BAC Information

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BAC

Clone NameB6Ng01-019P12
Chromosome8 (Build37)
Map Location 100,788,531 - 100,895,926
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC546090, LOC636859, EG384885, LOC100041173, EG636915
Downstream geneCdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019P12.bB6Ng01-019P12.g
ACCDH852900DH852901
length1,0221,107
definitionDH852900|Mus musculus domesticus DNA, BAC clone: B6Ng01-019P12, 5' end.DH852901|Mus musculus domesticus DNA, BAC clone: B6Ng01-019P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,895,321 - 100,895,926)(100,788,531 - 100,789,256)
sequence
gaattctacagttccagggtgtggccatgatgccaggactactttctatt
gccaggagaaacttgctctaagtttttcaaccaagacacccaaagcgcta
agacatataaagcatctgagatggaagctgtcttctaaaacatcaaagaa
gcagaggtatgcataacctaacactgctacgaaattggccctagagcttt
gcaaacccacctgcagaaagaagaaatttgccttgcacaacaagaacaga
aacaaaacaacaaaacaaacaaaaacaaaaaacaaacaaacaacaaattg
ctgatgtgcaaatcccagtgtggaagtaaacaacagcaaagacacacaac
caaaatcaataaacatacttctccaaatagtaaaaacccttcctcactcc
tcaattattgctcctccatttccccatttgctcctttatgtctcttgtat
tctattttcttgtctagacaccacttcctgtacatttcaatgttctgagt
actgaatggtattccatagtgtatacataccacagttgcattattcctat
caatgtaaagacatttagggtgtgcttacttcctagctatggtgaacata
gcaaggactggttaagctagtatgtttgcagcaggatatcaagttatttg
ggcatatgcacacctgatttttgacataaatagcaacaatgggcataaag
aaattgacggcatagtcagcaaatggtttttggatctagataactacatg
gacaatgaaagatcctgctgcacaaaagtcaacataaaatgaatcaagga
acccaacataaaaccttttatactgaactgaatgtaagcaaaagtaagga
atatggctgaactctttgatacaagaaaggaatttgtaacaggcctcaag
aatatgagctttaagaccagcagtcaatgtgacttcatataacgtaaggg
tttctatactggaaggcataatcattcagaaagaagcctagagactggaa
atatctttactgactatatcta
gaattcttccttttgtacatatttaccaatgaagtctcacagacaacctc
cctccaaaaatcataagctattgaaatttgtctttggtctcctctataaa
tgagctgtaagaacatattgctgaaggtaccatatgcttgagtcatagac
cgtgatgaaataatgatgctatagtatggaaggttcatccatagtggcta
gcttttatatttctggaaggaactctgtaaactattgaaggaaaaggtaa
ctgcaaatcatattgacctttgaatcttgcaggttacaacagtggctaga
ctggaaaagcttgcccaatcgtgtagtagtgacagaaacatcttgggaga
aacaagacactttctgattagatttagcatcttatccacagaagaatgcc
acgcttgtcactattttggggccaagaacctataggaagacaagatatag
gcactatggcaccacctaactttattatgtttttagatggacataatact
aaaatgactatgtaggagttattattattatcaacatctctgaactataa
tcagtgaagcttctagctcccatagatgatgaattatatagagagctaaa
aatggcaaagaaaaagactactaaatgctttcccctgaagggaaagtgca
tgcatacagctctctaaaggctccagggtcgttgcagaagatgtgaagca
aatactgtaagaaccaaagccagaggatgtctcagaaaactcacagcaac
tgcaatattatgaaaagccctaaagaagccctagcaagaccaaactcaac
catcagaaaggaaattttgaacaaggttacactcttagttgtggagctag
tgacaattgttagctgttaacagaggaagagcgtagtacctattttaata
aactacactatagtgaaagaccatacgaagatatttgtatagaaagatat
tttatgagaggtttgcttttaagaccagagagtagtgagaggatagatcc
taggaagagttggaaagtaattatgatcataccattgtttaaacctcaaa
acctctaaatggagcctatggtttctaagaaattcattccagacctcatt
taatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100895321_100895926
seq2: B6Ng01-019P12.b_44_649 (reverse)

seq1  CCTTGCTATGTTCACCATAGCTAGGAAGTAAGCACACCCTAAATGTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTATGTTCACCATAGCTAGGAAGTAAGCACACCCTAAATGTCTTT  50

seq1  ACATTGATAGGAATAATGCAACTGTGGTATGTATACACTATGGAATACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGATAGGAATAATGCAACTGTGGTATGTATACACTATGGAATACCA  100

seq1  TTCAGTACTCAGAACATTGAAATGTACAGGAAGTGGTGTCTAGACAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTACTCAGAACATTGAAATGTACAGGAAGTGGTGTCTAGACAAGAA  150

seq1  AATAGAATACAAGAGACATAAAGGAGCAAATGGGGAAATGGAGGAGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATACAAGAGACATAAAGGAGCAAATGGGGAAATGGAGGAGCAAT  200

seq1  AATTGAGGAGTGAGGAAGGGTTTTTACTATTTGGAGAAGTATGTTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGGAGTGAGGAAGGGTTTTTACTATTTGGAGAAGTATGTTTATTG  250

seq1  ATTTTGGTTGTGTGTCTTTGCTGTTGTTTACTTCCACACTGGGATTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTGTGTGTCTTTGCTGTTGTTTACTTCCACACTGGGATTTGCA  300

seq1  CATCAGCAATTTGTTGTTTGTTTGTTTTTTGTTTTTGTTTGTTTTGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCAATTTGTTGTTTGTTTGTTTTTTGTTTTTGTTTGTTTTGTTGT  350

seq1  TTTGTTTCTGTTCTTGTTGTGCAAGGCAAATTTCTTCTTTCTGCAGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCTGTTCTTGTTGTGCAAGGCAAATTTCTTCTTTCTGCAGGTGG  400

seq1  GTTTGCAAAGCTCTAGGGCCAATTTCGTAGCAGTGTTAGGTTATGCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAAAGCTCTAGGGCCAATTTCGTAGCAGTGTTAGGTTATGCATAC  450

seq1  CTCTGCTTCTTTGATGTTTTAGAAGACAGCTTCCATCTCAGATGCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCTTTGATGTTTTAGAAGACAGCTTCCATCTCAGATGCTTTAT  500

seq1  ATGTCTTAGCGCTTTGGGTGTCTTGGTTGAAAAACTTAGAGCAAGTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAGCGCTTTGGGTGTCTTGGTTGAAAAACTTAGAGCAAGTTTCT  550

seq1  CCTGGCAATAGAAAGTAGTCCTGGCATCATGGCCACACCCTGGAACTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAATAGAAAGTAGTCCTGGCATCATGGCCACACCCTGGAACTGTA  600

seq1  GAATTC  606
      ||||||
seq2  GAATTC  606

seq1: chr8_100788531_100789256
seq2: B6Ng01-019P12.g_452_1174

seq1  TCCACAGAAGAATGCCACGCTTGTCACTATTTTGGGGCCAAGAACCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGAAGAATGCCACGCTTGTCACTATTTTGGGGCCAAGAACCTATA  50

seq1  GGAAGACAAGATATAGGCACTATGGCACCACCTAACTTTATTATGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAAGATATAGGCACTATGGCACCACCTAACTTTATTATGTTTTT  100

seq1  AGATGGACATAATACTAAAATGACTATGTAGGAGTTATTATTATTATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACATAATACTAAAATGACTATGTAGGAGTTATTATTATTATCAA  150

seq1  CATCTCTGAACTATAATCAGTGAAGCTTCTAGCTCCCATAGATGATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGAACTATAATCAGTGAAGCTTCTAGCTCCCATAGATGATGAAT  200

seq1  TATATAGAGAGCTAAAAATGGCAAAGAAAAAGACTACTAAATGCTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGAGAGCTAAAAATGGCAAAGAAAAAGACTACTAAATGCTTTCCC  250

seq1  CTGAAGGGAAAGTGCATGCATACAGCTCTCTAAAGGCTCCAGGGTCGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGAAAGTGCATGCATACAGCTCTCTAAAGGCTCCAGGGTCGTTG  300

seq1  CAGAAGATGTGAAGCAAATACTGTAAGAACCAAAGCCAGAGGATGTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGATGTGAAGCAAATACTGTAAGAACCAAAGCCAGAGGATGTCTCA  350

seq1  GAAAACTCACAGCAACTGCAATATTATGAAAAGCCCTAAAGAAGCCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCACAGCAACTGCAATATTATGAAAAGCCCTAAAGAAGCCCTAG  400

seq1  CAAGACCAAACTCAACCATCAGAAAGGAAATTTTGAACAAGGTTACACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCAAACTCAACCATCAGAAAGGAAATTTTGAACAAGGTTACACTC  450

seq1  TTAGTTGTGGAGCTAGTGACAATTGTTAGCTGTTAACAGAGGAAGAGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGTGGAGCTAGTGACAATTGTTAGCTGTTAACAGAGGAAGAGCGT  500

seq1  AGTACCTATTTAAATAAACTACACTATAGTGAAAGACCATACGAAGAATA  550
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  AGTACCTATTTTAATAAACTACACTATAGTGAAAGACCATACGAAG-ATA  549

seq1  TTTGTATAGAAAGATAATTTTATTGAGAGGTTTGCTTTTAAGACACAGAG  600
      ||||||||||||||| |||||| ||||||||||||||||||||| |||||
seq2  TTTGTATAGAAAGAT-ATTTTA-TGAGAGGTTTGCTTTTAAGAC-CAGAG  596

seq1  AGTAGTGAGAGGATAGAT-CTAGGAAGAGTTGGAAAAGTAAATATGATCA  649
      |||||||||||||||||| |||||||||||||| ||||||| ||||||| 
seq2  AGTAGTGAGAGGATAGATCCTAGGAAGAGTTGG-AAAGTAATTATGATC-  644

seq1  ATACACATTGTATAAAACTCAAAA-CTCTAAAT-GAGCTAATGTTTTCAT  697
      |||| |||||| |||| ||||||| |||||||| ||||  ||| ||||  
seq2  ATAC-CATTGTTTAAACCTCAAAACCTCTAAATGGAGCCTATGGTTTCTA  693

seq1  AGAAATTCATTTCAGA-CTCATTTAATATT  726
      ||||||||||| |||| |||||||||||||
seq2  AGAAATTCATTCCAGACCTCATTTAATATT  723