BAC Information

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BAC

Clone NameB6Ng01-019M14
Chromosome8 (Build37)
Map Location 69,653,743 - 69,795,752
singlet/doubletdoublet
Overlap genenone
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
Downstream geneNat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M14.bB6Ng01-019M14.g
ACCDH852774DH852775
length1,0091,029
definitionDH852774|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M14, 5' end.DH852775|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,653,743 - 69,654,456)(69,794,721 - 69,795,752)
sequence
gaattccaaagtggatttattctacattttctgaaaggcaatgtatcacg
aacactttgtatttactagccatttgggtttcactttttgagaactttac
aggtcagcaaattttttaaactggttagtttgttttcttgctttatgaaa
aataattttgactgacttttattataacacatactaaaatactgattttt
aaaaagcactaatacgacaggtgagaggatgcgccagagaaccggacagc
ttctgggacaggaggaagcacagagccgctgaggcagcacccttggcggg
ccgcagacagccggccaccgtccggaccagaggacaggtgtccgcctggc
ttgggaggcggcctcagcctcagcagcagcggtcgccatcttggttccgg
gactccctggaacttaggaatttagtctgcagaggtgagagtctgcacca
cagaagctgacagcttctgggaactgccaaagcaacacagcttctgagaa
aggccctgttttgggcctacttcttcggcacaccttctctgtaagagagc
ttgccagcagagagtgctctgagcactgaaactcagaggagagaatctgt
ctcccaggtctgctgatagtcggtaacagaatcaccagaagaacaatctc
taaacagagtcaactataactactaactccagagattaccagatggcgaa
aggtaaacgtaggaatcttactaacaggaaccaagaccactcaccatcat
cagaacccagcactcccacttcgtccagtccaggacaccccaacacaccc
gaaaacctagacctagatttaaaagcatatctcatcatgatggtagagga
catcaagaaggactttaataaatcacttaaagaaatacaggagaacactg
ctaaagagttacaagtccttaaagaaaacaggaaaacacaatcaaacagg
tagaagtccttacagaaaagaggaaaaaaaaatacaaacagtgatggaat
tgaacaaac
gaattcttcagttctggcaaaagaaaactcagaccagccgggcagcgttg
gtgcatgcctttaatcccagcacttgggaggcagaggcaggcggatttct
gagttcgaggccagcctggtctacagagtgagttccaggacagtcagggt
tatacagagaaaccctgtctcgaaaaaagaaaagaaaagaaaaaaagaaa
aaagaaaaagaaagctcagacctagtctcctaaattgccagtttcagcct
ggagttagcctggttctggctaactcagtcctctcaccttgagaagtcta
tcaaaagtaagaacaccatgttttccaggagtgtcacagaaccaaggttg
gtgtagttgaagttctcaaatagcaccaagtacagattctatagagaacc
aacatttcttcgaggttcaaaaagtatcaaaacaagttctcagtttctac
tgatagacccacacacaacaaaggctttgctgaaatatttcactcaaacc
cacacacaaaggctttactatacatatcactacaaaggttggggcagttt
tgcttttatctttccaagaatataagagcattcaactaaggaagccagag
actagtagacaagtgaaacatctgaagaaagagcacagatagtcaggaca
aaatatcccaagtaaaagagtaaattggccaagtggtattgcccacctcc
aacttgtcttcactgccaactacagatataagtagtagtaaatggtcttt
ttatggttctaattcaattaaaaattaaagcttgctttgggattggagtg
tggctctctcattcactaaattcatccatgcttgttgaagaaattcctaa
atcgctgtctcatatcagaagagccacctggtatgggacagagataaata
aaataagggactattctcctgccactatctcataatcttttggttttatt
ttactctctaaacttttttaggttatagtattatctcaaatctgtaagaa
tcatcaggtatattaaaaattttctattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69653743_69654456
seq2: B6Ng01-019M14.b_48_761

seq1  GAATTCCAAAGTGGATTTATTCTACATTTTCTGAAAGGCAATGTATCACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTGGATTTATTCTACATTTTCTGAAAGGCAATGTATCACG  50

seq1  AACACTTTGTATTTACTAGCCATTTGGGTTTCACTTTTTGAGAACTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTTGTATTTACTAGCCATTTGGGTTTCACTTTTTGAGAACTTTAC  100

seq1  AGGTCAGCAAATTTTTTAAACTGGTTAGTTTGTTTTCTTGCTTTATGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCAAATTTTTTAAACTGGTTAGTTTGTTTTCTTGCTTTATGAAA  150

seq1  AATAATTTTGACTGACTTTTATTATAACACATACTAAAATACTGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTTGACTGACTTTTATTATAACACATACTAAAATACTGATTTTT  200

seq1  AAAAAGCACTAATACGACAGGTGAGAGGATGCGCCAGAGAACCGGACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCACTAATACGACAGGTGAGAGGATGCGCCAGAGAACCGGACAGC  250

seq1  TTCTGGGACAGGAGGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGCGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGACAGGAGGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGCGGG  300

seq1  CCGCAGACAGCCGGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGACAGCCGGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGC  350

seq1  TTGGGAGGCGGCCTCAGCCTCAGCAGCAGCGGTCGCCATCTTGGTTCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCGGCCTCAGCCTCAGCAGCAGCGGTCGCCATCTTGGTTCCGG  400

seq1  GACTCCCTGGAACTTAGGAATTTAGTCTGCAGAGGTGAGAGTCTGCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCTGGAACTTAGGAATTTAGTCTGCAGAGGTGAGAGTCTGCACCA  450

seq1  CAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAA  500

seq1  AGGCCCTGTTTTGGGCCTACTTCTTCGGCACACCTTCTCTGTAAGAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGTTTTGGGCCTACTTCTTCGGCACACCTTCTCTGTAAGAGAGC  550

seq1  TTGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGT  600

seq1  CTCCCAGGTCTGCTGATAGTCGGTAACAGAATCACCAGAAGAACAATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGGTCTGCTGATAGTCGGTAACAGAATCACCAGAAGAACAATCTC  650

seq1  TAAACAGAGTCAACTATAACTACTAACTCCAGAGATTACCAGATGGCGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGAGTCAACTATAACTACTAACTCCAGAGATTACCAGATGGCGAA  700

seq1  AGGTAAACGTAGGA  714
      ||||||||||||||
seq2  AGGTAAACGTAGGA  714

seq1: chr8_69794721_69795752
seq2: B6Ng01-019M14.g_69_1097 (reverse)

seq1  CAATAGAAAATTTAT-ATATACCTGATGA-TCTTACAGATTTTGAGATAA  48
      ||||||||||||| | ||||||||||||| ||||||||| ||||||||||
seq2  CAATAGAAAATTTTTAATATACCTGATGATTCTTACAGA-TTTGAGATAA  49

seq1  TACTTATAACTTAAAAAAGTTTTAGAGAGTAAAATAAAACCAAAAGATTA  98
      ||| |||||| |||||||| ||||||||||||||||||||||||||||||
seq2  TAC-TATAACCTAAAAAAG-TTTAGAGAGTAAAATAAAACCAAAAGATTA  97

seq1  TGAGATTAGTGGCAGGAGAATAGTCCCTTATTTTTATTTATCTCTGTCCC  148
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  TGAGA-TAGTGGCAGGAGAATAGTCCCTTA-TTTTATTTATCTCTGTCCC  145

seq1  ATACCAGGTGGCTCTTCTGATATGAGACAGCGATTTAGGAATTTCTTCAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGTGGCTCTTCTGATATGAGACAGCGATTTAGGAATTTCTTCAA  195

seq1  CAAGCATGGATGAATTTAGTGAATGAGAGAGCCACACTCCAATCCCAAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATGGATGAATTTAGTGAATGAGAGAGCCACACTCCAATCCCAAAG  245

seq1  CAAGCTTTAATTTTTAATTGAATTAGAACCATAAAAAGACCATTTACTAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTAATTTTTAATTGAATTAGAACCATAAAAAGACCATTTACTAC  295

seq1  TACTTATATCTGTAGTTGGCAGTGAAGACAAGTTGGAGGTGGGCAATACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATATCTGTAGTTGGCAGTGAAGACAAGTTGGAGGTGGGCAATACC  345

seq1  ACTTGGCCAATTTACTCTTTTACTTGGGATATTTTGTCCTGACTATCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCAATTTACTCTTTTACTTGGGATATTTTGTCCTGACTATCTGT  395

seq1  GCTCTTTCTTCAGATGTTTCACTTGTCTACTAGTCTCTGGCTTCCTTAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCTTCAGATGTTTCACTTGTCTACTAGTCTCTGGCTTCCTTAGT  445

seq1  TGAATGCTCTTATATTCTTGGAAAGATAAAAGCAAAACTGCCCCAACCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTCTTATATTCTTGGAAAGATAAAAGCAAAACTGCCCCAACCTT  495

seq1  TGTAGTGATATGTATAGTAAAGCCTTTGTGTGTGGGTTTGAGTGAAATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGATATGTATAGTAAAGCCTTTGTGTGTGGGTTTGAGTGAAATAT  545

seq1  TTCAGCAAAGCCTTTGTTGTGTGTGGGTCTATCAGTAGAAACTGAGAACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAGCCTTTGTTGTGTGTGGGTCTATCAGTAGAAACTGAGAACT  595

seq1  TGTTTTGATACTTTTTGAACCTCGAAGAAATGTTGGTTCTCTATAGAATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATACTTTTTGAACCTCGAAGAAATGTTGGTTCTCTATAGAATC  645

seq1  TGTACTTGGTGCTATTTGAGAACTTCAACTACACCAACCTTGGTTCTGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGGTGCTATTTGAGAACTTCAACTACACCAACCTTGGTTCTGTG  695

seq1  ACACTCCTGGAAAACATGGTGTTCTTACTTTTGATAGACTTCTCAAGGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTGGAAAACATGGTGTTCTTACTTTTGATAGACTTCTCAAGGTG  745

seq1  AGAGGACTGAGTTAGCCAGAACCAGGCTAACTCCAGGCTGAAACTGGCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACTGAGTTAGCCAGAACCAGGCTAACTCCAGGCTGAAACTGGCAA  795

seq1  TTTAGGAGACTAGGTCTGAGCTTTCTTTTTCTTTTTTCTTTTTTTCTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGACTAGGTCTGAGCTTTCTTTTTCTTTTTTCTTTTTTTCTTTT  845

seq1  CTTTTCTTTTTTCGAGACAGGGTTTCTCTGTATAACCCTGACTGTCCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTTTCGAGACAGGGTTTCTCTGTATAACCCTGACTGTCCTGG  895

seq1  AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCT  945

seq1  CTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCAACGCTGCCCGGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCAACGCTGCCCGGCTG  995

seq1  GTCTGAGTTTTCTTTTGCCAGAACTGAAGAATTC  1032
      ||||||||||||||||||||||||||||||||||
seq2  GTCTGAGTTTTCTTTTGCCAGAACTGAAGAATTC  1029