BAC Information

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BAC

Clone NameB6Ng01-020C16
Chromosome8 (Build37)
Map Location 10,036,081 - 10,223,832
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020C16.bB6Ng01-020C16.g
ACCDH853043DH853044
length1,087936
definitionDH853043|Mus musculus domesticus DNA, BAC clone: B6Ng01-020C16, 5' end.DH853044|Mus musculus domesticus DNA, BAC clone: B6Ng01-020C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,222,725 - 10,223,832)(10,036,081 - 10,036,979)
sequence
gaattcacagcaacctccaggaagcacatgatttttttttttctttttat
gccattgagtaggatttgagctcattccattccctctcacattccaggca
cgtttactaaacaccatccctgtgcctgctgctattctctgcatggtcca
agcccatcttaaacattacaagaccatggcctgagactggaactggaatg
agggcacctcttttcccacacagctatggactataaatacctacacagaa
ggcaaaggaatccaggcagtttgcttcaatctttcaattgttcagacaca
ggcttcctgtgagggtctgaaagcagaacaccatgcaacaagcagtttca
tgagctaatgttatagagtaaggtgggtgagcccctttgagctgcataag
aaatccacatacatccttagcactgctgactttcctggatgtaggaagtc
tagtcacagttaaaggtcaccttcgaaaccaatgagaaggcaacaaaaag
cctcaaactaccagtaaagtgaaggggtcttaaaaatacattttcctcct
gtggagagaaaattctattttggtttgccttatcaatttgaaattgagtt
tttaagataatggaaacatgaaatcttttcagaccaggaactgcaaataa
gaattttcccaggctcgtgttaatcattaaagtatcagtataagggatat
atttattccttatcagcatgcagtaaaacaacagaatgaaaaagttctgg
ctcaaggatccttaacgttttctaaaagctctggggattcagcactatca
caatgtagttttgcttttgcctacacagccactccaatgtttgttctaca
cagagtcccacctttacaccttaccataataatgactttgctgtcatggc
tatctgtgaccctcttttgatcccgcagtgactagcacatgctactgtaa
atgtctgcagattagagacatgatgttatcagcagcagggcatcacgact
ttttgcctcagcttttgtgagggtcaattgcaatcccagagcttttaaga
atatcgaattgagggactcccaacaaacaagctgtct
gaattcactcatttttttggatcataggtgtattttgtggtaacttccgg
tggttttataaaatggtattgtagatacagctgatctgcacacaggtcac
taacgagaagctgtagccactcacataagctctgctttgagcgtgtgttt
gtggcagagcacacatttcctccctgttcagtatgtggctgctgctgcca
ttgcagattacgggttagattccagaaggaagcatctgccctatttgctc
cataacaggtgaggtttaagcaagcttcctaccatctgacatccagatga
agcaaatatgtgccccatgtgaggatcctgtctcataatcagtagggctg
gggggaggagaagcattgtctcaggagagtggctagtgacctccctagct
ctactgctatggctgattgccaaataaaagcaccatgccttctgaccatt
gccaacaccgtttggtctgccaacatccacttttggtatttctctataca
actctaactttgaaaaatcaggtgagaagcatttcaaatgaaataacaag
tgttggggcactaatggtaaagtctggatattttgtacctctccaaggaa
tctattaacgtctacgagttatcattactactcagagagtaaaggtcaac
taaaaacactggattttaacaggagtgtttggggaaataacccagcaata
gtgtgagatgtcagacccttctttagtttctctggaacctgcacactgat
ttccagtttctctctcagtttctagacatttctgcccctggcagtatgag
tcccccctggccacatccctgatccacttgcttaaacccctgcctagagg
acatattcattggctagagtaaatgtatctcactgcgttctctagcattt
ctcggttactgagaagtgaattggtcctgtggttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10222725_10223832
seq2: B6Ng01-020C16.b_36_1122 (reverse)

seq1  AGACAGCTTGTTTTGTTGAGAGGTCCCTCTAATATTCTGAATATTCTCTA  50
      |||||||||| ||||||| || ||||||| |||    |  ||||||| ||
seq2  AGACAGCTTG-TTTGTTGGGA-GTCCCTC-AAT----TCGATATTCT-TA  42

seq1  AAAGCTCTGGGGATTTCAATTGACCCCTCACAAAAGCTGAGGCAAAAAGT  100
      |||||||| |||||| ||||||| ||||||||||||||||||||||||| 
seq2  AAAGCTCT-GGGATTGCAATTGA-CCCTCACAAAAGCTGAGGCAAAAAG-  89

seq1  TGGTGATGCCCTTGCTGCTGATAAAATTCATTGTCTTTTATTCTGCAGAC  150
      | ||||||||| |||||||||||| | ||| |||| | || |||||||||
seq2  TCGTGATGCCC-TGCTGCTGATAACA-TCA-TGTC-TCTAATCTGCAGAC  135

seq1  ATTTACCAGTAGCCATGTGCTAGGCACTGTGGGATCAAAAGAGGGTCACA  200
      ||||| |||||| |||||||||| ||||| ||||||||||||||||||||
seq2  ATTTA-CAGTAG-CATGTGCTAGTCACTGCGGGATCAAAAGAGGGTCACA  183

seq1  GATAGCCATGACAGCAAAGTAATTATTAATGGTAAGGTGTTAAGGTGGGA  250
      |||||||||||||||||||| |||||| |||||||||||| |||||||||
seq2  GATAGCCATGACAGCAAAGTCATTATT-ATGGTAAGGTGTAAAGGTGGGA  232

seq1  CTCTGTGTAGAACAAACATTGGAGTGGCTGTGTAGGCAAAAGCAAAGCTA  300
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCTGTGTAGAACAAACATTGGAGTGGCTGTGTAGGCAAAAGCAAAACTA  282

seq1  CATTGTGATAGTGCCTGAATCCCCAGAGCTTTTAGAAAACGTTAAGGATC  350
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATTGTGATAGTG-CTGAATCCCCAGAGCTTTTAGAAAACGTTAAGGATC  331

seq1  CTCTGAGCCAGAACTTTTTCATTCTTGTTGTTTTACTGCATGCTGATAAG  400
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CT-TGAGCCAGAACTTTTTCATTC-TGTTGTTTTACTGCATGCTGATAAG  379

seq1  GAATAAATATATCCCTTATACTGATACTTTAATGATTAACACGAGACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAATAAATATATCCCTTATACTGATACTTTAATGATTAACACGAGCCTGG  429

seq1  GAAAATTCTTATTTGCAGTTCCTGGTCTGAAAAGATTTCATGTTTCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTCTTATTTGCAGTTCCTGGTCTGAAAAGATTTCATGTTTCCATT  479

seq1  ATCTTAAAAACTCAATTTCAAATTGATAAGGCAAACCAAAATAGAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAAACTCAATTTCAAATTGATAAGGCAAACCAAAATAGAATTTT  529

seq1  CTCTCCACAGGAGGAAAATGTATTTTTAAGACCCCTTCACTTTACTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACAGGAGGAAAATGTATTTTTAAGACCCCTTCACTTTACTGGTA  579

seq1  GTTTGAGGCTTTTTGTTGCCTTCTCATTGGTTTTGAAGGTGACCTTTAAC  650
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTTGAGGCTTTTTGTTGCCTTCTCATTGGTTTCGAAGGTGACCTTTAAC  629

seq1  TGTGACTAGACTTCCTACATCCAGGAAAGTCAGCAGTGCTAAGGATGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTAGACTTCCTACATCCAGGAAAGTCAGCAGTGCTAAGGATGTAT  679

seq1  GTGGATTTCTTATGCAGCTCAAAGGGGCTCACCCACCTTACTCTATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTCTTATGCAGCTCAAAGGGGCTCACCCACCTTACTCTATAACA  729

seq1  TTAGCTCATGAAACTGCTTGTTGCATGGTGTTCTGCTTTCAGACCCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATGAAACTGCTTGTTGCATGGTGTTCTGCTTTCAGACCCTCAC  779

seq1  AGGAAGCCTGTGTCTGAACAATTGAAAGATTGAAGCAAACTGCCTGGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCTGTGTCTGAACAATTGAAAGATTGAAGCAAACTGCCTGGATT  829

seq1  CCTTTGCCTTCTGTGTAGGTATTTCTAGTCCATAGCTGTGTGGGAAAAGA  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCTTTGCCTTCTGTGTAGGTATTTATAGTCCATAGCTGTGTGGGAAAAGA  879

seq1  GGTGCCCTCATTCCAGTACCAGTCTCAGGCCATGGTCTTGTAATGTTTAA  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGTGCCCTCATTCCAGTTCCAGTCTCAGGCCATGGTCTTGTAATGTTTAA  929

seq1  GATGGGCTTGGACCATGCAGAGAATAGCAGCAGGCACAGGGCTGGTGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATGGGCTTGGACCATGCAGAGAATAGCAGCAGGCACAGGGATGGTGTTT  979

seq1  AGTAAACGTGCCTGGAATGTGAGAGGGAATGGAATGAGCTCAAATCCTAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACGTGCCTGGAATGTGAGAGGGAATGGAATGAGCTCAAATCCTAC  1029

seq1  TCAATGGCATAAAAAGAAAAAAAAAAATCATGTGCTTCCTGGAGGTTGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCATAAAAAGAAAAAAAAAAATCATGTGCTTCCTGGAGGTTGCT  1079

seq1  GTGAATTC  1108
      ||||||||
seq2  GTGAATTC  1087

seq1: chr8_10036081_10036979
seq2: B6Ng01-020C16.g_65_1000

seq1  GAATTCACTCATTTTTTTGGATCATAGGTGTATTTTGTGGTAACTTCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCATTTTTTTGGATCATAGGTGTATTTTGTGGTAACTTCCGG  50

seq1  TGGTTTTATAAAATGGTATTGTAGATACAGCTGATCTGCACAGAGGTCAC  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGTTTTATAAAATGGTATTGTAGATACAGCTGATCTGCACACAGGTCAC  100

seq1  TAACGAGAAGCTGTAGCCACTCACATAAGCTCTGCTTTGAGCGTGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAGAAGCTGTAGCCACTCACATAAGCTCTGCTTTGAGCGTGTGTTT  150

seq1  GTGGCAGAGCAGAGATTTCCTCCCTGTTCAGTATGTGGCTGCTGCTGCCA  200
      ||||||||||| | ||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGAGCACACATTTCCTCCCTGTTCAGTATGTGGCTGCTGCTGCCA  200

seq1  TTGCAGATTAGGGGTTAGATTCCAGAAGGAAGCATCTGCCCTATTTGCTC  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATTACGGGTTAGATTCCAGAAGGAAGCATCTGCCCTATTTGCTC  250

seq1  CATAACAGGTGAGGTTTAAGCAAGCTTCGTAGCATCTGACATCGAGATGA  300
      |||||||||||||||||||||||||||| || ||||||||||| ||||||
seq2  CATAACAGGTGAGGTTTAAGCAAGCTTCCTACCATCTGACATCCAGATGA  300

seq1  AGCAAATATGTGCCCCATGTGAGGATCCTGTCTCAGAATCAGTAGGGCTG  350
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCAAATATGTGCCCCATGTGAGGATCCTGTCTCATAATCAGTAGGGCTG  350

seq1  GGGGGAGGAGAAGCATTGTCTCAGGAGAGTGGCTAGTGACCTCCCTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGAGAAGCATTGTCTCAGGAGAGTGGCTAGTGACCTCCCTAGCT  400

seq1  CTACTGCTATGGTTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATT  450
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTATGGCTGATTGCCAAATAAAAGCACCATGCCTTCTGACCATT  450

seq1  GCCAACACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACACCGTTTGGTCTGCCAACATCCACTTTTGGTATTTCTCTATACA  500

seq1  ACTCTAACTTTGAAAAATCAGGTGAGAAGCATTTCAGATGAAATAACAAG  550
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTCTAACTTTGAAAAATCAGGTGAGAAGCATTTCAAATGAAATAACAAG  550

seq1  TGTTGGGGCACTAATGGTAAAGTCTGGATATTTTGTACATCTCCAAGGAA  600
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTGGGGCACTAATGGTAAAGTCTGGATATTTTGTACCTCTCCAAGGAA  600

seq1  TCTATTAACGTCTACGAGTTATCATTACTACTCAGAGAGTAAAGGTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAACGTCTACGAGTTATCATTACTACTCAGAGAGTAAAGGTCAAC  650

seq1  TAAAAACACTGGATTTGAACAGGAGTGTTTGGGGAAATAACCCAGCAATA  700
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAAAACACTGGATTTTAACAGGAGTGTTTGGGGAAATAACCCAGCAATA  700

seq1  GTGTGAGATGTAAGACCCATCTTTAGTTTTCTCTGTAACCTGCACACTGA  750
      ||||||||||| |||||| ||||||| |||||||| ||||||||||||||
seq2  GTGTGAGATGTCAGACCCTTCTTTAG-TTTCTCTGGAACCTGCACACTGA  749

seq1  TTTCCAGTTTCTAGATCAGTTTCTAGACCATTTCTGCCACTGGCAGTAAG  800
      ||||||||||||   |||||||||||| |||||||||| ||||||||| |
seq2  TTTCCAGTTTCTCTCTCAGTTTCTAGA-CATTTCTGCCCCTGGCAGTATG  798

seq1  AGTTCCCCTCTGCCCACATCCCTGATACCACTTGCTGTTACCCCTGTTTT  850
      || ||||| ||| ||||||||||||| |||||||||   |||||||  | 
seq2  AG-TCCCCCCTGGCCACATCCCTGAT-CCACTTGCTTAAACCCCTGCCTA  846

seq1  GATGACAGATTAATTTGGCTAGAGTGAAATGGAATCTCACTGTGGTTCT-  899
      || |||| ||| | ||||||||||| |||| | |||||||||  ||||| 
seq2  GAGGACATATTCA-TTGGCTAGAGT-AAAT-GTATCTCACTG-CGTTCTC  892

seq1  --------------------------------------------  899
                                                  
seq2  TAGCATTTCTCGGTTACTGAGAAGTGAATTGGTCCTGTGGTTCT  936