BAC Information

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BAC

Clone NameB6Ng01-021C01
Chromosome8 (Build37)
Map Location 67,972,686 - 67,973,775
singlet/doubletsinglet
Overlap genenone
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1
Downstream geneLOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021C01.bB6Ng01-021C01.g
ACCDH853723DH853724
length1,0701,035
definitionDH853723|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C01, 5' end.DH853724|Mus musculus domesticus DNA, BAC clone: B6Ng01-021C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagagtagtggacataatatttagtatacatatttaatatata
cttatatactatactattaaattattacctattattttatatattattaa
atatatataggtgttgtactctttcataaaaataacctaagaaattaaac
ataaattgatttataataaaaataatacttcttgactggtctatgaggtt
attcataaaatattttatttatattatatacatatacataaacatacaca
tatacaaacacacagacagatagacagacagacagacagacagacacaca
cacacacacacacacacacacacacacacacacacatgcatgtgccaaat
ataaatttgaaaattttggggtgtgtgtgaaagacagatgttttctacat
ttgtcttttcttcttgggtggcaggccctttaatgagccttccctactca
gcccttattttctttccataagctattttgagacatgcataattctacat
tgtattcatactgtataatatgataagatttactggataaatctgattat
ttatattatatgtattatataaaaatatatacatgcatatatttttttca
tgtttacatgtcagaaattagactcatcttagctagctctctgcttcagt
tttcctagactataactagggctctagcaatggctgtggtctcagcagag
acttgtctatggaaaaattcactgtcaggtgcctaagtggctgaaagaat
tagtttctctagagccacaaaagaagaactttagtttttttctggttgca
accagtggtccttggggagggagagtaacatgattggggattgattgtgt
gctatgcaagcactttataaggtgaactatgttccagttcccagtgacct
ttttcaaatcttaaataggcttaaacattgggagttatacagttcacaga
aaactttaagtcgacaagttttaaagtctgctttattttgtctcttgatg
ctgtgaaaggctatttctcttgaaatgacgcaatttccttttttaaattt
ttattagatttcctatttac
gaattctcttgtttagctttgtacctcattttttaagttgggttatttgt
tttgttggtttctaatttcttacatttttttatattttgcatatgaactc
tctgttcaatatagggttgaagaacccttttcccattctgtaggggccca
ttttatcttattgacagtgctctcatgaggtcacatttattaactgttga
tcatagtgcttgagctgttggtgctctgttcaggaagttgtctcctgtgc
caatgagttcaaggttatcccccactttctcttctattatatttagtgat
tctggttttatgctgttgtctttggcccacttacacttgagttttgaaaa
ggatgataaatatggatctatttgcattcatctacatgcagacatccact
tagacaagcaccatttgttttagttgttgcattttttttctattgtatag
ttttgggttctttgtcaagattattcttgagaataatcaacagttgttta
attgcatgtaaacaccatctatgtagggaattcatgaactatactgttaa
cttagccaattattagtggttggagaggtcatagacactacaggagtacc
tgttactaccatttttctaaatcaatatagtttccaactattctataaac
ttaatcttacaccccaagagatgagtagcagaaacttcttttacacataa
ggagtatttaagagatccacactggcaaaaatgcaaaggctaagtgaatg
cagggtgcccagccccaatttgtacatttacaatacaacttttataccca
acactcaggaataattacttaagagcaagataaggaggttcagaatgtca
tctgtcaaacgtgctttttggaactacaaggatgctatacccatgaaatc
tcaacaatgtggttgactaaacactaatacttcatgtctacacaaaagca
gatgtgttttcttctgaaaaatccatctcctctataagctataaataatt
aaccatattttattattattaatgaatcctggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67972686_67973775
seq2: B6Ng01-021C01.b_44_1113

seq1  GAATTCATAGAGTAGTGGACATAATATTTAGTATACATATTTAATATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAGTAGTGGACATAATATTTAGTATACATATTTAATATATA  50

seq1  CTTATATACTATACTATTAAATTATTACCTATTATTTTATATATTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATACTATACTATTAAATTATTACCTATTATTTTATATATTATTAA  100

seq1  ATATATATAGGTGTTGTACTCTTTCATAAAAATAACCTAAGAAATTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATAGGTGTTGTACTCTTTCATAAAAATAACCTAAGAAATTAAAC  150

seq1  ATAAATTGATTTATAATAAAAATAATACTTCTTGACTGGTCTATGAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGATTTATAATAAAAATAATACTTCTTGACTGGTCTATGAGGTT  200

seq1  ATTCATAAAATATTTTATTTATATTATATACATATACATAAACATACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAATATTTTATTTATATTATATACATATACATAAACATACACA  250

seq1  TATACAAACACACAGACAGATAGACAGACAGACAGACAGACAGACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAACACACAGACAGATAGACAGACAGACAGACAGACAGACACACA  300

seq1  CACACACACACACACACACACACACACACACACACATGCATGTGCCAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATGCATGTGCCAAAT  350

seq1  ATAAATTTGAAAATTTTGGGGTGTGTGTGAAAGACAGATGTTTTCTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGAAAATTTTGGGGTGTGTGTGAAAGACAGATGTTTTCTACAT  400

seq1  TTGTCTTTTCTTCTTGGGTGGCAGGCCCTTTAATGAGCCTTCCCTACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTCTTCTTGGGTGGCAGGCCCTTTAATGAGCCTTCCCTACTCA  450

seq1  GCCCTTATTTTCTTTCCATAAGCTATTTTGAGACATGCATAATTCTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTATTTTCTTTCCATAAGCTATTTTGAGACATGCATAATTCTACAT  500

seq1  TGTATTCATACTGTATAATATGATAAGATTTACTGGATAAATCTGATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATACTGTATAATATGATAAGATTTACTGGATAAATCTGATTAT  550

seq1  TTATATTATATGTATTATATAAAAATATATACATGCATATATTTTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATATGTATTATATAAAAATATATACATGCATATATTTTTTTCA  600

seq1  TGTTTACATGTCAGAAATTAGACTCATCTTAGCTAGCTCTCTGCTTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATGTCAGAAATTAGACTCATCTTAGCTAGCTCTCTGCTTCAGT  650

seq1  TTTCCTAGACTATAACTAGGGCTCTAGCAATGGCTGTGGTCTCAGCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGACTATAACTAGGGCTCTAGCAATGGCTGTGGTCTCAGCAGAG  700

seq1  ACTTGTCTATGGAAAAATTCACTGTCAGGTGCCTAAGTGGCTGAAAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCTATGGAAAAATTCACTGTCAGGTGCCTAAGTGGCTGAAAGAAT  750

seq1  TAGTTTCTCTAGAGCCACAAAAGAAGAACTTTAGTTTTTTTCTGGTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTCTAGAGCCACAAAAGAAGAACTTTAGTTTTTTTCTGGTTGCA  800

seq1  ACCAGTGGTCCTTGGGGAGGGAGAGTAACATGATTGGGGATTGATTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGGTCCTTGGGGAGGGAGAGTAACATGATTGGGGATTGATTGTGT  850

seq1  GCTATGCAAGCACTTTATAAGGTGAACTATGTTCCAGTTCCCAGTGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGCAAGCACTTTATAAGGTGAACTATGTTCCAGTTCCCAGTGACCT  900

seq1  TTTTCAAAATCTTAAATAGGCTTAAACATTGGAAGTTATACAGTTCAACA  950
      ||||| |||||||||||||||||||||||||| ||||||||||||| |||
seq2  TTTTC-AAATCTTAAATAGGCTTAAACATTGGGAGTTATACAGTTC-ACA  948

seq1  GAAAACTTAAAGTCGACAAAGTTTTAAAAGTTCTGCTTTTATTTTGTTCT  1000
      |||||||| |||||||| ||||||||||   ||||| ||||||||| |||
seq2  GAAAACTTTAAGTCGAC-AAGTTTTAAA--GTCTGC-TTTATTTTG-TCT  993

seq1  CTTTGATGCTGTGAAAGGTCTATTGTCTCTGAAAAAGGAACGCATATTTC  1050
      | |||||||||||||||| ||||| |||||  ||| |  ||||| |||||
seq2  C-TTGATGCTGTGAAAGG-CTATT-TCTCTTGAAATG--ACGCA-ATTTC  1037

seq1  CTTTTTTTAATATTTTTTATTAGGTATTTTCCTCATTTAC  1090
      ||||||| ||   ||||||||||    |||||| ||||||
seq2  CTTTTTTAAA---TTTTTATTAG---ATTTCCT-ATTTAC  1070