BAC Information

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BAC

Clone NameB6Ng01-017E10
Chromosome8 (Build37)
Map Location 32,883,214 - 32,884,227
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731
Downstream geneLOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017E10.bB6Ng01-017E10.g
ACCDH851006DH851007
length1,2261,015
definitionDH851006|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E10, 5' end.DH851007|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaaaatggaagcaatcccactaaa
atcagggactagataaggctgtccactctcgccctacttattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaattcctaagcc
tgataaacagcttcaatgaagtagctggatataaaattaactcaaacaag
tcaattgcctttctgtacacaaaggataaacaggctgagagaaagaaatt
agagaaacaacacccttctcaatagtccatataaaataccttggcttgac
tctaactaaggaagtgaaagatctgtatgataagaacttcaagtctctga
agaaagaaattaaagatctcagaagatggaaagatctcccatgctcatgg
attggcaggccaacattgtaaaaatggctatcttgccaaaagcaatctac
agattcaatgcaatccccatcaaaattccaactcaattcttcaacaaatt
agaaagggcaatcagcagattcatctggaataacaaaaaacctaggatag
caaaaactcttctcaaggataaaagaacctctggtggaatcaccatgcct
gacctaaagctgtactacagagcaattgtgataaaaactgcatggtattg
gtatagtgacagacaagtagaccaatggaacagaattgaagacccagaga
tgaacccaaacctatggtcacttgatctttgacaagggagctaaaaccat
ccagtggaaaaagacagcattttcaacaatggtgctggcacaactggcgt
tatcatgtagaaaatgcaaattgatccattctatctcctgtactaaggtc
aaatctagtggattaggacctccacataaatcagagaccctgaactttat
gaggagaagtgggggaaagctgagaatggtacagggaaaattctgaatga
aaggcaatgcttgggctgagattctgaattgccaatgaaccctagatttc
aagctctcgcagcaagactcgtcatgaccaagatccccaacgtgtggaag
gactcgtaccgtctcccatactctga
gaattcttctgctctacttcataaccaggtgactatggagaactgtgatg
tgctatgcaggccaaaaagaagcgaggattgcaaagctttcactgtaagg
aactaataagtgcttgaagagataagcatctttagtctgatttaaatcct
atattatgtattgaatattatatggttctccatttataatacaattttta
tgttttaatgtagcagctaaaataaaatgtaaaagtagatttaataatac
atgtcaaccaaaactaaaattaaatttaaaaagcagcaccccggtaattc
tattataaagatgagagaatttagtgcctttggtgcaaatacaaatgaga
aatttattctgtccacaagaactctgcagaacattgtagtattctctttt
gtctgatttctgcaggggcattgggcaatgaccaggagggttgccagaga
tgagctgcctgctcagaggtagcatgagcgtacagggactggaaggtgac
agggaaaggagacagtagggaagacagaagaggcccaggtggcctgatgc
atcacattcgggaagtgtcaaaggaacagagaatgatttccctcccgtag
actgagcctgaccaggcttgttaagtggccttggggacagctgagggctg
tgattacttgagtgtatcgtcacttatgccattactgcagagataaaaca
ccaacagtgaaactccactcaaagctgcaagatcagaggggcatcaaatg
atccccagtgcatctctgccaaggcaccagacagtgaacacttgcttggc
acccagtttgaatgaagcatttatctttttgttctttccctctcctcccc
tgttaccctctcctctcctcaacccctctccttctttctctgccctgttg
cttttttctttctttgtagcaggtttccctggtacccaaggttggccttg
tcacttaacatcctctgcttcagcccttcctccacccacaacacaaggat
tgcaacactccgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32883214_32884227
seq2: B6Ng01-017E10.g_68_1082 (reverse)

seq1  AAAC-GAGTGTTTGCAATCCTGGTGTTGGTGGGTGGAGGAAGGGCTGAAG  49
      |||| ||||| |||||||||| ||||| ||||||||||||||||||||||
seq2  AAACGGAGTG-TTGCAATCCTTGTGTT-GTGGGTGGAGGAAGGGCTGAAG  48

seq1  CAGGGGATGGTAAGTGAC-AGGCCAACC-TGGGTGACAGGGAAACCTTGC  97
      ||| ||||| |||||||| ||||||||| |||||  |||||||||| |||
seq2  CAGAGGATGTTAAGTGACAAGGCCAACCTTGGGTACCAGGGAAACC-TGC  97

seq1  TACAAAGAAAG-AAAAAGCAACAGGGCAGAGAAAGAAGGAGAGGGGTTGA  146
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAAAGAAAAAAGCAACAGGGCAGAGAAAGAAGGAGAGGGGTTGA  147

seq1  GGAGAGGAGAGGGTAACAGGGGAGGAGAGGGAAGGAAC-AAAAGATAAAT  195
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  GGAGAGGAGAGGGTAACAGGGGAGGAGAGGGAAAGAACAAAAAGATAAAT  197

seq1  GCTTCATTCAAACTGGGTGCCAAGCAAGTGTTCACTGTCTGGTGCCTTGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTCAAACTGGGTGCCAAGCAAGTGTTCACTGTCTGGTGCCTTGG  247

seq1  CAGAGATGCACTGGGGATCATTTGATGCCCCTCTGATCTTTGCAGCTTTG  295
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGAGATGCACTGGGGATCATTTGATGCCCCTCTGATC-TTGCAGCTTTG  296

seq1  AGTGGAGTTTCACTGTTGGTGTTTTATCTCTGCAGTAATGGCATAAGTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGTTTCACTGTTGGTGTTTTATCTCTGCAGTAATGGCATAAGTGA  346

seq1  CGATACACTCAAGTAATCACAGCCCTCAGCTGTCCCCAAGGCCACTTAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACACTCAAGTAATCACAGCCCTCAGCTGTCCCCAAGGCCACTTAAC  396

seq1  AAGCCTGGTCAGGCTCAGTCTACGGGAGGGAAATCATTCTCTGTTCCTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGTCAGGCTCAGTCTACGGGAGGGAAATCATTCTCTGTTCCTTT  446

seq1  GACACTTCCCGAATGTGATGCATCAGGCCACCTGGGCCTCTTCTGTCTTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCCCGAATGTGATGCATCAGGCCACCTGGGCCTCTTCTGTCTTC  496

seq1  CCTACTGTCTCCTTTCCCTGTCACCTTCCAGTCCCTGTACGCTCATGCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGTCTCCTTTCCCTGTCACCTTCCAGTCCCTGTACGCTCATGCTA  546

seq1  CCTCTGAGCAGGCAGCTCATCTCTGGCAACCCTCCTGGTCATTGCCCAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGCAGGCAGCTCATCTCTGGCAACCCTCCTGGTCATTGCCCAAT  596

seq1  GCCCCTGCAGAAATCAGACAAAAGAGAATACTACAATGTTCTGCAGAGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGCAGAAATCAGACAAAAGAGAATACTACAATGTTCTGCAGAGTT  646

seq1  CTTGTGGACAGAATAAATTTCTCATTTGTATTTGCACCAAAGGCACTAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGACAGAATAAATTTCTCATTTGTATTTGCACCAAAGGCACTAAA  696

seq1  TTCTCTCATCTTTATAATAGAATTACCGGGGTGCTGCTTTTTAAATTTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCATCTTTATAATAGAATTACCGGGGTGCTGCTTTTTAAATTTAA  746

seq1  TTTTAGTTTTGGTTGACATGTATTATTAAATCTACTTTTACATTTTATTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTGGTTGACATGTATTATTAAATCTACTTTTACATTTTATTT  796

seq1  TAGCTGCTACATTAAAACATAAAAATTGTATTATAAATGGAGAACCATAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTACATTAAAACATAAAAATTGTATTATAAATGGAGAACCATAT  846

seq1  AATATTCAATACATAATATAGGATTTAAATCAGACTAAAGATGCTTATCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAATACATAATATAGGATTTAAATCAGACTAAAGATGCTTATCT  896

seq1  CTTCAAGCACTTATTAGTTCCTTACAGTGAAAGCTTTGCAATCCTCGCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCACTTATTAGTTCCTTACAGTGAAAGCTTTGCAATCCTCGCTT  946

seq1  CTTTTTGGCCTGCATAGCACATCACAGTTCTCCATAGTCACCTGGTTATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGCCTGCATAGCACATCACAGTTCTCCATAGTCACCTGGTTATG  996

seq1  AAGTAGAGCAGAAGAATTC  1014
      |||||||||||||||||||
seq2  AAGTAGAGCAGAAGAATTC  1015