BAC Information

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BAC

Clone NameB6Ng01-018K05
Chromosome8 (Build37)
Map Location 68,979,077 - 68,980,035
singlet/doubletsinglet
Overlap geneMarch1
Upstream geneLOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018K05.bB6Ng01-018K05.g
ACCDH851981DH851982
length9711,165
definitionDH851981|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K05, 5' end.DH851982|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtatatttattatgcaccttccagatatccctgcttccagt
tgagaaatccaatcctgtgtagactctagaccgaaacactccttctgtta
tttctctagtacatacagctggcaacagaaacgattaactccatgtggct
ctcagtccacctttgaaatccttgttcaattatcttaccaaccgtgcaac
acttgccctgttagataataatccatgcagtaaaaggtgtcagtcactac
atataacctggtaccacagtaaagtaatggactgaagcctgaaaggaaat
aaaaaccctaatatctcattgtgtgtgtgcacatgtgactgctacttgtg
tgtgtgcacatgggtacacacacacacacacacacacacacacacacaca
cggttgcccatcattcacactgggtatttccctatgccagtctccactga
gcagtttagttttgtttctcactgaacctggaactcactagttcagttcc
ttctggcctgggagccccggcatccttctgactccacctcccagtgctgg
cattacagtcacacactaccgtgctgtatttttttaccaacccattcatc
cccacactacttaaaatgatacaatgccatgaacctacctcattcttatt
gcagaatgagttacaaactggcttaatatttggagcctaggaaattattt
cttccaaattaagttgtatttgtgcgatcagtgatgattttcatatctcc
ccaaatgcagtcttacttgaatatatcagtgtcatgttttacactgtgga
ttcctgtctggaatgcaaagtgaaagcaagatgttctggtgataagcagt
gagtgagttaatcctttctgtttgcagtgggaaaagctccagatgaccac
gagcgaaaggaggaaatattcttgctctgtcacgttccacgtcatccgcc
gtcacctggtgtgtgggggcc
gaattctcacccgagaaataccgaatggtagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatagctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtatgtaggacacatgctccactct
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaattcgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctgcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggcttccca
gtggaggagttagagaaagagccaagagctaaagtgatctgcacccctat
ggtggacaacatatgacttaccagtactccggagctctggactcttgctg
ctattgtattatagatgtcctaataggccatctctgaaaagagagcttat
tgggaacgctattttattgtctcgatctgggaacgctaggtcaaaatagg
taggtggcgtatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68979077_68980035
seq2: B6Ng01-018K05.b_45_1007

seq1  GAATTCTGTGTATATTTATTATGCACCTTCCAGATATCCCTGCTTCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTATATTTATTATGCACCTTCCAGATATCCCTGCTTCCAGT  50

seq1  TGAGAAATCCAATCCTGTGTAGACTCTAGACCGAAACACTCCTTCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATCCAATCCTGTGTAGACTCTAGACCGAAACACTCCTTCTGTTA  100

seq1  TTTCTCTAGTACATACAGCTGGCAACAGAAACGATTAACTCCATGTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGTACATACAGCTGGCAACAGAAACGATTAACTCCATGTGGCT  150

seq1  CTCAGTCCACCTTTGAAATCCTTGTTCAATTATCTTACCAACCGTGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCCACCTTTGAAATCCTTGTTCAATTATCTTACCAACCGTGCAAC  200

seq1  ACTTGCCCTGTTAGATAATAATCCATGCAGTAAAAGGTGTCAGTCACTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCCTGTTAGATAATAATCCATGCAGTAAAAGGTGTCAGTCACTAC  250

seq1  ATATAACCTGGTACCACAGTAAAGTAATGGACTGAAGCCTGAAAGGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCTGGTACCACAGTAAAGTAATGGACTGAAGCCTGAAAGGAAAT  300

seq1  AAAAACCCTAATATCTCATTGTGTGTGTGCACATGTGACTGCTACTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCTAATATCTCATTGTGTGTGTGCACATGTGACTGCTACTTGTG  350

seq1  TGTGTGCACATGGGTACACACACACACACACACACACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCACATGGGTACACACACACACACACACACACACACACACACACA  400

seq1  CGGTTGCCCATCATTCACACTGGGTATTTCCCTATGCCAGTCTCCACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGCCCATCATTCACACTGGGTATTTCCCTATGCCAGTCTCCACTGA  450

seq1  GCAGTTTAGTTTTGTTTCTCACTGAACCTGGAACTCACTAGTTCAGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTAGTTTTGTTTCTCACTGAACCTGGAACTCACTAGTTCAGTTCC  500

seq1  TTCTGGCCTGGGAGCCCCGGCATCCTTCTGACTCCACCTCCCAGTGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCCTGGGAGCCCCGGCATCCTTCTGACTCCACCTCCCAGTGCTGG  550

seq1  CATTACAGTCACACACTACCGTGCTGTATTTTTTTACCAACCCATTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGTCACACACTACCGTGCTGTATTTTTTTACCAACCCATTCATC  600

seq1  CCCACACTACTTAAAATGATACAATGCCATGAACCTACCTCATTCTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTACTTAAAATGATACAATGCCATGAACCTACCTCATTCTTATT  650

seq1  GCAGAATGAGTTACAAACTGGCTTAATATTTGGAGCCTAGGAAATTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGAGTTACAAACTGGCTTAATATTTGGAGCCTAGGAAATTATTT  700

seq1  CTTCCAAATTAAGTTGTATTTGTGCGATCAGTGATGA-TTTCATATCTCC  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTCCAAATTAAGTTGTATTTGTGCGATCAGTGATGATTTTCATATCTCC  750

seq1  CCAAATGCAGTCTTACTTGAATATATCAGTGTCATG-TTTACACTGTGGA  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAAATGCAGTCTTACTTGAATATATCAGTGTCATGTTTTACACTGTGGA  800

seq1  TTCCTGTCTGGAATGCAAAGTGAAAGCAAGATGTTCTGGTGATAAGCAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCTGGAATGCAAAGTGAAAGCAAGATGTTCTGGTGATAAGCAGT  850

seq1  GAGTGAGTTAATCCTTTCTGTTTGCAGTGGGAAAAGCTCCAGATGACCAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTAATCCTTTCTGTTTGCAGTGGGAAAAGCTCCAGATGACCAC  900

seq1  GAGCGAAAGGAGGAAAATATTC-TGCTCTGTCACGTTCCACGTCAT-CGC  946
      ||||||||||||| |||||||| ||||||||||||||||||||||| |||
seq2  GAGCGAAAGGAGG-AAATATTCTTGCTCTGTCACGTTCCACGTCATCCGC  949

seq1  CGTCACCT-GTGTG  959
      |||||||| |||||
seq2  CGTCACCTGGTGTG  963