BAC Information

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BAC

Clone NameB6Ng01-013C16
Chromosome8 (Build37)
Map Location 26,149,838 - 26,150,769
singlet/doubletsinglet
Overlap genenone
Upstream geneZmat4, 1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4
Downstream genePlekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013C16.bB6Ng01-013C16.g
ACCDH848054DH848055
length1,216925
definitionDH848054|Mus musculus domesticus DNA, BAC clone: B6Ng01-013C16, 5' end.DH848055|Mus musculus domesticus DNA, BAC clone: B6Ng01-013C16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaagacctaatgtcgatgctcttcaaact
attccacaaaacagaaacagagtgaacactgcccaattcattctctgaag
ccacacttaccctgatgcctaaaccacacaaagacccaacaaaggaagag
aacttcagaccaatttcccttatgaatatcaatgcaaaaatactcaataa
aattcttgccaaccaaatccaagaacacataaaaactatcattcaccaca
atcaagtaggcttcatcccagggatgcagggatggttcaatatatggaaa
tccatcaacgtaatccactacataaataaactcagagaaaaaaaaaagca
cacatgatcatttcattagatgttgaaaacacatttgacaaaattcaaca
tcccttcatgttaaacgtcttgaaaacatcaggaattcaagacccatgcc
taaacataataaaagcattatacagaaaaccagtagccaacatcaaacca
aatggagagaaacttaaagcaatcccactaaaatcaaggactagacaagg
ctgtccactctctccctacctattcaatatagtacttgaagttctcgcca
gagcaattagacaacaaaagggggtcaaaggggtacaaattggaaaaaaa
gtcaaactatcactgtttgcagatgatatgatagtatacttcagtggccc
ccaaaactccaccagagaactcctacagctgataaacaacttcaacaaag
tggcccggatataaaattaactcaaacaaatcagtagccttcctatactc
aaagaataaacaggccgagaaagaaattagggaaacgacagccttcacaa
taatataaagtatcttggtgtgactctaaccaaacaagtgaaagatctgt
atgacaagaacttcaagtctctgaagaaggagattgaagaagatctcaga
agatggaaagatttcctatgcagatatagtaaaatggccatctgctgaaa
gcatctacagattcatgcatacccatcaattcaactcaatctcaataagg
tagaaaagcagtatcaaatcatctggaataacaaaaagctcaggtatgaa
aactattctcacataaagaacttctgttgaatcaccatccctgaacttaa
gcgtactacgagacatgtggctctaaaaagtgcctaatttggtacagtga
cacggcgacaggctga
gaattccccttctgtctgtatttacacacatacacacaccctttaaattt
gttttttgctagagtcttgctacggagtccaggctggctttgaactgata
atcctcctgcctcagcctcctgagtgcttggattacaagtctatgccacc
atatccagcctaggacagtattttaatgtgagccaaagatggtgcataaa
cctttagttttcaaggtgtgatggcgtgtgggtttgtggttaagcataga
ttgtggataaatccgaagggatttctggattataaaagatactgcatttc
ctgtgtggaataaaagcagtctctggggttgggtccttctataaagcttc
gaaggtattgttctctgtagctgaagtatgtcctatccattactcttcaa
tgctttggtggacttgcttactcgggtcaggtgataatcaggggaaaaaa
aaaaaaaagaagcgtgtgtttttcattctccgaaccacaccgaggatatg
ggagaccgcaaactaaagtggcacctctggtcaaagtggcggagtgacag
ctctacttccaagtagaaggctgcccctccgggaagatttaaggtccatc
gtcctagtttactggaagcaaactggtttggtttggttttcccctttcta
cacaggacttatatgaccctctgagtaagcagtggactggtaattgagcg
gtagacttgatacttgttttcagtgtcaaccaaataaacagctatctggt
tagcagacggcagtgtttttgaaattaggcttcccaatgtcgcctggttt
taccttctcccccacccccacccccaaaatctgtttcctcagtccctcgt
cctctctgtgtatgcctgcctgagcattaagtcacttataccaggaaggc
gtgaatcaaggtaaatattggcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26149838_26150769
seq2: B6Ng01-013C16.g_67_991 (reverse)

seq1  TTTGCCAAATATTCA-CTTGATTCAACGCCTACCTGGTATAAGTGACTAT  49
      | |||| |||||| | |||||||| |||||| |||||||||||||||| |
seq2  TGTGCC-AATATTTACCTTGATTC-ACGCCTTCCTGGTATAAGTGACT-T  47

seq1  AATTGACTCAGGCAGGCAATAACACAGAGAGAGAACGAGGGACTGAGGAA  99
      |||   |||||||||||    | ||| |||||| |||||||||||||| |
seq2  AAT--GCTCAGGCAGGC----ATACACAGAGAGGACGAGGGACTGAGG-A  90

seq1  AACAGATTTTGGGGGGTGGGGGTGGGGGAGGAGGTTAAA-CAGGCGACA-  147
      |||||||||| ||||||||||||||||||| |||| ||| ||||||||| 
seq2  AACAGATTTT-GGGGGTGGGGGTGGGGGAGAAGGTAAAACCAGGCGACAT  139

seq1  TGGGAAGCCTAATTTCAAAAACACTGCCGTCTGCT-ACCAGATAGCTGTT  196
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGGAAGCCTAATTTCAAAAACACTGCCGTCTGCTAACCAGATAGCTGTT  189

seq1  TATTTGGTTGACACTGAAAACAAGTATCAAGTCTACCGCTCAATTACCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTTGACACTGAAAACAAGTATCAAGTCTACCGCTCAATTACCAG  239

seq1  TCCACTGCTTACTCAGAGGGTCATATAAGTCCTGTGTAGAAAGGGGAAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCTTACTCAGAGGGTCATATAAGTCCTGTGTAGAAAGGGGAAAA  289

seq1  CCAAACCAAACCAGTTTGCTTCCAGTAAACTAGGACGATGGACCTTAAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAACCAGTTTGCTTCCAGTAAACTAGGACGATGGACCTTAAAT  339

seq1  CTTCCCGGAGGGGCAGCCTTCTACTTGGAAGTAGAGCTGTCACTCCGCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCGGAGGGGCAGCCTTCTACTTGGAAGTAGAGCTGTCACTCCGCCA  389

seq1  CTTTGACCAGAGGTGCCACTTTAGTTTGCGGTCTCCCATATCCTCGGTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCAGAGGTGCCACTTTAGTTTGCGGTCTCCCATATCCTCGGTGT  439

seq1  GGTTCGGAGAATGAAAAACACACGCTTCTTTTTTTTTTTTTTCCCCTGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCGGAGAATGAAAAACACACGCTTCTTTTTTTTTTTTTTCCCCTGAT  489

seq1  TATCACCTGACCCGAGTAAGCAAGTCCACCAAAGCATTGAAGAGTAATGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCTGACCCGAGTAAGCAAGTCCACCAAAGCATTGAAGAGTAATGG  539

seq1  ATAGGACATACTTCAGCTACAGAGAACAATACCTTCGAAGCTTTATAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACATACTTCAGCTACAGAGAACAATACCTTCGAAGCTTTATAGAA  589

seq1  GGACCCAACCCCAGAGACTGCTTTTATTCCACACAGGAAATGCAGTATCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAACCCCAGAGACTGCTTTTATTCCACACAGGAAATGCAGTATCT  639

seq1  TTTATAATCCAGAAATCCCTTCGGATTTATCCACAATCTATGCTTAACCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATCCAGAAATCCCTTCGGATTTATCCACAATCTATGCTTAACCA  689

seq1  CAAACCCACACGCCATCACACCTTGAAAACTAAAGGTTTATGCACCATCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCACACGCCATCACACCTTGAAAACTAAAGGTTTATGCACCATCT  739

seq1  TTGGCTCACATTAAAATACTGTCCTAGGCTGGATATGGTGGCATAGACTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCACATTAAAATACTGTCCTAGGCTGGATATGGTGGCATAGACTT  789

seq1  GTAATCCAAGCACTCAGGAGGCTGAGGCAGGAGGATTATCAGTTCAAAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCAAGCACTCAGGAGGCTGAGGCAGGAGGATTATCAGTTCAAAGC  839

seq1  CAGCCTGGACTCCGTAGCAAGACTCTAGCAAAAAACAAATTTAAAGGGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGACTCCGTAGCAAGACTCTAGCAAAAAACAAATTTAAAGGGTG  889

seq1  TGTGTATGTGTGTAAATACAGACAGAAGGGGAATTC  932
      ||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTGTAAATACAGACAGAAGGGGAATTC  925