGGTTCTCTCA  48

seq1  CACCGT-CAGGAGA-GTCGAAGGTAACGTGGGGA-GCTGGGAAGGTCTGA  95
      |||||| ||||||| ||||||||||||||||||| |||||||||||| ||
seq2  CACCGTCCAGGAGAGGTCGAAGGTAACGTGGGGAGGCTGGGAAGGTCCGA  98

seq1  ATAT-CATTATGATTCTG-AACACCAGTCTCATTCTGTTTTCCCTT-CCA  142
      |||| |||  |||||||| ||||||||||||||||||||||||||| |||
seq2  ATATCCATATTGATTCTGAAACACCAGTCTCATTCTGTTTTCCCTTCCCA  148

seq1  CACCACTAG-AATGGCCCTCATTATTTTGT-CTTCTTATTTAGAAGGTAG  190
      ||||||||| |||||||||||||||||||| || ||||||| ||||||||
seq2  CACCACTAGAAATGGCCCTCATTATTTTGTCCTCCTTATTTTGAAGGTAG  198

seq1  AGAAATTAATTAACTGTGAAATGACTCAAGGCAGAAATAAAGATCAAATA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAATTAACTGTGAAATGACTCAAGGCAGAAATAAAGATCAAATA  248

seq1  TGAAGGAGAAGCAAGCCAAATCCTGAATATTCATAGCAAAAAAAAAAAAA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGAAGCAAGCCAAATCCTGAATATTCATAGCAAAAAAAAAAAAA  298

seq1  AAAA-CCCGGGAGTTATTTTGGACAACAGAAGGGAGGTAGTTTGATGAGA  339
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCCGGGAGTTATTTTGGACAACAGAAGGGAGGTAGTTTGATGAGA  348

seq1  ATTCGGATTAGTCTTCACAGAGTGTCCTCCCCTCAACCCCCACCGATGTA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGATTAGTCTTCACAGAGTGTCCTCCCCTCAACCCCCACCGATGTA  398

seq1  CAAATAGAGCATTTAGGAAAAAAAACCATGTGGTGAAGATCAATATACAA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGAGCATTTAGGAAAAAAAACCATGTGGTGAAGATCAATATACAA  448

seq1  TCATTGAAGCAGAAGTTATTAGAGGAAAATAGTACAAATTGGAAAATTCA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAGCAGAAGTTATTAGAGGAAAATAGTACAAATTGGAAAATTCA  498

seq1  AAAGAAAATCTGTATTACAGTTTCTCTATCATCATATGCAAACCTATTAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATCTGTATTACAGTTTCTCTATCATCATATGCAAACCTATTAG  548

seq1  CACACAATTTGCTGTTCTCATTTAGGCTGACATCGCTCCCTCCTCCCGTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATTTGCTGTTCTCATTTAGGCTGACATCGCTCCCTCCTCCCGTC  598

seq1  ACAAGCAGGTAGCCCAGGAACTCGGGCACATTAAGTATGTTCTGAGTAAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGGTAGCCCAGGAACTCGGGCACATTAAGTATGTTCTGAGTAAT  648

seq1  GTTCATTTATTTTTCCCCATATCTCATTTGCCACAGTGAATTCCCTTTGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTATTTTTCCCCATATCTCATTTGCCACAGTGAATTCCCTTTGA  698

seq1  TTTTAAAAAACCAGAGCTCATCTTAATTTTCACAAATAATTTAATTTAAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAACCAGAGCTCATCTTAATTTTCACAAATAATTTAATTTAAA  748

seq1  GCAGCTACTTACTAGATCCTGCTAAGTTACATGTTTTTATACTCACAGAA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTACTTACTAGATCCTGCTAAGTTACATGTTTTTATACTCACAGAA  798

seq1  AATGGCCATATAAAGTTAAATTATCAAACCTCTTCTGGCATTTTTGCTTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCATATAAAGTTAAATTATCAAACCTCTTCTGGCATTTTTGCTTC  848

seq1  TAGGATT--TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  887
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  898

seq1  CTCTCTCTCTCTCTCTCTCATATTGGAAAGAATCAATCTTTACCCCCAGC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCATATTGGAAAGAATCAATCTTTACCCCCAGC  948

seq1  CCCTTCTTCTCTTATTTTATTTTACTTTTTTGGGACTAGGTCTCACTATG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTCTCTTATTTTATTTTACTTTTTTGGGACTAGGTCTCACTATG  998

seq1  GTGCCTTCACTGTCCTGGAATTC  1010
      |||||||||||||||||||||||
seq2  GTGCCTTCACTGTCCTGGAATTC  1021