BAC Information

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BAC

Clone NameB6Ng01-014A04
Chromosome8 (Build37)
Map Location 75,615,523 - 75,768,052
singlet/doubletdoublet
Overlap geneLarge
Upstream geneOlfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
Downstream geneLOC100039001, LOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014A04.bB6Ng01-014A04.g
ACCDH848676DH848677
length1,121910
definitionDH848676|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A04, 5' end.DH848677|Mus musculus domesticus DNA, BAC clone: B6Ng01-014A04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,615,523 - 75,616,669)(75,767,138 - 75,768,052)
sequence
gaattccactttccaacctctgtaatgtgggtaaagaacaggcatcaatg
ctatgagcaaaggagattaaattgggactccccactaaagagacaaatca
taaaacagccactgctctagccacttccctttatgagctcagggtcatct
ttatcccagtggtagccaggtgggcaagataaaaggctagtagacatgga
ggaacttgtctaaaagctggcaagtactgttttgctgatttaaagcaaac
tacagtaatgatcatttatatttgaacaaggtccctgggtgagatttctg
ggtcattgcaaacctcagcaacctcactagagtgggtcacttttatccct
agcagaaagttctattcccagcaagccattaaatggaggcttcatgctta
attcatttgtttttcaggggcagtcagaaaaaggaccatattgagagctt
gggggactcttgtttaactagaaatacagataatatacaagaaagggaaa
gaacaaaggacaagaatcagacacaatggagttgggttttgagccatgat
tacaggtagcttcaggattaagctaagaattacagttaattgtccatata
gtggggatactgaactgacatcatagaattgtgggaatgcagaggcgaag
cagggatatcattagaaacaatatactcactctaaaggcaatagatgtta
tatgtagcccatgagcctaggggtcccaacagtcaggggatcaagtacac
taggacaagggcatcctcattttctggtgactacagccctttccttcaga
tccaaactccatttgtgcttagtgaattgcacatcctgtcttatatcatc
tcatttcaaagagaaagtcaaatatcagccttggcatttattaactgcct
gatcttaggcaaatattctgcagtactgggttgcagatttatgattatct
gtgagatggagggatcaaactttactctcagcccagagcgttgtcatgag
agtgagtgacagtgtcagacatctataagctctgtacaaagtaaataccc
ctctctctgatgtcaagctacagtttcagcgaggtcagccagaagtactg
cctgtgggattgagggtagaa
gaattctgtctctgtgtcaccagtactttctcttctgtttctttattttg
ctgacttacattggtagctcttcatatgtaatttacaagcagaatcaccc
ctgtttgctagttagttgatctcctgttattggttctcactgcatggatt
atatacctttgtttccttccagtagtgcctgggttatgtggctccaaaag
tgtttctggaatgagaagactcaggtgatgggaggctctcccatgggtgc
ttagtgcatgacatcttgtgggcagacgtgccccactctgtgagattaca
ggggcttctctgctgtatcacttgtttctggggacattctgcaaggggct
gggcatatcactgtttctccgcccaggcaggctttcagtagtgttctaga
aaaaaagaagacctcatcaatctggaggaatgataattgattaaagaggt
ttccagtccacctatgcaaaccatttggaattcactgttcttcatcccaa
gggtcatggaggttgctgtttttaattgagtcacatggtgttaggtggga
tgtatgattcctgttgtcacagagtgctttcgactttactgtggtgacta
tgggtctcacctcagtttgttgtgttcccatggttgcctccatgaaggac
ttgtgaatatcctagggtctgcatttgtagcatatcattgaacccattga
aactgtgtaaagcttgttcagtgtgcaaggataatgaatgattatgccat
ttccttcagttaagaccttagaaaaaattgtgtaaagctcccacatcctg
tgatgtagcagcaagttagtatgaggcatatctgcatgaaggtggggata
cagaccatgtcagagaatgcaggaagatgagaatgtatctttgatatcat
tcgttgactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75615523_75616669
seq2: B6Ng01-014A04.b_46_1166

seq1  GAATTCCACTTTCCAACCTCTGTAATGTGGGTAAAGAACAGGCATCAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTTCCAACCTCTGTAATGTGGGTAAAGAACAGGCATCAATG  50

seq1  CTATGAGCAAAGGAGATTAAATTGGGACTCCCCACTAAAGAGACAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGCAAAGGAGATTAAATTGGGACTCCCCACTAAAGAGACAAATCA  100

seq1  TAAAACAGCCACTGCTCTAGCCACTTCCCTTTATGAGCTCAGGGTCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGCCACTGCTCTAGCCACTTCCCTTTATGAGCTCAGGGTCATCT  150

seq1  TTATCCCAGTGGTAGCCAGGTGGGCAAGATAAAAGGCTAGTAGACATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCAGTGGTAGCCAGGTGGGCAAGATAAAAGGCTAGTAGACATGGA  200

seq1  GGAACTTGTCTAAAAGCTGGCAAGTACTGTTTTGCTGATTTAAAGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTGTCTAAAAGCTGGCAAGTACTGTTTTGCTGATTTAAAGCAAAC  250

seq1  TACAGTAATGATCATTTATATTTGAACAAGGTCCCTGGGTGAGATTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAATGATCATTTATATTTGAACAAGGTCCCTGGGTGAGATTTCTG  300

seq1  GGTCATTGCAAACCTCAGCAACCTCACTAGAGTGGGTCACTTTTATCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTGCAAACCTCAGCAACCTCACTAGAGTGGGTCACTTTTATCCCT  350

seq1  AGCAGAAAGTTCTATTCCCAGCAAGCCATTAAATGGAGGCTTCATGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGTTCTATTCCCAGCAAGCCATTAAATGGAGGCTTCATGCTTA  400

seq1  ATTCATTTGTTTTTCAGGGGCAGTCAGAAAAAGGACCATATTGAGAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGTTTTTCAGGGGCAGTCAGAAAAAGGACCATATTGAGAGCTT  450

seq1  GGGGGACTCTTGTTTAACTAGAAATACAGATAATATACAAGAAAGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACTCTTGTTTAACTAGAAATACAGATAATATACAAGAAAGGGAAA  500

seq1  GAACAAAGGACAAGAATCAGACACAATGGAGTTGGGTTTTGAGCCATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGGACAAGAATCAGACACAATGGAGTTGGGTTTTGAGCCATGAT  550

seq1  TACAGGTAGCTTCAGGATTAAGCTAAGAATTACAGTTAATTGTCCATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTAGCTTCAGGATTAAGCTAAGAATTACAGTTAATTGTCCATATA  600

seq1  GTGGGGATACTGAACTGACATCATAGAATTGTGGGAATGCAGAGGCGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGATACTGAACTGACATCATAGAATTGTGGGAATGCAGAGGCGAAG  650

seq1  CAGGGATATCATTAGAAACAATATACTCACTCTAAAGGCAATAGATGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATATCATTAGAAACAATATACTCACTCTAAAGGCAATAGATGTTA  700

seq1  TATGTAGCCCATGAGCCTAGGGGTCCCAACAGTCAGGGGATCAAGTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGCCCATGAGCCTAGGGGTCCCAACAGTCAGGGGATCAAGTACAC  750

seq1  TAGGACAAGGGCATCCTCATTTTCTGGTGACTACAGCCCTTTCCTTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAAGGGCATCCTCATTTTCTGGTGACTACAGCCCTTTCCTTCAGA  800

seq1  TCCAAACTCCATTTGTGCTTAGTGAATTGCACATCCTGTCTTATATCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTCCATTTGTGCTTAGTGAATTGCACATCCTGTCTTATATCATC  850

seq1  TCATTTCAAAAGAGAAAAGTCAAATATCAGCCTTGGCATTTATTAACTGC  900
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TCATTTC-AAAGAG-AAAGTCAAATATCAGCCTTGGCATTTATTAACTGC  898

seq1  CTGATCTTAGGCAAATATTCTGCAGTACTGGGTTGCAGATTTATGAATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGATCTTAGGCAAATATTCTGCAGTACTGGGTTGCAGATTTATG-ATTA  947

seq1  TCTGTGAGATGGAGGGAATCAAACTTTACTCTCAAGCCCAGAGCGTTGTC  1000
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TCTGTGAGATGGAGGG-ATCAAACTTTACTCTC-AGCCCAGAGCGTTGTC  995

seq1  ATGAGAAGTGAGTGACAGTGTCCAGACATCTATAAAGCTCTGTACCAAAG  1050
      ||||| ||||||||||||||| ||||||||||| |||||||||| |||||
seq2  ATGAG-AGTGAGTGACAGTGT-CAGACATCTAT-AAGCTCTGTA-CAAAG  1041

seq1  TAAATACCCCTTCTCTCTGGATGTTCAGAGCTACGAGTTTTCAGCAGAGG  1100
      |||||||||| ||||||| |||| ||| |||||| || ||||||| ||||
seq2  TAAATACCCC-TCTCTCT-GATG-TCA-AGCTAC-AG-TTTCAGC-GAGG  1084

seq1  TCAGGGCACAGAAAGTACTGTCCTGATAGGGATTTTGGAGGGTAGAA  1147
      ||||    ||| |||||||| ||||   ||||||   ||||||||||
seq2  TCAG---CCAG-AAGTACTG-CCTG--TGGGATT---GAGGGTAGAA  1121

seq1: chr8_75767138_75768052
seq2: B6Ng01-014A04.g_67_976 (reverse)

seq1  CAGTCAACGAATGATAATCAAAAGATACCAATCTCCCTCCTTTCCTGCAT  50
      ||||||||||||||| ||| ||||||| || ||| | ||  |||||||||
seq2  CAGTCAACGAATGAT-ATC-AAAGATA-CATTCT-CATC--TTCCTGCAT  44

seq1  TCCTCTGACATGTGGCTCTGTATCCCCAACCTCATGCAGATATGCCTCAT  100
      | |||||||||   | |||||||||||| | |||||||||||||||||||
seq2  T-CTCTGACAT---GGTCTGTATCCCCACCTTCATGCAGATATGCCTCAT  90

seq1  ACTAAC-TGCTGCTACATCACAGGATGTGGGAGCTTCACACA--TTTTTC  147
      |||||| ||||||||||||||||||||||||||||| |||||  ||||||
seq2  ACTAACTTGCTGCTACATCACAGGATGTGGGAGCTTTACACAATTTTTTC  140

seq1  TAAGGTCTAACCTGAAGGAAATGGCATAATCATTCA-TATCCCTGCACAC  196
      |||||||| | ||||||||||||||||||||||||| ||||| |||||||
seq2  TAAGGTCTTAACTGAAGGAAATGGCATAATCATTCATTATCCTTGCACAC  190

seq1  TGAAC-AGCTTTACACAGTTTCAATGGG-TCCATGATATTGCTACAAATG  244
      ||||| |||||||||||||||||||||| || |||||| |||||||||||
seq2  TGAACAAGCTTTACACAGTTTCAATGGGTTCAATGATA-TGCTACAAATG  239

seq1  CAGACCCTAGGATATTCACAAGTCCTTCATGGAGGCAACCATGGGAACAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTAGGATATTCACAAGTCCTTCATGGAGGCAACCATGGGAACAC  289

seq1  AACAAACTGAGGTGAGACCCATAGTCACCACAGTAAAGTCGAAAGCACTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTGAGGTGAGACCCATAGTCACCACAGTAAAGTCGAAAGCACTC  339

seq1  TGTGACAACAGGAATCATACATCCCACCTAACACCATGTGACTCAATTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAACAGGAATCATACATCCCACCTAACACCATGTGACTCAATTAA  389

seq1  AAACAGCAACCTCCATGACCCTTGGGATGAAGAACAGTGAATTCCAAATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAACCTCCATGACCCTTGGGATGAAGAACAGTGAATTCCAAATG  439

seq1  GTTTGCATAGGTGGACTGGAAACCTCTTTAATCAATTATCATTCCTCCAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATAGGTGGACTGGAAACCTCTTTAATCAATTATCATTCCTCCAG  489

seq1  ATTGATGAGGTCTTCTTTTTTTCTAGAACACTACTGAAAGCCTGCCTGGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGAGGTCTTCTTTTTTTCTAGAACACTACTGAAAGCCTGCCTGGG  539

seq1  CGGAGAAACAGTGATATGCCCAGCCCCTTGCAGAATGTCCCCAGAAACAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAAACAGTGATATGCCCAGCCCCTTGCAGAATGTCCCCAGAAACAA  589

seq1  GTGATACAGCAGAGAAGCCCCTGTAATCTCACAGAGTGGGGCACGTCTGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATACAGCAGAGAAGCCCCTGTAATCTCACAGAGTGGGGCACGTCTGC  639

seq1  CCACAAGATGTCATGCACTAAGCACCCATGGGAGAGCCTCCCATCACCTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGATGTCATGCACTAAGCACCCATGGGAGAGCCTCCCATCACCTG  689

seq1  AGTCTTCTCATTCCAGAAACACTTTTGGAGCCACATAACCCAGGCACTAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTCATTCCAGAAACACTTTTGGAGCCACATAACCCAGGCACTAC  739

seq1  TGGAAGGAAACAAAGGTATATAATCCATGCAGTGAGAACCAATAACAGGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAAACAAAGGTATATAATCCATGCAGTGAGAACCAATAACAGGA  789

seq1  GATCAACTAACTAGCAAACAGGGGTGATTCTGCTTGTAAATTACATATGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACTAACTAGCAAACAGGGGTGATTCTGCTTGTAAATTACATATGA  839

seq1  AGAGCTACCAATGTAAGTCAGCAAAATAAAGAAACAGAAGAGAAAGTACT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTACCAATGTAAGTCAGCAAAATAAAGAAACAGAAGAGAAAGTACT  889

seq1  GGTGACACAGAGACAGAATTC  915
      |||||||||||||||||||||
seq2  GGTGACACAGAGACAGAATTC  910