BAC Information

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BAC

Clone NameB6Ng01-013N06
Chromosome8 (Build37)
Map Location 13,916,018 - 14,046,778
singlet/doubletdoublet
Overlap geneFbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1
Upstream geneMcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536
Downstream geneDlgap2, LOC100041140, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013N06.bB6Ng01-013N06.g
ACCDH848543DH848544
length820844
definitionDH848543|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N06, 5' end.DH848544|Mus musculus domesticus DNA, BAC clone: B6Ng01-013N06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,916,018 - 13,916,838)(14,045,936 - 14,046,778)
sequence
gaattcaggacctctgggaaagcagtcagagctcttaactgctgagccat
ctctccagccctccctcctcttcctcctccttttttttttttctaaaaaa
aagctggataagggacattcatcttagtcatatgaccaaaggttataaaa
atagggagtgtttgctctaaattgtagttaactgatagtttatatacatg
aaaaaactgaaaggtttgtacaatataaataattttattaacatttatac
acattaaattttaatcctggaagcattttttcttcacttttagattttca
taaacctggctataaaaaaaatcaccaaaaagtgtgaccttcctacctca
aaatgcattataaaaatagcagctggttaataatttcctcagtgtaggca
ttgttctttatcctgacctctgggtctcctgtggctccattcccaagtcc
tctgattcccatccaacaccaggcagaagcactcagcagtggccattgtg
ccagcaacgtcagtggcgtgggagctgccacagccaggtggtgtggggcc
tgcagccaggtgtgggtctgccgcagccaggtgtgggggctgcagccagg
tgttgtgggaccgcagccaggtgtgggtctgccgcagccaggtgtggggg
ctgccacacccaggtgtgggtctgccgcagccaggtgtaggggctgcagc
caggtggtgtggggctacagccaggtgtgggggctgccacagccaggtgt
gggtctgccgcagccaggtgtgggggctgcagccagttgttgtggggccc
ctccaggtgtaggggctgcc
gaattcctgcctgtttcataggatccttgacatagttaccatggagtcga
ccctccattttagctatcaaataaagcagcgattttttttccgatttcca
taagatttttatcaaataggctcttaatctgttttctgcttctataagga
atgctagaggctgtgtaatttataatgaacagctttgtgtttgcctcatg
tatctggaacctagaaactctcaagatcaaagggccacatttgatgaaga
catttgtgttcaatcaacggtggtagaatgctggacaagatggccaggag
tgggaagagtcaggctcatccttccaggagtgggaggagtcagagttcca
tccttcccagtgtagaaggtgtaggaagagctcatctttccaggagtggg
aagaggccgggatcatacttttagtcagagcctgctccactgatgaagac
agaatccattcacaaaggtggaattctcctggcctgacctcttcccaaag
gccctgcctctttgcattgtcctggtaagggttaagtctcaacacaaaaa
ctttggggatacattcacaccacttggagtatcttatatttataagccta
tttctttttttctaagttttgctctaacgttttactagaaaattttatgg
atggtgtttatatgtttttgtaatgacatatgaaggctataatgatgctg
ttatagtaattttatattttgcaccaatacacaagaactaagcaggcaca
gcgggtacctacctgtaattcccagcagcacccagaagagaaagtggaga
ggatctcaagtccaagactccacagagttgcttagtacacactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13916018_13916838
seq2: B6Ng01-013N06.b_47_866

seq1  GAATTCAGGACCTCTGGGAAAGCAGTCAGAGCTCTTAACTGCTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTGGGAAAGCAGTCAGAGCTCTTAACTGCTGAGCCAT  50

seq1  CTCTCCAGCCCTCCCTCCTCTTCCTCCTCCTTTTTTTTTTTTCTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGCCCTCCCTCCTCTTCCTCCTCCTTTTTTTTTTTTCTAAAAAA  100

seq1  AAGCTGGATAAGGGACATTCATCTTAGTCATATGACCAAAGGTTATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGATAAGGGACATTCATCTTAGTCATATGACCAAAGGTTATAAAA  150

seq1  ATAGGGAGTGTTTGCTCTAAATTGTAGTTAACTGATAGTTTATATACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAGTGTTTGCTCTAAATTGTAGTTAACTGATAGTTTATATACATG  200

seq1  AAAAAACTGAAAGGTTTGTACAATATAAATAATTTTATTAACATTTATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGAAAGGTTTGTACAATATAAATAATTTTATTAACATTTATAC  250

seq1  ACATTAAATTTTAATCCTGGAAGCATTTTTTCTTCACTTTTAGATTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAATTTTAATCCTGGAAGCATTTTTTCTTCACTTTTAGATTTTCA  300

seq1  TAAACCTGGCTATAAAAAAAATCACCAAAAAGTGTGACCTTCCTACCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGGCTATAAAAAAAATCACCAAAAAGTGTGACCTTCCTACCTCA  350

seq1  AAATGCATTATAAAAATAGCAGCTGGTTAATAATTTCCTCAGTGTAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATTATAAAAATAGCAGCTGGTTAATAATTTCCTCAGTGTAGGCA  400

seq1  TTGTTCTTTATCCTGACCTCTGGGTCTCCTGTGGCTCCATTCCCAAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTATCCTGACCTCTGGGTCTCCTGTGGCTCCATTCCCAAGTCC  450

seq1  TCTGATTCCCATCCAACACCAGGCAGAAGCACTCAGCAGTGGCCATTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCCCATCCAACACCAGGCAGAAGCACTCAGCAGTGGCCATTGTG  500

seq1  CCAGCAACGTCAGTGGTGTGGGAGCTGCCACAGCCAGGTGGTGTGGGGCC  550
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAGCAACGTCAGTGGCGTGGGAGCTGCCACAGCCAGGTGGTGTGGGGCC  550

seq1  TGCAGCCAGGTGTGGGTCTGCCGCAGCCAGGTGTGGGGGCTGCAGCCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCAGGTGTGGGTCTGCCGCAGCCAGGTGTGGGGGCTGCAGCCAGG  600

seq1  TGTTGTGGGACCGCAGCCAGGTGTGGGTCTGCCGCAGCCAGGTGTGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGGACCGCAGCCAGGTGTGGGTCTGCCGCAGCCAGGTGTGGGGG  650

seq1  CTGCCACAGCCAGGTGTGGGTCTGCCGCAGCCAGGTGTAGGGGCTGCAGC  700
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACACCCAGGTGTGGGTCTGCCGCAGCCAGGTGTAGGGGCTGCAGC  700

seq1  CAGGTGGTGTGGGGCTACAGCCAGGTGTGGGGGCTGCCACAGCCAGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGTGTGGGGCTACAGCCAGGTGTGGGGGCTGCCACAGCCAGGTGT  750

seq1  GGGTCTGCCGCAGCCAGGTGTGGGGGCTGCAGCCAGGTGGTGTGGGGCCG  800
      |||||||||||||||||||||||||||||||||||| || ||||||||| 
seq2  GGGTCTGCCGCAGCCAGGTGTGGGGGCTGCAGCCAGTTGTTGTGGGGCC-  799

seq1  CAGCCAGGTGTAGGGGCTGCC  821
      |  ||||||||||||||||||
seq2  CCTCCAGGTGTAGGGGCTGCC  820

seq1: chr8_14045936_14046778
seq2: B6Ng01-013N06.g_66_909 (reverse)

seq1  CAGTGTGTACTATGCAACTCTGTGGAGTCTTGAACTTGAGATCCTCTCCA  50
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  CAGTGTGTACTAAGCAACTCTGTGGAGTCTTGGACTTGAGATCCTCTCCA  50

seq1  CTTTCTCTTCTGGGTGCTGCTGGG-ATTACAGGTAGGTA-CCGCTGTGCC  98
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  CTTTCTCTTCTGGGTGCTGCTGGGAATTACAGGTAGGTACCCGCTGTGCC  100

seq1  TGCTTAGTTCTTGTGTATTGGTGCAAAATATAAAATTACTATAACAGCAA  148
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGCTTAGTTCTTGTGTATTGGTGCAAAATATAAAATTACTATAACAGC-A  149

seq1  TCATTATAGCCTTCATATGTCATTACAAAAACATATAAACACCATCCATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAGCCTTCATATGTCATTACAAAAACATATAAACACCATCCATA  199

seq1  AAATTTTCTAGTAAAACGTTAGAGCAAAACTTAGAAAAAAAGAAATAGGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTAGTAAAACGTTAGAGCAAAACTTAGAAAAAAAGAAATAGGC  249

seq1  TTATAAATATAAGATACTCCAAGTGGTGTGAATGTATCCCCAAAGTTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATATAAGATACTCCAAGTGGTGTGAATGTATCCCCAAAGTTTTT  299

seq1  GTGTTGAGACTTAACCCTTACCAGGACAATGCAAAGAGGCAGGGCCTTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAGACTTAACCCTTACCAGGACAATGCAAAGAGGCAGGGCCTTTG  349

seq1  GGAAGAGGTCAGGCCAGGAGAATTCCACCTTTGTGAATGGATTCTGTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGTCAGGCCAGGAGAATTCCACCTTTGTGAATGGATTCTGTCTT  399

seq1  CATCAGTGGAGCAGGCTCTGACTAAAAGTATGATCCCGGCCTCTTCCCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGGAGCAGGCTCTGACTAAAAGTATGATCCCGGCCTCTTCCCAC  449

seq1  TCCTGGAAAGATGAGCTCTTCCTACACCTTCTACACTGGGAAGGATGGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAAGATGAGCTCTTCCTACACCTTCTACACTGGGAAGGATGGAA  499

seq1  CTCTGACTCCTCCCACTCCTGGAAGGATGAGCCTGACTCTTCCCACTCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTCCTCCCACTCCTGGAAGGATGAGCCTGACTCTTCCCACTCCT  549

seq1  GGCCATCTTGTCCAGCATTCTACCACCGTTGATTGAACACAAATGTCTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCTTGTCCAGCATTCTACCACCGTTGATTGAACACAAATGTCTTC  599

seq1  ATCAAATGTGGCCCTTTGATCTTGAGAGTTTCTAGGTTCCAGATACATGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGTGGCCCTTTGATCTTGAGAGTTTCTAGGTTCCAGATACATGA  649

seq1  GGCAAACACAAAGCTGTTCATTATAAATTACACAGCCTCTAGCATTCCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACACAAAGCTGTTCATTATAAATTACACAGCCTCTAGCATTCCTT  699

seq1  ATAGAAGCAGAAAACAGATTAAGAGCCTATTTGATAAAAATCTTATGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCAGAAAACAGATTAAGAGCCTATTTGATAAAAATCTTATGGAA  749

seq1  ATCGGAAAAAAAATCGCTGCTTTATTTGATAGCTAAAATGGAGGGTCGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGAAAAAAAATCGCTGCTTTATTTGATAGCTAAAATGGAGGGTCGAC  799

seq1  TCCATGGTAACTATGTCAAGGATCCTATGAAACAGGCAGGAATTC  843
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGTAACTATGTCAAGGATCCTATGAAACAGGCAGGAATTC  844