MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-018I10
Chromosome	8 (Build37)
Map Location	131,228,870 - 131,229,630
singlet/doublet	singlet
Overlap gene	Itgb1
Upstream gene	Nrp1, LOC668494
Downstream gene	LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pard3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93742 MGI:2135608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG628847 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Nrp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18186 MGI:106206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668494 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668494
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	Itgb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16412 MGI:96610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC100042667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ccdc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74703 MGI:1921953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700008F21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75453 MGI:1922703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809049 GeneID:93742 MGI:2135608
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_033620.1

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365343 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013580.2

name	Pard3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802520 GeneID:93742 MGI:2135608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : par-3 (partitioning defective 3) homolog (C. elegans) transcript_id : NM_001013581.2

name	EG628847 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82918544 GeneID:628847 MGI:3644183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG628847 transcript_id : XM_895111.1

name	Nrp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679133 GeneID:18186 MGI:106206
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropilin 1 transcript_id : NM_008737.1

name	Itgb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45504393 GeneID:16412 MGI:96610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 1 (fibronectin receptor beta) transcript_id : NM_010578.1

name	LOC100042659 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259075 GeneID:100042659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Stretchin-Mlck CG18255-PD transcript_id : XM_001478601.1

name	LOC100042667 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259077 GeneID:100042667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100042667 transcript_id : XM_001478605.1

name	Ccdc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803055 GeneID:74703 MGI:1921953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 7 transcript_id : NM_029061.2

name	1700008F21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371598 GeneID:75453 MGI:1922703
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700008F21 gene transcript_id : NM_029292.2

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809050 CCDS:CCDS22788.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3 product : partitioning-defective protein 3 homolog isoform 3 protein_id : NP_296369.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888844 CCDS:CCDS22789.1 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : partitioning-defective protein 3 homolog isoform 1 protein_id : NP_001013599.1

name	Pard3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888842 GeneID:93742 MGI:2135608
definition	GO_component : GO:0005912 - adherens junction [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA]; GO:0005913 - cell-cell adherens junction [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence ISS]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IC]; GO:0007163 - establishment and/or maintenance of cell polarity [Evidence ISS] [Evidence TAS]; GO:0007205 - protein kinase C activation [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : partitioning-defective protein 3 homolog isoform 2 protein_id : NP_001013598.1

name	EG628847 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918545 GeneID:628847 MGI:3644183
definition	codon_start : 1 product : similar to insulinoma protein (rig) protein_id : XP_900204.1

name	Nrp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679134 CCDS:CCDS22790.1 GeneID:18186 MGI:106206
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IC] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0017154 - semaphorin receptor activity [Evidence IGI] [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016477 - cell migration [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IGI]; GO:0030517 - negative regulation of axon extension [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0048010 - vascular endothelial growth factor receptor signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : Neuropilin-1; transmembrane receptor product : neuropilin 1 protein_id : NP_032763.1

name	Itgb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45504394 CCDS:CCDS22791.1 GeneID:16412 MGI:96610
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042685 - cardioblast cell fate specification [Evidence IMP]; GO:0010002 - cardioblast differentiation [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0045596 - negative regulation of cell differentiation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP]; GO:0045214 - sarcomere organization [Evidence IMP] codon_start : 1 note : beta1 integrin product : integrin beta 1 (fibronectin receptor beta) protein_id : NP_034708.1

name	LOC100042659 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259076 GeneID:100042659
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478651.1

name	LOC100042667 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259078 GeneID:100042667
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478655.1

name	Ccdc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312852 GeneID:74703 MGI:1921953
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : testis-specific antigen; putative cancer/testis antigen product : coiled-coil domain containing 7 protein_id : NP_083337.1

name	1700008F21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386386 GeneID:75453 MGI:1922703
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC75453 protein_id : NP_083568.1

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 1 pseudo : _no_value

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 2 pseudo : _no_value

name	LOC668494 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668494
definition	number : 3 pseudo : _no_value

clone name	MSMg01-377M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-172H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-018I10.b	B6Ng01-018I10.g
ACC	DH851905	DH851906
length	921	767
definition	DH851905\|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I10, 5' end.	DH851906\|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I10, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttggctgtgtaccccattttttaataggtttatttgatt ttctagagtcctgcttcttgagtttttcaaatatattggatattagtccc ctatctgatttaggattggtaaagatcctttcccaatctgttggtggcct ttttgtcttattgacagtgtcttttgccttgcagaagctttcatatttta tgaggtcccatttgtcgattctttatcttacagcacaagccactgctgtt ctgttctggaaatttccccctgtgcccatatcttcgaggcttttccccaa tttctcctctacaagtttcagtgtctctggttttatgtgaagttccttga tccacatagacttgaccttaatacaaggagataagaatagaccaattccc attcttctatgtgctaaccaccagttgtgccagaccatttgttgaaaatg ctaactcttgtccactgaatgattttagctctcttgtcaaagatcaagtg actataggtttgtgggttcatttctgcgtcttcaaatctattccattact ctacctgtctgttgctgtaccagtaccatgcagttttgttttgttttttt tttaatcaaaattgctctgcttgaggtcaggcatggtgattccaccagga tttctattatcattgagaatagcttttgctatcttgggttttttgttctt ccagatgaatttgcaaattgccctttctaactcagtgaagaattgagtgg gaattttgatggggattgcattgaatctgtagattgctttcggcaggtag ccatttttactatattgatcctgccgatccatgagcatgggagatctttt catcttctgagatcttctttaatttctatctttagagacttgaagttcta tcatcagaactttcactccat	gaattcatgttttagcctgaggagaaataaaaactctttgcgttgtcagc atgggatgaatgattcagtgctggaaagtactcttggttctgaggtaact gggcctctggatgtgcctattaggttgagagccccaggagactgtgtaga tggacattctacaggacaagccgccacagctttctgctgtaggaatacta actttggtttctttagaatgtatgtaattttgtaatgtttaattgaatgc taagacatttcatttagagacgacagaaacacattctgcaagtgtggtgt gaagtaggtgaaaggtaaccatctggaagaaaggcagatggcagtgtaga gatgtttggagagaaatagattgagaagaaaaagaagggaaggtggaatg taatattttctctatcaataataatatacattttctgttatagatgaatt tgcaactggtttcctggattggattgatcagtttgatttgttctgtattt ggccaaacaggtaaaaaaaaaggttcttggttttttgttgttgttgttgt tgttgttatctttttatttcagcatcttgtatcaatagtcattggtcagt tagattctagaggggaagggcaaccctccatcagatcacaacactcctga aaatttgcagcatcttcttcactgtgaatgaaaaaacaggttttccaagg agtctgcaggggtctttcattatcagttaatcatcccctgacttcagtgt gaggattttgagagctc
quality values	Open. Hide. 47 47 27 27 61 30 50 61 61 28 53 53 47 61 43 32 61 43 43 47 61 61 61 61 61 47 43 52 37 36 31 23 14 14 22 35 32 36 47 40 52 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 28 36 30 28 28 52 59 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 61 61 59 61 59 59 59 52 59 52 41 44 23 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 39 61 59 61 59 59 59 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 59 52 52 52 59 52 61 59 52 52 49 52 52 61 59 61 59 61 61 59 61 59 59 61 59 61 59 59 61 59 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 52 59 59 52 59 52 59 52 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 55 61 61 61 55 16 12 8 23 27 61 61 61 61 61 61 49 49 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 55 61 61 61 61 55 61 61 61 61 55 55 61 61 55 61 61 61 61 61 61 61 55 61 55 55 61 61 55 55 61 61 61 61 61 61 53 61 47 43 45 50 37 50 50 52 61 50 52 53 52 47 47 53 47 39 53 25 24 26 11 20 31 61 61 61 61 61 61 27 37 61 61 61 35 61 61 43 37 61 53 61 61 61 52 61 53 52 61 61 53 27 61 50 53 50 53 61 53 53 61 61 53 50 61 39 20 31 32 47 24 47 47 35 35 38 47 32 53 53 53 50 47 43 57 39 17 37 34 36 42 53 53 45 57 47 30 53 27 53 53 57 57 47 50 45 34 52 50 53 50 52 57 53 53 40 53 57 53 57 34 18 10 36 53 45 39 38 43 27 30 52 30 38 52 52 22 57 57 33 39 40 57 53 42 53 50 32 43 19 12 50 53 57 34 32 36 38 52 37 30 18 15 21 31 35 25 57 42 33 33 28 52 30 50 37 53 53 35 40 30 57 57 40 33 42 42 50 57 57 29 50 32 42 37 34 27 34 38 33 37 36 29 38 37 40 17 36 21 33 14 52 52 34 40 57 36 22 25 33 18 41 23 27 11 26 30 40 31 33 37 53 57 57 33 17 33 23 29 16 11 33 18 37 31 36 30 29 27 37 24 44 18 36 47 33 30 15 17 38 48 25 33 20 28 51 48 10 23 20 43 19 34 21 47 35 9 11 8 13 30 19 16 27 13 22 30 17 29 23 21 18 34 33 23 48 33 14 43 31 48 27 23 30 33 29 29 10 17 6 5 4 15 12 25 23 29 29 29 27 31 31 25 36 29 46 28 17 10 7 10 6 5 7 20 6 7 11 7 25 26 19 25 39 25 21 23 10	Open. Hide. 61 61 52 49 55 43 37 49 37 33 22 22 19 8 6 19 26 28 55 59 59 61 61 61 61 59 61 59 59 59 59 61 61 61 61 59 61 61 61 61 61 59 61 61 61 55 61 59 59 61 61 61 61 59 59 32 24 30 35 50 43 59 61 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 59 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 59 59 59 59 49 59 59 59 61 61 61 61 59 59 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 59 61 59 59 61 61 61 61 59 59 52 36 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 49 52 31 59 43 32 59 52 52 32 26 43 50 45 27 13 35 27 52 59 39 59 59 45 45 59 52 59 61 59 61 59 61 61 61 59 59 59 52 59 59 59 61 61 61 61 59 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 59 59 59 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 52 59 61 59 59 43 61 59 59 59 59 59 59 52 61 59 59 45 59 41 52 52 52 52 38 37 59 59 61 59 59 41 59 59 37 61 59 61 49 52 36 59 49 43 61 59 59 59 52 59 52 59 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 52 59 49 49 52 49 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 52 49 59 41 35 59 49 59 61 59 59 59 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 59 61 59 59 61 52 59 49 61 61 43 61 59 49 14 19 18 15 29 36 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 52 52 39 52 43 52 39 37 55 37 49 52 52 49 61 61 61 61 61 61 61 49 55 61 55 61 61 61 61 61 61 55 61 61 61 55 61 43 21 47 61 55 61 61 23 22 37 19 27 22 18 13 13 10 14 49 50 50 50 43 49 55 47 43 55 55 55 43 43 26 55 50 55 55 55 50 61 36 38 55 55 35 61 61 55 47 33 47 55 61 36 37 29 10 35 33 43 43 35 35 35 53 43 61 53 52 50 35 35 21 25 26 30 31 32 32 47 43 31 27 32 29 35 50 53 43 47 24 39 40 28 19 42 39 28 33 32 10 33 32 24 23 31 27 24 33 50 61 17 24 27 16 13 27 24 23 17 9 23 38 25 28 13 9 18 10 22 29 16 16 25 30 17 24 38 33 13 27 39 61 61 53 24 34 28 23 20 39 27 24 17 14 21 17 17 20 16 16 19 8 7 14 23 23 27 24 20 47 38 26 32 32 8 45 43 23 15 31 30 22 14 17 18 6 13 27 28 24 30 26 16 23 17 22 20 23 37 27 22 10 12 6 10 8 9 22 22 14 20 14 9 8 9 16 6 7 13 8 20 10 39 19 12 33 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_131228870_131229630
seq2: B6Ng01-018I10.g_69_835

seq1  GAATTCATGTTTTAGCCTGAGGAGAAATAAAAACTCTTTGCGTTGTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTTTAGCCTGAGGAGAAATAAAAACTCTTTGCGTTGTCAGC  50

seq1  ATGGGATGAATGATTCAGTGCTGGAAAGTACTCTTGGTTCTGAGGTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGAATGATTCAGTGCTGGAAAGTACTCTTGGTTCTGAGGTAACT  100

seq1  GGGCCTCTGGATGTGCCTATTAGGTTGAGAGCCCCAGGAGACTGTGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTGGATGTGCCTATTAGGTTGAGAGCCCCAGGAGACTGTGTAGA  150

seq1  TGGACATTCTACAGGACAAGCCGCCACAGCTTTCTGCTGTAGGAATACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTCTACAGGACAAGCCGCCACAGCTTTCTGCTGTAGGAATACTA  200

seq1  ACTTTGGTTTCTTTAGAATGTATGTAATTTTGTAATGTTTAATTGAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGTTTCTTTAGAATGTATGTAATTTTGTAATGTTTAATTGAATGC  250

seq1  TAAGACATTTCATTTAGAGACGACAGAAACACATTCTGCAAGTGTGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATTTCATTTAGAGACGACAGAAACACATTCTGCAAGTGTGGTGT  300

seq1  GAAGTAGGTGAAAGGTAACCATCTGGAAGAAAGGCAGATGGCAGTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGTGAAAGGTAACCATCTGGAAGAAAGGCAGATGGCAGTGTAGA  350

seq1  GATGTTTGGAGAGAAATAGATTGAGAAGAAAAAGAAGGGAAGGTGGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTGGAGAGAAATAGATTGAGAAGAAAAAGAAGGGAAGGTGGAATG  400

seq1  TAATATTTTCTCTATCAATAATAATATACATTTTCTGTTATAGATGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCTCTATCAATAATAATATACATTTTCTGTTATAGATGAATT  450

seq1  TGCAACTGGTTTCCTGGATTGGATTGATCAGTTTGATTTGTTCTGTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTGGTTTCCTGGATTGGATTGATCAGTTTGATTTGTTCTGTATTT  500

seq1  GGCCAAACAGGTAAAAAAAAAGGTTCTTGGTTTTTTGTTGTTGTTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAACAGGTAAAAAAAAAGGTTCTTGGTTTTTTGTTGTTGTTGTTGT  550

seq1  TGTTGTTATCTTTTTATTTCAGCATCTTGTATCAATAGTCATTGGTCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTATCTTTTTATTTCAGCATCTTGTATCAATAGTCATTGGTCAGT  600

seq1  TAGATTCTAGA-GGGAAGGGCAACCCTCCATCAGATCACAACACTCCTGA  649
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCTAGAGGGGAAGGGCAACCCTCCATCAGATCACAACACTCCTGA  650

seq1  AAATTTGCAGCATCGTC-TCACTGTGAATG-AAAAACAGG-TTTCCAAGG  696
      |||||||||||||| || |||||||||||| ||||||||| |||||||||
seq2  AAATTTGCAGCATCTTCTTCACTGTGAATGAAAAAACAGGTTTTCCAAGG  700

seq1  AGCCTGCAGGGGTC-TTCATTATCAGTTAATCAT-CCCTGACTTCAGTGT  744
      || ||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  AGTCTGCAGGGGTCTTTCATTATCAGTTAATCATCCCCTGACTTCAGTGT  750

seq1  GAGGATTGTGAGAGCTC  761
      ||||||| |||||||||
seq2  GAGGATTTTGAGAGCTC  767

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information