BAC Information

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BAC

Clone NameB6Ng01-018O18
Chromosome8 (Build37)2 (Build37)
Map Location 45,208,282 - 45,208,546148,985,068 - 148,986,200
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018O18.bB6Ng01-018O18.g
ACCDH852180DH852181
length4761,114
definitionDH852180|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O18, 5' end.DH852181|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(45,208,282 - 45,208,546)(148,985,068 - 148,986,200)
sequence
acatttcctgtcattgtattcccttgcactttgaaaacaactgctgtttt
ttacatttcagttgttctctctggagtgctacttaggaagagcaaagtca
agtcctcagtttttttgtagttcatgatttgttttgctttgtataggtca
tagtatatgtacaacacactcacagcaaagcagcttttaaacatagaagt
ggatgctcacagtcggctattggatggatcacatggcccccaatgaatga
gctagagaaagtaccaaagaagctaaagggatctgcaaccctataggtgg
aacaacattatgaactaaccagtaccccggagctcttgactctagctgca
tatgcatcaaaagatggcctagtcggccatcactggaaagagaggcccat
tggacacgcaaactttatatgccccagtacaggggaacgccagggccata
aaaggggagtgggtgggtaggggaga
gaattctacctgcaatgaatatgaagcagtaaaagagtacatgctggctt
caacctgtaatttaattatttgtttggtaaacatgaatatgctagcagat
ttattatttaggccaaatatttggaggtatttgcaatggcaatcacagag
aatttatgggtgtttttgttgttaaagaataaagataaactataaattaa
aatatgtttttatagagtaaagaaattaacattttctatattctattctg
atagtaaaagtttaaatgttcttatggtcaagtgctattatatagatggg
ctttgatgaagttaacagtatgatgaagaatcataaatgccatttataac
taagtctgtggctattggataaagacctcaatttttccaataatgtaatg
taagacagtacttggctaatatttccaagcctagtcttatttttcatgct
acaattctcattaaggaagataaagatgtgttggatgacacatgttgatt
atactattttttaaagttataaaatatgtatgaagatttgggaaatttga
caataacctgaagaaaatcattaaataaaaataagctgttgcttaggtct
tttaaactttttttggtagattttatcataccagtgaagaaagattaggg
acattgctatgataaatatgagaatctggttattagttgtttacaattag
tctttgttaggaatgtgcaagagtttccaactgtgagactagaaaaatcc
tcagatgctggagtaaagcttaatagtagttggaattttgaaaaacatgt
tcagagaattgtgaatggtaagagccccatcaaacagatgacagagcaaa
acaacagtgacattggaaaatgggatcaagtctatctagtacatactctc
aaatattcaggcatattcagcctgtcctgagagctagaatgtatctaaat
ttaagaaatgaataatgtgtaggcagaggaaatttgacctgttagcaaag
attctcttgaaaagtattgttctccactctttcatgtctacaggtgaaaa
gaagaagtaatactaaataaacggaatggtgattttgtgtaaaaaaatat
gtatcctaagtcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45208282_45208546
seq2: B6Ng01-018O18.b_247_525

seq1  AAGTGTATGCTCACAG-----TATTGGATGGATCATAGGGCCCCCAATGG  45
      ||||| ||||||||||     |||||||||||||| | ||||||||||| 
seq2  AAGTGGATGCTCACAGTCGGCTATTGGATGGATCACATGGCCCCCAATGA  50

seq1  AGGAGCTAGAGAAAGTATCCAAGGAGCTAAAGGTATCTGCAACCCTATAG  95
      | ||||||||||||||| | ||| ||||||||| ||||||||||||||||
seq2  ATGAGCTAGAGAAAGTACCAAAGAAGCTAAAGGGATCTGCAACCCTATAG  100

seq1  GTGGAATAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGC  145
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGC  150

seq1  TGCATATGTATCAAAAGATGGCCTAGTCGGTCATCACTGGAAAGAGAGGC  195
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TGCATATGCATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGC  200

seq1  CCATTG---------ACTTTATATGCCCCAGTACAGCGGAACGCCAGGGC  236
      ||||||         ||||||||||||||||||||| |||||||||||||
seq2  CCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGC  250

seq1  CAAAAAGTGGGAGTGGGTGGGTAGGGGAG  265
      || |||  |||||||||||||||||||||
seq2  CATAAAAGGGGAGTGGGTGGGTAGGGGAG  279

seq1: chr2_148985068_148986200
seq2: B6Ng01-018O18.g_69_1182

seq1  GAATTCTACCTGCAATGAATATGAAGCAGTAAAAGAGTACATGCTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTGCAATGAATATGAAGCAGTAAAAGAGTACATGCTGGCTT  50

seq1  CAACCTGTAATTTAATTATTTGTTTGGTAAACATGAATATGCTAGCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGTAATTTAATTATTTGTTTGGTAAACATGAATATGCTAGCAGAT  100

seq1  TTATTATTTAGGCCAAATATTTGGAGGTATTTGCAATGGCAATCACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTAGGCCAAATATTTGGAGGTATTTGCAATGGCAATCACAGAG  150

seq1  AATTTATGGGTGTTTTTGTTGTTAAAGAATAAAGATAAACTATAAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATGGGTGTTTTTGTTGTTAAAGAATAAAGATAAACTATAAATTAA  200

seq1  AATATGTTTTTATAGAGTAAAGAAATTAACATTTTCTATATTCTATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTTTTATAGAGTAAAGAAATTAACATTTTCTATATTCTATTCTG  250

seq1  ATAGTAAAAGTTTAAATGTTCTTATGGTCAAGTGCTATTATATAGATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAAGTTTAAATGTTCTTATGGTCAAGTGCTATTATATAGATGGG  300

seq1  CTTTGATGAAGTTAACAGTATGATGAAGAATCATAAATGCCATTTATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGAAGTTAACAGTATGATGAAGAATCATAAATGCCATTTATAAC  350

seq1  TAAGTCTGTGGCTATTGGATAAAGACCTCAATTTTTCCAATAATGTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTGTGGCTATTGGATAAAGACCTCAATTTTTCCAATAATGTAATG  400

seq1  TAAGACAGTACTTGGCTAATATTTCCAAGCCTAGTCTTATTTTTCATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGTACTTGGCTAATATTTCCAAGCCTAGTCTTATTTTTCATGCT  450

seq1  ACAATTCTCATTAAGGAAGATAAAGATGTGTTGGATGACACATGTTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCATTAAGGAAGATAAAGATGTGTTGGATGACACATGTTGATT  500

seq1  ATACTATTTTTTAAAGTTATAAAATATGTATGAAGATTTGGGAAATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATTTTTTAAAGTTATAAAATATGTATGAAGATTTGGGAAATTTGA  550

seq1  CAATAACCTGAAGAAAATCATTAAATAAAAATAAGCTGTTGCTTAGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACCTGAAGAAAATCATTAAATAAAAATAAGCTGTTGCTTAGGTCT  600

seq1  TTTAAACTTTTTTTGGTAGATTTTATCATACCAGTGAAGAAAGATTAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTTTTTTGGTAGATTTTATCATACCAGTGAAGAAAGATTAGGG  650

seq1  ACATTGCTATGATAAATATGAGAATCTGGTTATTAGTTGTTTACAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTATGATAAATATGAGAATCTGGTTATTAGTTGTTTACAATTAG  700

seq1  TCTTTGTTAGGAATGTGCAAGAGTTTCCAACTGTGAGACTAGAAAAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTAGGAATGTGCAAGAGTTTCCAACTGTGAGACTAGAAAAATCC  750

seq1  TCAGATGCTGGAGTAAAGCTTAATAGTAGTTGGAATTTTGAAAAACATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGCTGGAGTAAAGCTTAATAGTAGTTGGAATTTTGAAAAACATGT  800

seq1  TCAGAGAATTGTGAATGGTAAGAGCCCCATCAAACAGATGACAGAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAATTGTGAATGGTAAGAGCCCCATCAAACAGATGACAGAGCAAA  850

seq1  ACAACAGTGACATTGGAAAATGGGATCAAGTCTATTCTAGGTACATACTC  900
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  ACAACAGTGACATTGGAAAATGGGATCAAGTCTA-TCTA-GTACATACTC  898

seq1  TCAAATATTCAGGCATATTCAGCCTGTCCTGAGAGCTAGAATGTATCTAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAAATATTCAGGCATATTCAGCCTGTCCTGAGAGCTAGAATGTATCT-A  947

seq1  AATTTAAGAAATGAATAAATGTGTTAGGCAGAGGAAATTTTGACATGTAT  1000
      |||||||||||||||| |||||| ||||||||||||| |||||| ||| |
seq2  AATTTAAGAAATGAAT-AATGTG-TAGGCAGAGGAAA-TTTGACCTGT-T  993

seq1  AGCAAAGATTCTC-TGAAAAGGTTATTGTTCTCAACTCTTTTCCATGTCT  1049
      ||||||||||||| |||||||  |||||||||| |||||||  |||||||
seq2  AGCAAAGATTCTCTTGAAAAG--TATTGTTCTCCACTCTTT--CATGTCT  1039

seq1  ACAGTGAAAAAGAGGAAGTATATACTAAAATAAAAAAGGAGATGTGTATT  1099
      ||||   |||||| |||||| |||||||   | ||| ||| |||   |||
seq2  ACAGGTGAAAAGAAGAAGTA-ATACTAA---ATAAACGGA-ATGGTGATT  1084

seq1  TTGTGTAAGAAAAATATGTGTAATCTTAAGTCAC  1133
      |||||||| ||||||||||   ||| ||||||||
seq2  TTGTGTAA-AAAAATATGT---ATCCTAAGTCAC  1114