BAC Information

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BAC

Clone NameB6Ng01-014C04
Chromosome8 (Build37)
Map Location 10,348,721 - 10,493,316
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C04.bB6Ng01-014C04.g
ACCDH848765DH848766
length1,1241,115
definitionDH848765|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C04, 5' end.DH848766|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,348,721 - 10,349,848)(10,492,190 - 10,493,316)
sequence
gaattccagtggctcaggatgactcttgtgggcttcagttgggatagaaa
gtacagaggagttggggaaagtgggaatgtttgatctctgtgtggctgga
atgaaaccagagcggtcatggagtgaaggcatggaatagttcacgaagca
ggcacactcaagtctgaatcaaatgccataggcacccaaatgacgctaaa
gtgcagatacagcattcaatccaggggtggcagcctcttgtctgaagaca
aagagtggagtgcaagactatgacttacaaggttggtgaaccgaatactt
cagtgtgtgaaaacaagagtcgttggtggctttttcatgggagtgtgatg
ggatttagttactgtctaatgacactggagggagagtgttcacaattagt
gttgggattagaagtgagaccatgaaagtggaggcctgagtcctgtttat
tttcacacagtatgcatgcccgcacaacttctgggtgagctagaagaaat
ggaaaacattgaaaccccgctgtctagctctgagtcagggactgtaagct
tattttatttttactgtttctggtggtttgtttgatggcttaaaaaattt
ccataaaaaccattattttcttttaaaaagtatttattgttacctaaatg
aggagtctagaagagggcagcagatccctggagctgaaatcgcaggtggt
tgtcactcgccctgaggggctgctggggaccaatctctgcaactctgtaa
ctgcagcagctattacatcttgactaagacaagagacaagatggctgaga
catctcgacaagccctaaaatcaacttttcaaagtgttccattttctaaa
ttttcttcaacgtgcttggtatcataacctgacggttctaggccacgaag
acatgaatccttttgaaaattcagtggagtttcatccaggacctttctca
tctttccattgtgacttgatgacgtccgtgctagtgtctggctgtgctac
atctgctcctaaggtactgtgtcaacagtcccatcacccacctcagaaga
catctagatttcttcattctgaagagcgtttcaagttggcacttacattt
tggtccgtggatcttatgaatgaa
gaattctacagttaagccatctggaagaaggagatttcttttttggggaa
ttttgcattttcagactctcctggactggcccgttggacgatctccttca
cggggtgaggtgaggtagctgagctttctgaggaattagtccatgctagc
ccaactgttacctcatgtggggttactcctgctccttctgacctcctaaa
tgctggcagggcctcagagatactttctatctttttcttgacattggtta
tttacatccttttgtggtcaaccttactaagaagtctttcattttatcca
tatattcaaataaccaatcatttttataaaaaggttcattttgattattt
ttaattatgtgtagatgggtgtgcatctctgcatgtgagggcaggtgctc
acagatgccagaggcaaaatgagatggatcctctgggcttggttacagac
agctgtggccacctcattgggtgctgggataccagactcagatcctttga
cgaatcagcagctcttacctgctcagcttccttcctggctgccatttgct
tacttcagattgattttcattcttcatttattattattttttttgcttaa
aaatattttcatacaatatattttgattttggttttccccttccctcatc
tcctctctgatcctttccacctccatttataaaatgaacaacaaacaaaa
aagtgctaatttctctgtttttgagacttaaacagatttcaagatttctg
tattccctagcagtgagcctaaaatgttatcaaaagtcctttctactgat
atgttgctatatttagccagccatatatacatacatctagatattatgga
taaattcgtgtatatatttatatgtgtacatacacacaaattttcttcag
actctctctgtcacttttgcatgatgtgttatttagaggagctgtttagt
ggcagagtatccaatggctgctgcttgtgtaagggacatgggggacacgc
atctgcaagttttcctttgcccttctagtcattcagttgccttgcaatgc
gatcacaatagggggaacctcctctcttcccaggcctcaggattccttaa
attgggcgtggggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10348721_10349848
seq2: B6Ng01-014C04.b_49_1172

seq1  GAATTCCAGTGGCTCAGGATGACTCTTGTGGGCTTCAGTTGGGATAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGCTCAGGATGACTCTTGTGGGCTTCAGTTGGGATAGAAA  50

seq1  GTACAGAGGAGTTGGGGAAAGTGGGAATGTTTGATCTCTGTGTGGCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGGAGTTGGGGAAAGTGGGAATGTTTGATCTCTGTGTGGCTGGA  100

seq1  ATGAAACCAGAGCGGTCATGGAGTGAAGGCATGGAATAGTTCACGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCAGAGCGGTCATGGAGTGAAGGCATGGAATAGTTCACGAAGCA  150

seq1  GGCACACTCAAGTCTGAATCAAATGCCATAGGCACCCAAATGACGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACTCAAGTCTGAATCAAATGCCATAGGCACCCAAATGACGCTAAA  200

seq1  GTGCAGATACAGCATTCAATCCAGGGGTGGCAGCCTCTTGTCTGAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGATACAGCATTCAATCCAGGGGTGGCAGCCTCTTGTCTGAAGACA  250

seq1  AAGAGTGGAGTGCAAGACTATGACTTACAAGGTTGGTGAACCGAATACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGAGTGCAAGACTATGACTTACAAGGTTGGTGAACCGAATACTT  300

seq1  CAGTGTGTGAAAACAAGAGTCGTTGGTGGCTTTTTCATGGGAGTGTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTGAAAACAAGAGTCGTTGGTGGCTTTTTCATGGGAGTGTGATG  350

seq1  GGATTTAGTTACTGTCTAATGACACTGGAGGGAGAGTGTTCACAATTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAGTTACTGTCTAATGACACTGGAGGGAGAGTGTTCACAATTAGT  400

seq1  GTTGGGATTAGAAGTGAGACCATGAAAGTGGAGGCCTGAGTCCTGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGATTAGAAGTGAGACCATGAAAGTGGAGGCCTGAGTCCTGTTTAT  450

seq1  TTTCACACAGTATGCATGCCCGCACAACTTCTGGGTGAGCTAGAAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACAGTATGCATGCCCGCACAACTTCTGGGTGAGCTAGAAGAAAT  500

seq1  GGAAAACATTGAAACCCCGCTGTCTAGCTCTGAGTCAGGGACTGTAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACATTGAAACCCCGCTGTCTAGCTCTGAGTCAGGGACTGTAAGCT  550

seq1  TATTTTATTTTTACTGTTTCTGGTGGTTTGTTTGATGGCTTAAAAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTTACTGTTTCTGGTGGTTTGTTTGATGGCTTAAAAAATTT  600

seq1  CCATAAAAACCATTATTTTCTTTTAAAAAGTATTTATTGTTACCTAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAACCATTATTTTCTTTTAAAAAGTATTTATTGTTACCTAAATG  650

seq1  AGGAGTCTAGAAGAGGGCAGCAGATCCCTGGAGCTGAAATCGCAGGTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTAGAAGAGGGCAGCAGATCCCTGGAGCTGAAATCGCAGGTGGT  700

seq1  TGTCACTCGCCCTGAGGGGCTGCTGGGGACCAATCTCTGCAACTCTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCGCCCTGAGGGGCTGCTGGGGACCAATCTCTGCAACTCTGTAA  750

seq1  CTGCAGCAGCTATTACATCTTGACTAAGACAAGAGACAAGATGGCTGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCAGCTATTACATCTTGACTAAGACAAGAGACAAGATGGCTGAGA  800

seq1  CATCTCGACAAGCCCTAAAATCAACTTTTCAAAGTGTTCCATTTTCTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGACAAGCCCTAAAATCAACTTTTCAAAGTGTTCCATTTTCTAAA  850

seq1  TTTTCTTCAACGTGCTTGGTATCATAACCTGGACGGTTCTAGGCCACGAA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTCTTCAACGTGCTTGGTATCATAACCT-GACGGTTCTAGGCCACGAA  899

seq1  GACATGAATCCTTTTGAAAATTCAGTGGAGTTTCATCCAGGAACCTTTCT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GACATGAATCCTTTTGAAAATTCAGTGGAGTTTCATCCAGG-ACCTTTCT  948

seq1  CATCTTTCCATTGTGACTTTGATGACGTCCGTGCTAGTGTCTGGCTTGTG  1000
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  CATCTTTCCATTGTGAC-TTGATGACGTCCGTGCTAGTGTCTGGC-TGTG  996

seq1  CTACATCTGCTCCTAAGGTACTGTGTCAACAGTCCCATCACCCA-CTCAG  1049
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTACATCTGCTCCTAAGGTACTGTGTCAACAGTCCCATCACCCACCTCAG  1046

seq1  -AGACATCTAGATTTTCTCA-TCTGAAGAGCGTTTCAAAGTTTGCACTTT  1097
       ||||||||||||||  ||| ||||||||||||||| ||||| |||| ||
seq2  AAGACATCTAGATTTCTTCATTCTGAAGAGCGTTTC-AAGTTGGCAC-TT  1094

seq1  ACATTTTGGTCTGT-GATCTATTATGAATGAA  1128
      ||||||||||| || ||||  |||||||||||
seq2  ACATTTTGGTCCGTGGATC--TTATGAATGAA  1124

seq1: chr8_10492190_10493316
seq2: B6Ng01-014C04.g_67_1181 (reverse)

seq1  GACCCCAGCCCCAAATTCAAGGAATCCTGAAGCCTGGGGGACAGAGAGGA  50
      ||||||| | || |||| |||||||||||| |||||||    ||||||||
seq2  GACCCCA-CGCCCAATTTAAGGAATCCTGAGGCCTGGG---AAGAGAGGA  46

seq1  GGTTCACCC-ATTGTGAT-GCGATGCAAAGCAACTGGAAATGAACTAGAA  98
      ||||| ||| |||||||| ||  ||||| |||||||  |||| ||||| |
seq2  GGTTCCCCCTATTGTGATCGCATTGCAAGGCAACTG--AATG-ACTAG-A  92

seq1  AGGGCAAAGGGAAAACCTGCAGATGCGGTGTCCCCCAAGTCCCCTGCCAC  148
      |||||||| ||||||| ||||||||| |||||||||| || ||||  |||
seq2  AGGGCAAA-GGAAAACTTGCAGATGC-GTGTCCCCCATGT-CCCTTACAC  139

seq1  AAGCAGCAGCCATTGGATACTCTGCCACTAAACAGCTCCCTCTAAATAAC  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGCAGCAGCCATTGGATACTCTGCCACTAAACAGCT-CCTCTAAATAAC  188

seq1  ACATCATGCAAAAGTGACAGAGGAGAGTCTGAAGAAAATTTGTGTGTATG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACATCATGCAAAAGTGACAGA-GAGAGTCTGAAGAAAATTTGTGTGTATG  237

seq1  TACACATATAAATATATACACGAATTTATCCATGAATATCTAGATGTATG  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACACATATAAATATATACACGAATTTATCCAT-AATATCTAGATGTATG  286

seq1  TATATATGGCTGGCTAAATATAGCAACATATCAGTAGAAAGGACTTTTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGCTGGCTAAATATAGCAACATATCAGTAGAAAGGACTTTTGA  336

seq1  TAACATTTTAGGCTCACCTGCTAGGGAATACAGAAATCTTGAAATCTGTT  398
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAACATTTTAGGCTCA-CTGCTAGGGAATACAGAAATCTTGAAATCTGTT  385

seq1  TAAGTCTCAAAAACAGAGAAATTAGCACTTTTTTG-TTGTTGTTCATTTT  447
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAAGTCTCAAAAACAGAGAAATTAGCACTTTTTTGTTTGTTGTTCATTTT  435

seq1  ATAAATGGAGGTGGAAAGGATCAGAGAGGAGATGAGGGAAGGGGAAAACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGAGGTGGAAAGGATCAGAGAGGAGATGAGGGAAGGGGAAAACC  485

seq1  AAAATCAAAATATATTGTATGAAAATATTTTTAAGCAAAAAAAATAATAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAATATATTGTATGAAAATATTTTTAAGCAAAAAAAATAATAA  535

seq1  TAAATGAAGAATGAAAATCAATCTGAAGTAAGCAAATGGCAGCCAGGAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGAATGAAAATCAATCTGAAGTAAGCAAATGGCAGCCAGGAAG  585

seq1  GAAGCTGAGCAGGTAAGAGCTGCTGATTCGTCAAAGGATCTGAGTCTGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGAGCAGGTAAGAGCTGCTGATTCGTCAAAGGATCTGAGTCTGGT  635

seq1  ATCCCAGCACCCAATGAGGTGGCCACAGCTGTCTGTAACCAAGCCCAGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACCCAATGAGGTGGCCACAGCTGTCTGTAACCAAGCCCAGAG  685

seq1  GATCCATCTCATTTTGCCTCTGGCATCTGTGAGCACCTGCCCTCACATGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATCTCATTTTGCCTCTGGCATCTGTGAGCACCTGCCCTCACATGC  735

seq1  AGAGATGCACACCCATCTACACATAATTAAAAATAATCAAAATGAACCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCACACCCATCTACACATAATTAAAAATAATCAAAATGAACCTT  785

seq1  TTTATAAAAATGATTGGTTATTTGAATATATGGATAAAATGAAAGACTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAAATGATTGGTTATTTGAATATATGGATAAAATGAAAGACTTC  835

seq1  TTAGTAAGGTTGACCACAAAAGGATGTAAATAACCAATGTCAAGAAAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAGGTTGACCACAAAAGGATGTAAATAACCAATGTCAAGAAAAAG  885

seq1  ATAGAAAGTATCTCTGAGGCCCTGCCAGCATTTAGGAGGTCAGAAGGAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGTATCTCTGAGGCCCTGCCAGCATTTAGGAGGTCAGAAGGAGC  935

seq1  AGGAGTAACCCCACATGAGGTAACAGTTGGGCTAGCATGGACTAATTCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTAACCCCACATGAGGTAACAGTTGGGCTAGCATGGACTAATTCCT  985

seq1  CAGAAAGCTCAGCTACCTCACCTCACCCCGTGAAGGAGATCGTCCAACGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCTCAGCTACCTCACCTCACCCCGTGAAGGAGATCGTCCAACGG  1035

seq1  GCCAGTCCAGGAGAGTCTGAAAATGCAAAATTCCCCAAAAAAGAAATCTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCAGGAGAGTCTGAAAATGCAAAATTCCCCAAAAAAGAAATCTC  1085

seq1  CTTCTTCCAGATGGCTTAACTGTAGAATTC  1127
      ||||||||||||||||||||||||||||||
seq2  CTTCTTCCAGATGGCTTAACTGTAGAATTC  1115