BAC Information

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BAC

Clone NameB6Ng01-021D14
Chromosome8 (Build37)11 (Build37)
Map Location 45,422,012 - 45,423,16867,663,326 - 67,663,410
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021D14.bB6Ng01-021D14.g
ACCDH853789DH853790
length1,133140
definitionDH853789|Mus musculus domesticus DNA, BAC clone: B6Ng01-021D14, 5' end.DH853790|Mus musculus domesticus DNA, BAC clone: B6Ng01-021D14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(45,422,012 - 45,423,168)(67,663,326 - 67,663,410)
sequence
gaattcctttgacacatatctttaggagtttagtgtttagattctaaagg
gttccttgctggaaatgttggtttaaaggtgagccagctcaagctggaat
ggttacacttcccttggccttctcaggccaagttgtgcttgtaatgtctt
ctcacaggcccaggattctatcctcaaattcagagattctgactgagttc
aaaggaagtgagctaacagtcttggaatttacttcaggctctgagcaggt
cagagctggtgaggctggcatgtgccaagccatatcacacttccctggca
tgtcagggcatctcagtaacggcagcagcttggtaactgtaagttaccct
acaaatgccttcctactggagaacctgtggaaaacaacggtcctgaccat
aaacttttgccttaagtcaaaatatcagaactcaatttgtttttcaatag
cttctctttaactatcccattctcacccatgatggatgatgtgaccctct
cctctttgaatatgaatgtcgctgagaatttgttgtttcatagaaaaagc
atttttgattagacaggcaattctgttcatcttactgaagttggagccca
atggtttagatatttccattctctaaagccacaaacatcaagagtggtgg
ttctcaacctgtgtgtcatgacccccagcagtggagtcacatatttagat
atcttgtgtatcaatacattgcaaggtacaagaatagcacaattacaatt
atgaataatagcacaattacatggaatcacttatggttgggggtcaccac
aaccagaggaactcggttaagggtcacagctttggggatgatgagagcca
cttgtccagagcacagccatcgctctggcaattaactcaaatgcgctttg
aaggtaacatgtgacagaacttaagactttcattaagtccttgttgacac
tcaagaaatcctcactgttatgttacttcatgcccttagtacaataattt
aagaaagaatgtatcaactaagttagccattcttgcttttcataaaagtt
tatttcttgtacaagttaagcctgcttcctcaaacctgagctgagaaagt
cacgatgctgcatacatttaaaatgtgttattc
tttgtttagctttgtaccccatagggttatttgatttcctggagtccatc
ttcttgagttcctcatatgtatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45422012_45423168
seq2: B6Ng01-021D14.b_41_1173 (reverse)

seq1  GAATAACATATTTTAAAATGTATGCATGCCATCGTTGGACCTTTCTCAGC  50
      |||||||| ||||| |||||||||||   ||||||  || ||||||||||
seq2  GAATAACACATTTT-AAATGTATGCA--GCATCGT--GA-CTTTCTCAGC  44

seq1  TCAGGTTTTGAAGGAAGCAAGCATAAACTTGATACAAGAAATATAAACTT  100
      ||||||||   |||||||| || | |||||| ||||||||  ||||||||
seq2  TCAGGTTT--GAGGAAGCAGGC-TTAACTTG-TACAAGAA--ATAAACTT  88

seq1  TTATGACAAAAGCCAAGAATGGCCTAACTTAGTTTGATTACATTCTTTCT  150
      |||||  ||||| ||||||||| ||||||||| |||| ||||||||||||
seq2  TTATG--AAAAG-CAAGAATGG-CTAACTTAG-TTGA-TACATTCTTTCT  132

seq1  TAAAATATTTGTAACTAAGGGCATGAAGTAACCTTAACAGTGAGGATTTC  200
      |||| || |||| |||||||||||||||||| | ||||||||||||||||
seq2  TAAATTA-TTGT-ACTAAGGGCATGAAGTAA-CATAACAGTGAGGATTTC  179

seq1  TTTGAGTGATCAAC-AGGACTTAATGAAAGTCTTAAGTTCTGTCACATGT  249
       ||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  -TTGAGTG-TCAACAAGGACTTAATGAAAGTCTTAAGTTCTGTCACATGT  227

seq1  TACCTTCAAAGCGCATTTTGAGTTAATTGCCAGAGCGATGGCTGTGCTCT  299
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TACCTTCAAAGCGCA-TTTGAGTTAATTGCCAGAGCGATGGCTGTGCTCT  276

seq1  GGACCAGTGGCTCTCATCATCCCCAAAGCTGTGACCCTTTAACCGAGTTC  349
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGACAAGTGGCTCTCATCATCCCCAAAGCTGTGACCC-TTAACCGAGTTC  325

seq1  CTCTGGTTGTGGTGACCCCCAACCATAAGTGATTCCATTGTAATTGTGCT  399
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTCTGGTTGTGGTGACCCCCAACCATAAGTGATTCCA-TGTAATTGTGCT  374

seq1  ATTATTCATAATTGTAATTGTGCTATTCTTGTACCTTGCAATGTATTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATAATTGTAATTGTGCTATTCTTGTACCTTGCAATGTATTGAT  424

seq1  ACACAAGATATCT-AATATGTGACTCCACTGCTGGGGGTCATGACACACA  498
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACACAAGATATCTAAATATGTGACTCCACTGCTGGGGGTCATGACACACA  474

seq1  GGTTGAGAACCACCACTCTTGATGTTTGTGGCTTTAGAGAATGGAAATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGAACCACCACTCTTGATGTTTGTGGCTTTAGAGAATGGAAATAT  524

seq1  CTAAACCATTGGGCTCCAACTTCAGTAAGATGAACAGAATTGCCTGTCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCATTGGGCTCCAACTTCAGTAAGATGAACAGAATTGCCTGTCTA  574

seq1  ATCAAAAATGCTTTTTCTATGAAACAACAAATTCTCAGCGACATTCATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAATGCTTTTTCTATGAAACAACAAATTCTCAGCGACATTCATAT  624

seq1  TCAAAGAGGAGAGGGTCACATCATCCATCATGGGTGAGAATGGGATAGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGGAGAGGGTCACATCATCCATCATGGGTGAGAATGGGATAGTT  674

seq1  AAAGAGAAGCTATTGAAAAACAAATTGAGTTCTGATATTTTGACTTAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGCTATTGAAAAACAAATTGAGTTCTGATATTTTGACTTAAGG  724

seq1  CAAAAGTTTATGGTCAGGACCGTTGTTTTCCACAGGTTCTCCAGTAGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTTATGGTCAGGACCGTTGTTTTCCACAGGTTCTCCAGTAGGAA  774

seq1  GGCATTTGTAGGGTAACTTACAGTTACCAAGCTGCTGCCGTTACTGAGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTGTAGGGTAACTTACAGTTACCAAGCTGCTGCCGTTACTGAGAT  824

seq1  GCCCTGACATGCCAGGGAAGTGTGATATGGCTTGGCACATGCCAGCCTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGACATGCCAGGGAAGTGTGATATGGCTTGGCACATGCCAGCCTCA  874

seq1  CCAGCTCTGACCTGCTCAGAGCCTGAAGTAAATTCCAAGACTGTTAGCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTGACCTGCTCAGAGCCTGAAGTAAATTCCAAGACTGTTAGCTC  924

seq1  ACTTCCTTTGAACTCAGTCAGAATCTCTGAATTTGAGGATAGAATCCTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTTGAACTCAGTCAGAATCTCTGAATTTGAGGATAGAATCCTGG  974

seq1  GCCTGTGAGAAGACATTACAAGCACAACTTGGCCTGAGAAGGCCAAGGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAGAAGACATTACAAGCACAACTTGGCCTGAGAAGGCCAAGGGA  1024

seq1  AGTGTAACCATTCCAGCTTGAGCTGGCTCACCTTTAAACCAACATTTCCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAACCATTCCAGCTTGAGCTGGCTCACCTTTAAACCAACATTTCCA  1074

seq1  GCAAGGAACCCTTTAGAATCTAAACACTAAACTCCTAAAGATATGTGTCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAACCCTTTAGAATCTAAACACTAAACTCCTAAAGATATGTGTCA  1124

seq1  AAGGAATTC  1157
      |||||||||
seq2  AAGGAATTC  1133

seq1: chr11_67663326_67663410
seq2: B6Ng01-021D14.g_139_209 (reverse)

seq1  TATATATATATATATATATATATATATATATATATATATATATATACACA  50
      |||||||||||||||||||||||||||||||||||||||||||||     
seq2  TATATATATATATATATATATATATATATATATATATATATATAT-----  45

seq1  CACACATACATATACATATATATATATATACATAT  85
               ||||| ||||||||||||||||||||
seq2  ---------ATATATATATATATATATATACATAT  71