BAC Information

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BAC

Clone NameB6Ng01-015F24
Chromosome8 (Build37)
Map Location 47,523,482 - 47,647,571
singlet/doubletdoublet
Overlap geneLOC667337, Acsl1, Mlf1ip
Upstream geneSorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt
Downstream geneCcdc111, Casp3, Irf2, Enpp6, Stox2, 4930448N21Rik, D030016E14Rik, Rwdd4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015F24.bB6Ng01-015F24.g
ACCDH849649DH849650
length1,0581,114
definitionDH849649|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F24, 5' end.DH849650|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,523,482 - 47,524,579)(47,646,456 - 47,647,571)
sequence
gaattcaaataaatcccgccgctctaaagttggcattcccaggtgttttg
atgcagtcgtgggaaagtaacaaaaggaatcccctacaaagtcctgcctc
cttaatactgtcacactttctcatgacaaaggccagttactctttccttg
ttcgtccacccagaggtgttttcagacatagagtcgccctagttatttta
ttggtttctatttccaccaagtcatgccaaagttgttttcctgaaatatc
cagattatagcactgctctacttagaaacatccgacggttccttgttacc
aacgttataaagtaagtacagactccataatttggcaatgttctccatca
cagaaacttcacgaaacagaagaaagaacgcatgccatcagaccctgcga
tcctcaagtactctggaattcccgttgagacggctctcacatccctttct
ttcaaatcgttctggcctccctttccccacagcctctgacctgagccgac
tcacttcagtcgggtgcagggcacgccacgtgctgtaaccatggttcctg
taaccttctgaaatcactcgaggtcactgcctttccctcacaagtacctc
cagtaaatctcattcaagctctgttctctaaagagctgtggcagggaact
aagaggtcagactagaaatcaaaggacagcagacagagtactctcttcca
aggacagaaccatatctgtgaactttataattggcagacttgctttagaa
aaaaaaaaaaaagaaagaaaagagcgtattggagctggagagatggctca
gcagtactgactgctcttcagaggacccagttcaattcccggcacccaca
tggcagctcacaactgtctgtacctccagttcaagggctcctgatccctc
acacacgcaggcaaaacacatgcatgtaataaatataataattttaaaaa
agaaaagatatacactacaaatacacttaacgattgacaattgtacatga
taaagcgagctatatgacaacctatgcagaaaaataaatagtttgaaata
agcatcta
gaattctttcttaacgcttcagatggaaaactatctttcctgggccggtc
tgacgggcagcagagaaaggcacttgccacaaagactgatggtctgagtc
aatcctgagacctgtaggctgcaagtgaagaaagacccgcacactcagtt
ccattgacgtgcccacatatgtctgtatgtacacacacacacacacacac
acacacacacacacagacacaagatagatgaatgtaactgattttttaaa
acttcctttactctaaagcatttctgtattagaaaagcctgctataggac
attcttctctgtttgcatgtactccagtaaaacaccaagtgtcttataat
gacgacagagggcagaacactccccataccttttttgtgctgaccttgat
agactcatttccacttgcttcatcttcagaagggtccaagctgtgtcaaa
caacaagccgtcagcatctcgtctcacataacgctttctacccgctgctt
ctgcgtgaaaccaagctgaaggtgccgagttttctctctcgtgggcgggc
ctgtcacccttgattgactgcccgtttcccatgtgtgctcacatcagttt
tccctaggcgagcgagcaatcgtggtccagagtggtcaagtctgagaact
gctcccaacgctgtggggcatcgctgggcctacggctgggacaatgcctg
ctgcttgtagaacacagaagaccctgttctaatttagagccttgggtagg
cagacacaggcagactggggagtggaagacttaagagcaacaaccaaagc
tagatgctttcggattcaacagagagggcctcagatgtacagcttattca
tgacagaccagctaaccaggaggctggggagggacagaggaaaaaaggga
aagagagagagataaagagaagaaagaaagaggcagagatgcagaacagc
agttgaacaccctggggcaaagatgccaactgtcactgaggcttcttggg
ggtcttggaattgctaagctcctccccatgctctccccggccctgacttt
ctcttggtactatatgcaacctgccttaccttcactgaaccacccagtaa
tccagaatcagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_47523482_47524579
seq2: B6Ng01-015F24.b_42_1099

seq1  GAATTCAAATAAATCCCGCCGCTCTAAAGTTGGCATTCCCAGGTGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAATCCCGCCGCTCTAAAGTTGGCATTCCCAGGTGTTTTG  50

seq1  ATGCAGTCGTGGGAAAGTAACAAAAGGAATCCCCTACAAAGTCCTGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTCGTGGGAAAGTAACAAAAGGAATCCCCTACAAAGTCCTGCCTC  100

seq1  CTTAATACTGTCACACTTTCTCATGACAAAGGCCAGTTACTCTTTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACTGTCACACTTTCTCATGACAAAGGCCAGTTACTCTTTCCTTG  150

seq1  TTCGTCCACCCAGAGGTGTTTTCAGACATAGAGTCGCCCTAGTTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCCACCCAGAGGTGTTTTCAGACATAGAGTCGCCCTAGTTATTTTA  200

seq1  TTGGTTTCTATTTCCACCAAGTCATGCCAAAGTTGTTTTCCTGAAATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTCTATTTCCACCAAGTCATGCCAAAGTTGTTTTCCTGAAATATC  250

seq1  CAGATTATAGCACTGCTCTACTTAGAAACATCCGACGGTTCCTTGTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATAGCACTGCTCTACTTAGAAACATCCGACGGTTCCTTGTTACC  300

seq1  AACGTTATAAAGTAAGTACAGACTCCATAATTTGGCAATGTTCTCCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTATAAAGTAAGTACAGACTCCATAATTTGGCAATGTTCTCCATCA  350

seq1  CAGAAACTTCACGAAACAGAAGAAAGAACGCATGCCATCAGACCCTGCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTTCACGAAACAGAAGAAAGAACGCATGCCATCAGACCCTGCGA  400

seq1  TCCTCAAGTACTCTGGAATTCCCGTTGAGACGGCTCTCACATCCCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAGTACTCTGGAATTCCCGTTGAGACGGCTCTCACATCCCTTTCT  450

seq1  TTCAAATCGTTCTGGCCTCCCTTTCCCCACAGCCTCTGACCTGAGCCGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCGTTCTGGCCTCCCTTTCCCCACAGCCTCTGACCTGAGCCGAC  500

seq1  TCACTTCAGTCGGGTGCAGGGCACGCCACGTGCTGTAACCATGGTTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCAGTCGGGTGCAGGGCACGCCACGTGCTGTAACCATGGTTCCTG  550

seq1  TAACCTTCTGAAATCACTCGAGGTCACTGCCTTTCCCTCACAAGTACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCTGAAATCACTCGAGGTCACTGCCTTTCCCTCACAAGTACCTC  600

seq1  CAGTAAATCTCATTCAAGCTCTGTTCTCTAAAGAGCTGTGGCAGGGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATCTCATTCAAGCTCTGTTCTCTAAAGAGCTGTGGCAGGGAACT  650

seq1  AAGAGGTCAGACTAGAAATCAAAGGACAGCAGACAGAGTACTCTCTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCAGACTAGAAATCAAAGGACAGCAGACAGAGTACTCTCTTCCA  700

seq1  AGGACAGAACCATATCTGTGAACTTTATAATTGGCAGACTTGCTTTAAGA  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGACAGAACCATATCTGTGAACTTTATAATTGGCAGACTTGCTTT-AGA  749

seq1  AAAAAAAAAAAAAGAAAGAAAAGAGCGTATTGGAGCTGGAGAGATGGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAAAGAAAAGAGCGTATTGGAGCTGGAGAGATGGCTC  799

seq1  AGCAGTACTGACTGCTCTTCCAGAGGACCCAGGTTCAATTCCCGGCACCC  850
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  AGCAGTACTGACTGCTCTT-CAGAGGACCCA-GTTCAATTCCCGGCACCC  847

seq1  ACATGGCAGCTCACAACTGTCTGTACCTCCAGTTCCAGGGGCTCTGATCC  900
      ||||||||||||||||||||||||||||||||||| ||||   ||||| |
seq2  ACATGGCAGCTCACAACTGTCTGTACCTCCAGTTCAAGGGCTCCTGAT-C  896

seq1  CCTCACACACGCAGGCAAAACACCAATGCATGTAAAATAAAATAATAAAT  950
      |||||||||||||||||||||||  |||||||||| | || |||||||  
seq2  CCTCACACACGCAGGCAAAACAC--ATGCATGTAATA-AATATAATAA--  941

seq1  AATTTTTTTTAAAAAAAGAAAAGAGTATACACCTACAAATACAACATTAA  1000
             ||| ||||||||||||| |||||| ||||||||   ||| | |
seq2  -------TTTTAAAAAAGAAAAGA-TATACA-CTACAAAT---ACACTTA  979

seq1  ACGGAATTGACAATTGTTTACAAATGAATTAAAAGCGAGCCTATATGACA  1050
      |||  ||||||||||||    | ||||    |||||||| ||||||||||
seq2  ACG--ATTGACAATTGT----ACATGA---TAAAGCGAG-CTATATGACA  1019

seq1  AACATAATGCAGGAAAAAAATAACATAATGTTTGAAAATAAGCATCTA  1098
      | |   ||||||   |||||||| |||  ||||| |||||||||||||
seq2  ACC--TATGCAG---AAAAATAA-ATA--GTTTG-AAATAAGCATCTA  1058

seq1: chr8_47646456_47647571
seq2: B6Ng01-015F24.g_69_1182 (reverse)

seq1  AGGCTGATCTGGGATTACTGCGTGG-TCAGTGAAAGTAAGGCAGGGTTTG  49
      ||||||||   ||||||||| |||| |||||||| ||||||||||  |||
seq2  AGGCTGATTCTGGATTACTGGGTGGTTCAGTGAAGGTAAGGCAGG--TTG  48

seq1  CATATAAGTA-CAAGAGAAAGTCAGGGCCGGGGGAGGCATGGGGA-GAGC  97
      ||||| |||| ||||||||||||||||||||||   ||||||||| ||||
seq2  CATAT-AGTACCAAGAGAAAGTCAGGGCCGGGGAGAGCATGGGGAGGAGC  97

seq1  TTAGCATGTCCCAGGACCCCAAGAGGCCTCAGTGACAGTTGGCACCTTTG  147
      ||||||  ||| ||  |||||||| ||||||||||||||||||| |||||
seq2  TTAGCAATTCCAAGACCCCCAAGAAGCCTCAGTGACAGTTGGCATCTTTG  147

seq1  CCCCAGGGTGTTCAACTGCTTGTTCTTGCATCTCTGCCTCTTTTCTTTCT  197
      ||||||||||||||||||| ||||| |||||||||||||| |||||||||
seq2  CCCCAGGGTGTTCAACTGC-TGTTC-TGCATCTCTGCCTC-TTTCTTTCT  194

seq1  TCTCTTTATCTCTCTCTCTTTCCCTTTTTTCCTCTGTCCCTCCCCAGCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATCTCTCTCTCTTTCCCTTTTTTCCTCTGTCCCTCCCCAGCCT  244

seq1  CCTGGTTAGCTGGTCTGTCATGAATAAGCTGTACATCTGAGGCCCTCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTAGCTGGTCTGTCATGAATAAGCTGTACATCTGAGGCCCTCTCT  294

seq1  GTTGAATCCG-AAGCATCTAGCTTTGGTTGTTGCTCTTAAGTCTTCCACT  346
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATCCGAAAGCATCTAGCTTTGGTTGTTGCTCTTAAGTCTTCCACT  344

seq1  CCCCAGTCTGCCTGTGTCTGCCTACCCAAGGCTCTAAATTAGAACAGGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTCTGCCTGTGTCTGCCTACCCAAGGCTCTAAATTAGAACAGGGT  394

seq1  CTTCTGTGTTCTACAAGCAGCAGGCATTGTCCCAGCCGTAGGCCCAGCGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGTTCTACAAGCAGCAGGCATTGTCCCAGCCGTAGGCCCAGCGA  444

seq1  TGCCCCACAGCGTTGGGAGCAGTTCTCAGACTTGACCACTCTGGACCACG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCACAGCGTTGGGAGCAGTTCTCAGACTTGACCACTCTGGACCACG  494

seq1  ATTGCTCGCTCGCCTAGGGAAAACTGATGTGAGCACACATGGGAAACGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCGCTCGCCTAGGGAAAACTGATGTGAGCACACATGGGAAACGGG  544

seq1  CAGTCAATCAAGGGTGACAGGCCCGCCCACGAGAGAGAAAACTCGGCACC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATCAAGGGTGACAGGCCCGCCCACGAGAGAGAAAACTCGGCACC  594

seq1  TTCAGCTTGGTTTCACGCAGAAGCAGCGGGTAGAAAGCGTTATGTGAGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTGGTTTCACGCAGAAGCAGCGGGTAGAAAGCGTTATGTGAGAC  644

seq1  GAGATGCTGACGGCTTGTTGTTTGACACAGCTTGGACCCTTCTGAAGATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTGACGGCTTGTTGTTTGACACAGCTTGGACCCTTCTGAAGATG  694

seq1  AAGCAAGTGGAAATGAGTCTATCAAGGTCAGCACAAAAAAGGTATGGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGTGGAAATGAGTCTATCAAGGTCAGCACAAAAAAGGTATGGGGA  744

seq1  GTGTTCTGCCCTCTGTCGTCATTATAAGACACTTGGTGTTTTACTGGAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGCCCTCTGTCGTCATTATAAGACACTTGGTGTTTTACTGGAGT  794

seq1  ACATGCAAACAGAGAAGAATGTCCTATAGCAGGCTTTTCTAATACAGAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAAACAGAGAAGAATGTCCTATAGCAGGCTTTTCTAATACAGAAA  844

seq1  TGCTTTAGAGTAAAGGAAGTTTTAAAAAATCAGTTACATTCATCTATCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAGAGTAAAGGAAGTTTTAAAAAATCAGTTACATTCATCTATCTT  894

seq1  GTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACAGAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACAGAC  944

seq1  ATATGTGGGCACGTCAATGGAACTGAGTGTGCGGGTCTTTCTTCACTTGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGGGCACGTCAATGGAACTGAGTGTGCGGGTCTTTCTTCACTTGC  994

seq1  AGCCTACAGGTCTCAGGATTGACTCAGACCATCAGTCTTTGTGGCAAGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAGGTCTCAGGATTGACTCAGACCATCAGTCTTTGTGGCAAGTG  1044

seq1  CCTTTCTCTGCTGCCCGTCAGACCGGCCCAGGAAAGATAGTTTTCCATCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTGCTGCCCGTCAGACCGGCCCAGGAAAGATAGTTTTCCATCT  1094

seq1  GAAGCGTTAAGAAAGAATTC  1116
      ||||||||||||||||||||
seq2  GAAGCGTTAAGAAAGAATTC  1114