BAC Information

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BAC

Clone NameB6Ng01-018G12
Chromosome8 (Build37)
Map Location 49,940,639 - 50,065,985
singlet/doubletdoublet
Overlap genenone
Upstream geneWwc2, LOC100040113, Dctd, Odz3, 2900073C17Rik
Downstream geneLOC100039866, 4930555F03Rik, LOC100039919
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018G12.bB6Ng01-018G12.g
ACCDH851818DH851819
length7131,088
definitionDH851818|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G12, 5' end.DH851819|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,065,276 - 50,065,985)(49,940,639 - 49,941,737)
sequence
gaattcttcataaagcatcccaatttttttctattctctagctgagctaa
ttttagaaagaagaagaagagagagagagagagagagagagagagagaga
gagagagaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag
gaaaggaaagaaaggaagaaaggaaagaagtgttttttaagacacatggt
aagattttcccttgtcctctaatctttgcagagagaactaattttttgac
tctgatttttctagtttctatgagtttaaaattcttatgattatgatggt
tctgattctgcctctccagagaggaaaataaccctttcctctgctccatt
tattctttccacaatgattgctcccccacgcaccccccaacactgtcctg
ccaagccctatttgttctatggatatgctgaagatacctggagtctctta
agtccctcttggtgttctgtgctttgctctgtctccaaacatttacacgg
catcctttccttcctgatagccctggggccaccctctctccccttgactc
actctctgttgctaacatgttacagttagttgtttcatgcaggagtaaat
atatgtagcaaaattatcagagcataggtcatatctgcatgttttttttt
atttttaaaatccaaagcaatttgtagaaaaccatatgcatattgcagtc
ctttcaaataata
gaattctttggtgaagtttgtattaggacatgcgaagctttggggtcaat
ctccagcatgataggtttaaaaaaaaaagaaaaagaaaaaagaaaaataa
gttttgtttattttgttgttcaatgtcctgtctattatttaaaattatag
tggtttttaaatgaacttttaaataaatactaatgttattgcaagaaatt
aaagacgtttatgtgaaatggaacggaaatcaactcaacaatacgctttt
caaaaaaattttcagaataagactgtcaaaaaatttagaaaggcacctag
ataccaggtacttttgagtcactatctaatgctcaggtgacaacacagcg
atgttgctgctggaggccattagtttttctttttaaacacaaggcatcat
tactacacatcccatcattaattccctttatcattacttccttctgtatg
atgtgacttcaacaagaagcattagcacttatggctataatcctatttct
ccatattctgtgaatgtaaagggttttattatgagtaatgaagaaagtat
gcagataaatctttctgatttgtcactagtaccctgccacaccctaccga
atccccatgtcacccctcctcctcctaatcacatttctaacatgagtgtg
tgtttaacagatagagatgattggcaggtggataacagatgatcaataga
gcataccatacattatctcaaacaaatcatcacaaatatctccccacaca
gttattaatatcttctccatcttaaattgagaacactgaagggtgaagca
tttgtccaatgtcagttgaaccaggccaagtatctttgttttaaagctct
aacacataaacactaatgactatctcttggtaaaacagaacttgttctaa
tgatacttcatttatgcgcaaatagattcatcaactgaagtgcaaactag
agttatgagggagaatgctttttcttcacgtacttgagactgacacgtgg
cccgtgtgcacttggcaagagcttcaccactggagcttatatttgtagcc
ggacccacacacccacaaaaactggcttttggggttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_50065276_50065985
seq2: B6Ng01-018G12.b_44_756 (reverse)

seq1  TATTATTTTGAAGGACTGCAATATGCATATGG-TTTCTACAAATTGCTTT  49
      ||||||||  |||||||||||||||||||||| |||||||||||||||||
seq2  TATTATTTGAAAGGACTGCAATATGCATATGGTTTTCTACAAATTGCTTT  50

seq1  GGATTT--CAAACTGAAAAGAACATGCAGATATGACCTATGCTCTGATAA  97
      ||||||   |||   |||| ||||||||||||||||||||||||||||||
seq2  GGATTTTAAAAATAAAAAAAAACATGCAGATATGACCTATGCTCTGATAA  100

seq1  TTTTGCTACATATATTTACTCCTGCATGTAACAACTAACTGTAACATGTT  147
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTGCTACATATATTTACTCCTGCATGAAACAACTAACTGTAACATGTT  150

seq1  AGCAACAGAGAGTGAGTCAAGGGGAGAGAGGGTGGCCCCAGGGCTATCAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGAGAGTGAGTCAAGGGGAGAGAGGGTGGCCCCAGGGCTATCAG  200

seq1  GAAGGAAAGGATGCCGTGTAAATGTTTGGAGACAGAGCAAAGCACAGAAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAGGATGCCGTGTAAATGTTTGGAGACAGAGCAAAGCACAGAAC  250

seq1  ACCAAGAGGGACTTAAGAGACTCCAGGTATCTTCAGCATATCCATAGAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAGGGACTTAAGAGACTCCAGGTATCTTCAGCATATCCATAGAAC  300

seq1  AAATAGGGCTTGGCAGGACAGTGTTGGGGGGTGCGTGGGGGAGCAATCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGGCTTGGCAGGACAGTGTTGGGGGGTGCGTGGGGGAGCAATCAT  350

seq1  TGTGGAAAGAATAAATGGAGCAGAGGAAAGGGTTATTTTCCTCTCTGGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAGAATAAATGGAGCAGAGGAAAGGGTTATTTTCCTCTCTGGAG  400

seq1  AGGCAGAATCAGAACCATCATAATCATAAGAATTTTAAACTCATAGAAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAATCAGAACCATCATAATCATAAGAATTTTAAACTCATAGAAAC  450

seq1  TAGAAAAATCAGAGTCAAAAAATTAGTTCTCTCTGCAAAGATTAGAGGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATCAGAGTCAAAAAATTAGTTCTCTCTGCAAAGATTAGAGGAC  500

seq1  AAGGGAAAATCTTACCATGTGTCTTAAAAAACACTTCTTTCCTTTCTTCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAATCTTACCATGTGTCTTAAAAAACACTTCTTTCCTTTCTTCC  550

seq1  TTTCTTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  600

seq1  TTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTT  650

seq1  CTTCTTTCTAAAATTAGCTCAGCTAGAGAATAGAAAAAAATTGGGATGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTAAAATTAGCTCAGCTAGAGAATAGAAAAAAATTGGGATGCT  700

seq1  TTATGAAGAATTC  710
      |||||||||||||
seq2  TTATGAAGAATTC  713

seq1: chr8_49940639_49941737
seq2: B6Ng01-018G12.g_67_1154

seq1  GAATTCTTTGGTGAAGTTTGTATTAGGACATGCGAAGCTTTGGGGTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTGAAGTTTGTATTAGGACATGCGAAGCTTTGGGGTCAAT  50

seq1  CTCCAGCATGATAGGTTTAAAAAAAAAAGAAAAAGAAAAAAGAAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCATGATAGGTTTAAAAAAAAAAGAAAAAGAAAAAAGAAAAATAA  100

seq1  GTTTTGTTTATTTTGTTGTTCAATGTCCTGTCTATTATTTAAAATTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTATTTTGTTGTTCAATGTCCTGTCTATTATTTAAAATTATAG  150

seq1  TGGTTTTTAAATGAACTTTTAAATAAATACTAATGTTATTGCAAGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTAAATGAACTTTTAAATAAATACTAATGTTATTGCAAGAAATT  200

seq1  AAAGACGTTTATGTGAAATGGAACGGAAATCAACTCAACAATACGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGTTTATGTGAAATGGAACGGAAATCAACTCAACAATACGCTTTT  250

seq1  CAAAAAAATTTTCAGAATAAGACTGTCAAAAAATTTAGAAAGGCACCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATTTTCAGAATAAGACTGTCAAAAAATTTAGAAAGGCACCTAG  300

seq1  ATACCAGGTACTTTTGAGTCACTATCTAATGCTCAGGTGACAACACAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGTACTTTTGAGTCACTATCTAATGCTCAGGTGACAACACAGCG  350

seq1  ATGTTGCTGCTGGAGGCCATTAGTTTTTCTTTTTAAACACAAGGCATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTGCTGGAGGCCATTAGTTTTTCTTTTTAAACACAAGGCATCAT  400

seq1  TACTACACATCCCATCATTAATTCCCTTTATCATTACTTCCTTCTGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACACATCCCATCATTAATTCCCTTTATCATTACTTCCTTCTGTATG  450

seq1  ATGTGACTTCAACAAGAAGCATTAGCACTTATGGCTATAATCCTATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTTCAACAAGAAGCATTAGCACTTATGGCTATAATCCTATTTCT  500

seq1  CCATATTCTGTGAATGTAAAGGGTTTTATTATGAGTAATGAAGAAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCTGTGAATGTAAAGGGTTTTATTATGAGTAATGAAGAAAGTAT  550

seq1  GCAGATAAATCTTTCTGATTTGTCACTAGTACCCTGCCACACCCTACCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAAATCTTTCTGATTTGTCACTAGTACCCTGCCACACCCTACCGA  600

seq1  ATCCCCATGTCACCCCTCCTCCTCCTAATCACATTTCTAACATGAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATGTCACCCCTCCTCCTCCTAATCACATTTCTAACATGAGTGTG  650

seq1  TGTTTAACAGATAGAGATGATTGGCAGGTGGATAACAGATGATCAATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACAGATAGAGATGATTGGCAGGTGGATAACAGATGATCAATAGA  700

seq1  GCATACCATACATTATCTCAAACAAATCATCACAAATATCTCCCCACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCATACATTATCTCAAACAAATCATCACAAATATCTCCCCACACA  750

seq1  GTTATTAATATCTTCTCCATCTTAAATTGAGAACACTGAAGGGTGAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAATATCTTCTCCATCTTAAATTGAGAACACTGAAGGGTGAAGCA  800

seq1  TTTGTCCAATGTCAGTTGAACCAGGCCAAGTATCTTTGTTTTCAAAGCTC  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTGTCCAATGTCAGTTGAACCAGGCCAAGTATCTTTGTTTT-AAAGCTC  849

seq1  TAACACATAAACACTAATGACTATCTCTTGGTAAAACAGAACTTGTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATAAACACTAATGACTATCTCTTGGTAAAACAGAACTTGTTCTA  899

seq1  ATGATAACTTCATTTATGCGCAAATAGATTCATCAACTGAAGTGCAAACT  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAT-ACTTCATTTATGCGCAAATAGATTCATCAACTGAAGTGCAAACT  948

seq1  AGAGTTTAATGAGGGAGAAATGCTTTTTCTTTCACGGTACTTGAGACTGA  1000
      ||||||  ||||||||| ||||||||||| ||||| ||||||||||||||
seq2  AGAGTT--ATGAGGGAG-AATGCTTTTTC-TTCAC-GTACTTGAGACTGA  993

seq1  CACGTTGGCCCCGTGTGCACTGGGCAAGAGCTTCACCACT-GAGC-TATA  1048
      |||||  | |||||||||||| |||||||||||||||||| |||| ||||
seq2  CACGT--GGCCCGTGTGCACTTGGCAAGAGCTTCACCACTGGAGCTTATA  1041

seq1  TTTGTAGCCCGGACCCACACACACACACAAAAACCTGCCTTTTGGGGTTG  1098
      ||||||| |||||||||||||| |||   |||| ||| ||||||||||||
seq2  TTTGTAG-CCGGACCCACACACCCAC---AAAAACTGGCTTTTGGGGTTG  1087

seq1  T  1099
      |
seq2  T  1088