BAC Information

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BAC

Clone NameB6Ng01-019B15
Chromosome8 (Build37)
Map Location 35,433,908 - 35,569,972
singlet/doubletdoublet
Overlap geneLOC666746
Upstream geneWrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159
Downstream geneDusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019B15.bB6Ng01-019B15.g
ACCDH852292DH852293
length8831,021
definitionDH852292|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B15, 5' end.DH852293|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,569,091 - 35,569,972)(35,433,908 - 35,434,916)
sequence
gaattccatccatacaaggctggaaagctggggggaataaaagccagtgt
tccccacttaggagtctcttctgcaaacttttgtgtgtctgtacaaggac
atttattatagtattctctgtaaacgaatgagctgagtatgacagttgtt
tagagagaactaaactagcgaacagaacactaaggccatagccatcaggc
gttaaagagcaaagaacctttgtaaagaaggaagaggaaggacttctgag
aggcactgttagatgaaggaaaggagaagaaacagcaatttgcatggtgt
gaccccatttgtgtaagaaaacactcagtctttctattaggcacccctgc
ttctctctgcatcacctccattctttctccctttattctgctgggctgga
gtgagggcctatccatcctttgaggctgagtccagaaaaggaagagagtc
tcggtataaacgagtggggcgagccaagaagaaaatgtcagcttctcggg
aagagggcttcattattgtcagtaacggttacattggttaggagggggct
cccaccctgggcaggatggccaagtcaaaatgaagtcactgaacctgaag
ttgcaggtcaccaagccagcaaagccagttaagttgtttatttaactttc
tgagatatcaacagaataagagataacagccggatccaaacaagcaggtt
ttagttgacggagttttgcctccggtttaattaatgtgttccaggaaagg
acctttgaaaccgacgctgttccgtttcttctccaattctgctttcttca
ggcttctctgtttataaaaccaaatgttctctgctcagtctcttttggtt
gtgtgtgtgtgtgtgtgtgtgtgtgggtgcgtg
gaattctcacaacagcttccagaataatgtttgagcaactatctggacac
cctgtggcccaggccaagctgacaaataaagtgactcaccatgtccccca
attcccatagacatgtgtgagttggaagttgagtggtgagtctgctctag
gggcttacccctcctcttcagccacactcttgcttcctggttatcaacaa
ggaggtagggaatctttcttctcctcagacacttcagcaggttagtcaga
gcatctgcatggattcatagatgttgggaggaaaggcaaatttgacaagt
tagggaatgatacaccaccaccccccccatgtaggcctcctctgcctcct
cctgtctgcccctttccttctggcatctccctaaaagggtctgagcaggt
ctcggggccagtggtgaggtgggctcttgaaagcctgtcagctccttcag
aagctttggctgaggaagtcttcctgcttccctgggggaggggatcagat
cggtgagcagcagggccgtttttctctctacctagattctctaaccagca
gggagaagccatcaacacctcagagcaggcaggcagctgggccagcaagc
agcttattatctgcaacaagatcaccccattcaaaacccattttttttag
tctctttagcaagtcttttgtgttttccttgtcaatcacatatgtagagc
cttatcaatagtattcaaggaagattaaacattttaattgctctttgctc
tccctggtacaagccagcctgtatcacatggtttccgcaattatctcgct
gagctataagctcagccctccttgttttctttgctttctccctcccttcc
cagtttccatttttcctcctctcttggtccctcgccgctccttatttatc
caggagtatttcattaagctctgcgtggataacagcaggaaaaagatggg
cagaaccctttactcctgaattgatccagcgtagcggagggaaaagaaaa
agaagcaaccttatatatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_35569091_35569972
seq2: B6Ng01-019B15.b_48_930 (reverse)

seq1  CACGCACCAACACACACACACACACACACACAC-ACCAAAAGAGACTGAG  49
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  CACGCACCCACACACACACACACACACACACACAACCAAAAGAGACTGAG  50

seq1  CAGAGAACATTTGGTTTTATAAACAGAGAAGCCTGAAGAAAGCAGAATTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACATTTGGTTTTATAAACAGAGAAGCCTGAAGAAAGCAGAATTG  100

seq1  GAGAAGAAACGGAACAGCGTCGGTTTCAAAGGTCCTTTCCTGGAACACAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAACGGAACAGCGTCGGTTTCAAAGGTCCTTTCCTGGAACACAT  150

seq1  TAATTAAACCGGAGGCAAAACTCCGTCAACTAAAACCTGCTTGTTTGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAACCGGAGGCAAAACTCCGTCAACTAAAACCTGCTTGTTTGGAT  200

seq1  CCGGCTGTTATCTCTTATTCTGTTGATATCTCAGAAAGTTAAATAAACAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTGTTATCTCTTATTCTGTTGATATCTCAGAAAGTTAAATAAACAA  250

seq1  CTTAACTGGCTTTGCTGGCTTGGTGACCTGCAACTTCAGGTTCAGTGACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTGGCTTTGCTGGCTTGGTGACCTGCAACTTCAGGTTCAGTGACT  300

seq1  TCATTTTGACTTGGCCATCCTGCCCAGGGTGGGAGCCCCCTCCTAACCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGACTTGGCCATCCTGCCCAGGGTGGGAGCCCCCTCCTAACCAA  350

seq1  TGTAACCGTTACTGACAATAATGAAGCCCTCTTCCCGAGAAGCTGACATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCGTTACTGACAATAATGAAGCCCTCTTCCCGAGAAGCTGACATT  400

seq1  TTCTTCTTGGCTCGCCCCACTCGTTTATACCGAGACTCTCTTCCTTTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTGGCTCGCCCCACTCGTTTATACCGAGACTCTCTTCCTTTTCT  450

seq1  GGACTCAGCCTCAAAGGATGGATAGGCCCTCACTCCAGCCCAGCAGAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAGCCTCAAAGGATGGATAGGCCCTCACTCCAGCCCAGCAGAATA  500

seq1  AAGGGAGAAAGAATGGAGGTGATGCAGAGAGAAGCAGGGGTGCCTAATAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAAAGAATGGAGGTGATGCAGAGAGAAGCAGGGGTGCCTAATAG  550

seq1  AAAGACTGAGTGTTTTCTTACACAAATGGGGTCACACCATGCAAATTGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGAGTGTTTTCTTACACAAATGGGGTCACACCATGCAAATTGCT  600

seq1  GTTTCTTCTCCTTTCCTTCATCTAACAGTGCCTCTCAGAAGTCCTTCCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCTCCTTTCCTTCATCTAACAGTGCCTCTCAGAAGTCCTTCCTC  650

seq1  TTCCTTCTTTACAAAGGTTCTTTGCTCTTTAACGCCTGATGGCTATGGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTTTACAAAGGTTCTTTGCTCTTTAACGCCTGATGGCTATGGCC  700

seq1  TTAGTGTTCTGTTCGCTAGTTTAGTTCTCTCTAAACAACTGTCATACTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTCTGTTCGCTAGTTTAGTTCTCTCTAAACAACTGTCATACTCA  750

seq1  GCTCATTCGTTTACAGAGAATACTATAATAAATGTCCTTGTACAGACACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCGTTTACAGAGAATACTATAATAAATGTCCTTGTACAGACACA  800

seq1  CAAAAGTTTGCAGAAGAGACTCCTAAGTGGGGAACACTGGCTTTTATTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTTGCAGAAGAGACTCCTAAGTGGGGAACACTGGCTTTTATTCC  850

seq1  CCCCAGCTTTCCAGCCTTGTATGGATGGAATTC  882
      |||||||||||||||||||||||||||||||||
seq2  CCCCAGCTTTCCAGCCTTGTATGGATGGAATTC  883

seq1: chr8_35433908_35434916
seq2: B6Ng01-019B15.g_70_1076

seq1  GAATTCTCACAACAGCTTCCAGAATAATGTTTGAGCAACTATCTGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAACAGCTTCCAGAATAATGTTTGAGCAACTATCTGGACAC  50

seq1  CCTGTGGCCCAGGCCAAGCTGACAAATAAAGTGACTCACCATGTCCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCCCAGGCCAAGCTGACAAATAAAGTGACTCACCATGTCCCCCA  100

seq1  ATTCCCATAGACATGTGTGAGTTGGAAGTTGAGTGGTGAGTCTGCTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATAGACATGTGTGAGTTGGAAGTTGAGTGGTGAGTCTGCTCTAG  150

seq1  GGGCTTACCCCTCCTCTTCAGCCACACTCTTGCTTCCTGGTTATCAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTACCCCTCCTCTTCAGCCACACTCTTGCTTCCTGGTTATCAACAA  200

seq1  GGAGGTAGGGAATCTTTCTTCTCCTCAGACACTTCAGCAGGTTAGTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAGGGAATCTTTCTTCTCCTCAGACACTTCAGCAGGTTAGTCAGA  250

seq1  GCATCTGCATGGATTCATAGATGTTGGGAGGAAAGGCAAATTTGACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGCATGGATTCATAGATGTTGGGAGGAAAGGCAAATTTGACAAGT  300

seq1  TAGGGAATGATACACCACCACCCCCCCCATGTAGGCCTCCTCTGCCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATGATACACCACCACCCCCCCCATGTAGGCCTCCTCTGCCTCCT  350

seq1  CCTGTCTGCCCCTTTCCTTCTGGCATCTCCCTAAAAGGGTCTGAGCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTGCCCCTTTCCTTCTGGCATCTCCCTAAAAGGGTCTGAGCAGGT  400

seq1  CTCGGGGCCAGTGGTGAGGTGGGCTCTTGAAAGCCTGTCAGCTCCTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGGCCAGTGGTGAGGTGGGCTCTTGAAAGCCTGTCAGCTCCTTCAG  450

seq1  AAGCTTTGGCTGAGGAAGTCTTCCTGCTTCCCTGGGGGAGGGGATCAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTGGCTGAGGAAGTCTTCCTGCTTCCCTGGGGGAGGGGATCAGAT  500

seq1  CGGTGAGCAGCAGGGCCGTTTTTCTCTCTACCTAGATTCTCTAACCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAGCAGCAGGGCCGTTTTTCTCTCTACCTAGATTCTCTAACCAGCA  550

seq1  GGGAGAAGCCATCAACACCTCAGAGCAGGCAGGCAGCTGGGCCAGCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAGCCATCAACACCTCAGAGCAGGCAGGCAGCTGGGCCAGCAAGC  600

seq1  AGCTTATTATCTGCAACAAGATCACCCCATTCAAAACCCA-TTTTTTTAG  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGCTTATTATCTGCAACAAGATCACCCCATTCAAAACCCATTTTTTTTAG  650

seq1  TCTC-TTAGCAAGTC-TTTGTGTTTTCCTTGTCAATCACATATGTAGAGC  697
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAGCAAGTCTTTTGTGTTTTCCTTGTCAATCACATATGTAGAGC  700

seq1  CTTATCAATAGTATTCAAGGAAGATTAAACATTTTAATTGCTCTTTGCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAATAGTATTCAAGGAAGATTAAACATTTTAATTGCTCTTTGCTC  750

seq1  TCCCTGGTACAAGCCAGCCTGTATCACATGGTTTCCGCAATTATCTCGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGTACAAGCCAGCCTGTATCACATGGTTTCCGCAATTATCTCGCT  800

seq1  GAGCTATAAGCTCAGCCCTCCTTG-TTTCTTTGCTTTCTCCCTCCCTTCC  846
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  GAGCTATAAGCTCAGCCCTCCTTGTTTTCTTTGCTTTCTCCCTCCCTT-C  849

seq1  CCAGTTTCCATTTTTCCTCCTCTCCTTGGTCCCTCGCCGCTCCTTATTTA  896
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAGTTTCCATTTTTCCTCCTCT-CTTGGTCCCTCGCCGCTCCTTATTTA  898

seq1  TCCAGGAGGTATTCATTAAAGCTCTGCGTGGATAACAGCAGGTAGAAAGA  946
      ||||||||   |||||| |||||||||||||||||||||||| | |||||
seq2  TCCAGGAGTATTTCATT-AAGCTCTGCGTGGATAACAGCAGG-AAAAAGA  946

seq1  TGGGCGAGAACCCATTACTCCTGAGATGGTCACAGCGTAGCGGAGGGAAT  996
      ||||| ||||||| ||||||||||  || || ||||||||||||||||| 
seq2  TGGGC-AGAACCCTTTACTCCTGAATTGATC-CAGCGTAGCGGAGGGAAA  994

seq1  AGAAATAGAAGCA  1009
      ||||| |||||||
seq2  AGAAAAAGAAGCA  1007