BAC Information

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BAC

Clone NameB6Ng01-021J19
Chromosome8 (Build37)
Map Location 118,455,705 - 118,588,547
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox, Maf
Downstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J19.bB6Ng01-021J19.g
ACCDH854066DH854067
length1961,040
definitionDH854066|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J19, 5' end.DH854067|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,455,705 - 118,455,900)(118,587,499 - 118,588,547)
sequence
gaattcctggtggagaagaatccttgtggaatttatgtcaacataaaatt
cagatactctgcactcctccacttcatgctggttttgacaacaagatggg
ccagaacagggccagcatgacaacaagaagacatgaaagaggaagaaggc
taactctgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagag
gaattcctcccggactctgcacgtgtttttgctgttccctggaccagcga
catctccaagttctctatccctgaaccttggaaaaacatttcctccattc
caaccatgaccattgccggttaacaaactctttctcttggggctacactt
aggctacacaagtcaatgacagacagactttagggcccagtggcatatat
gggggggaccataggggcacggtgatgggtgtaaatcatactgtcaagag
aggttcagtgcatctcggaggagagacaagagacattttgtcttaccagg
ctgtggactaggtcccctgagacaggaattcccccaggttgcaaatggag
atgaagagtggtgtgtcccatcctattaaacgtgagattgtactcaaggc
atctggctctgctattcactgacagttcaaagaggcaagcaagctttccc
tccattgctgccatgtccccaagtccctggcataggacagagacacctgg
atgctttccacatttactttattgtcagaaagcaaactctgtgccctggg
agtttttttttttttttttttttttttgtttgctttgtttttcaatctca
tttcactttgttttattgtgttccaattgtcaaggtcaaggtggctggca
ttgccctcaacgatacccacaaagggatttctaccatgtatctttattcc
tcccactcacatctctttgagacatcttgtttgagatgctttaaaagctt
catgcttttcaaagtccttatctgcattaaagtattaaaacccataagca
atccaaagttttcaaatgttttctgtggggtctggagccatggaaagcct
tattggtttatccaggaagacactggacttaaggctggcgatgttgcctg
agggagcactcagcaaggtaaaaatgctgagaaccctaattgcagagcaa
ggaacctgatataatttccattcttaacttgcagatcatgaacagacaga
cgagcgaacccatcgtggggaaatcatgacggtaaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118455705_118455900
seq2: B6Ng01-021J19.b_42_237

seq1  GAATTCCTGGTGGAGAAGAATCCTTGTGGAATTTATGTCAACATAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGTGGAGAAGAATCCTTGTGGAATTTATGTCAACATAAAATT  50

seq1  CAGATACTCTGCACTCCTCCACTTCATGCTGGTTTTGACAACAAGATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTCTGCACTCCTCCACTTCATGCTGGTTTTGACAACAAGATGGG  100

seq1  CCAGAACAGGGCCAGCATGACAACAAGAAGACATGAAAGAGGAAGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACAGGGCCAGCATGACAACAAGAAGACATGAAAGAGGAAGAAGGC  150

seq1  TAACTCTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG  196

seq1: chr8_118587499_118588547
seq2: B6Ng01-021J19.g_69_1108 (reverse)

seq1  CCTCC---CCGTCCTTGATTTCCCCCACGATGGGTGTTCGCTTCGTGCTG  47
      |||||   |||| | |||||| |||||||||||  |||||| |||| |||
seq2  CCTCCTTACCGT-CATGATTT-CCCCACGATGG--GTTCGC-TCGT-CTG  44

seq1  TCTGTTCTGTGATCTGCCAAGTTAAGAATGGAAATTTTTATCTGGTTTCC  97
      |||||||  ||||||| ||||||||||||||||| || |||| ||||  |
seq2  TCTGTTC-ATGATCTG-CAAGTTAAGAATGGAAA-TTATATCAGGTT--C  89

seq1  TTTGCTCTTGCATTTGGGTTCTCAGCCTTCTTTCCCTTGCTGAGTGGCCT  147
       |||||||   ||| ||||||||||| || ||| ||||||||||||  ||
seq2  CTTGCTCTGCAATTAGGGTTCTCAGCATT-TTTACCTTGCTGAGTG--CT  136

seq1  CCCTCAGGC-ACATCGCCAGCC-TAAGTCCAGTGTCTTCCTGGATAAA-C  194
      ||||||||| |||||||||||| ||||||||||||||||||||||||| |
seq2  CCCTCAGGCAACATCGCCAGCCTTAAGTCCAGTGTCTTCCTGGATAAACC  186

seq1  AATAAGGCTTTTCATGGCTCCAGA-CCCACAGAAAACATTTGAAAACTTT  243
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  AATAAGGCTTTCCATGGCTCCAGACCCCACAGAAAACATTTGAAAACTTT  236

seq1  GGATTGCTTATGAGTTTTTATACTTTTAATGCAGATAAGGACTTTTGAAA  293
      |||||||||||| ||||| |||| |||||||||||||||||| |||||||
seq2  GGATTGCTTATGGGTTTTAATAC-TTTAATGCAGATAAGGAC-TTTGAAA  284

seq1  AGCATGAAGCTTTTAAAGCATCTCAAACAAGATGTCTCAAAGAGATGTGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGCTTTTAAAGCATCTCAAACAAGATGTCTCAAAGAGATGTGA  334

seq1  GTGGGAGGAATAAAGATACATGGTAGAAATCCCTTTGTGGGTATCGTTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGGAATAAAGATACATGGTAGAAATCCCTTTGTGGGTATCGTTGA  384

seq1  GGGCAATGCCAGCCACCTTGACCTTGACAATTGGAACACAATAAAACAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGCCAGCCACCTTGACCTTGACAATTGGAACACAATAAAACAAA  434

seq1  GTGAAATGAGATTGAAAAACAAAGCAAACAAAAAAAAAAAAAAAAAAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGAGATTGAAAAACAAAGCAAACAAAAAAAAAAAAAAAAAAAAA  484

seq1  AAAACTCCCAGGGCACAGAGTTTGCTTTCTGACAATAAAGTAAATGTGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCCAGGGCACAGAGTTTGCTTTCTGACAATAAAGTAAATGTGGA  534

seq1  AAGCATCCAGGTGTCTCTGTCCTATGCCAGGGACTTGGGGACATGGCAGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCCAGGTGTCTCTGTCCTATGCCAGGGACTTGGGGACATGGCAGC  584

seq1  AATGGAGGGAAAGCTTGCTTGCCTCTTTGAACTGTCAGTGAATAGCAGAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGGAAAGCTTGCTTGCCTCTTTGAACTGTCAGTGAATAGCAGAG  634

seq1  CCAGATGCCTTGAGTACAATCTCACGTTTAATAGGATGGGACACACCACT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCCTTGAGTACAATCTCACGTTTAATAGGATGGGACACACCACT  684

seq1  CTTCATCTCCATTTGCAACCTGGGGGAATTCCTGTCTCAGGGGACCTAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTCCATTTGCAACCTGGGGGAATTCCTGTCTCAGGGGACCTAGT  734

seq1  CCACAGCCTGGTAAGACAAAATGTCTCTTGTCTCTCCTCCGAGATGCACT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCTGGTAAGACAAAATGTCTCTTGTCTCTCCTCCGAGATGCACT  784

seq1  GAACCTCTCTTGACAGTATGATTTACACCCATCACCGTGCCCCTATGGTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTCTTGACAGTATGATTTACACCCATCACCGTGCCCCTATGGTC  834

seq1  CCCCCCATATATGCCACTGGGCCCTAAAGTCTGTCTGTCATTGACTTGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCATATATGCCACTGGGCCCTAAAGTCTGTCTGTCATTGACTTGTG  884

seq1  TAGCCTAAGTGTAGCCCCAAGAGAAAGAGTTTGTTAACCGGCAATGGTCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAAGTGTAGCCCCAAGAGAAAGAGTTTGTTAACCGGCAATGGTCA  934

seq1  TGGTTGGAATGGAGGAAATGTTTTTCCAAGGTTCAGGGATAGAGAACTTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGAATGGAGGAAATGTTTTTCCAAGGTTCAGGGATAGAGAACTTG  984

seq1  GAGATGTCGCTGGTCCAGGGAACAGCAAAAACACGTGCAGAGTCCGGGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCGCTGGTCCAGGGAACAGCAAAAACACGTGCAGAGTCCGGGAG  1034

seq1  GAATTC  1049
      ||||||
seq2  GAATTC  1040