BAC Information

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BAC

Clone NameB6Ng01-021K12
Chromosome8 (Build37)
Map Location 52,330,451 - 52,485,302
singlet/doubletdoublet
Overlap geneLOC667517
Upstream geneLOC100039954, LOC100039966
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021K12.bB6Ng01-021K12.g
ACCDH854098DH854099
length1,077944
definitionDH854098|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K12, 5' end.DH854099|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,330,451 - 52,331,547)(52,484,781 - 52,485,302)
sequence
gaattcaaattctcagaagtatcagatttgaaggtaatcatatttactat
ggtgtagacaggcatatcattaaagaacagatgctgatctttactctaca
attgttgcttcaaaagccctagtatggatatggtctaaaataattctact
gctaacattgtctcagccctataggtagtatggtaaattatgttttatca
cttgagtaattgtaacaggctttggcgggaaaagttcaatacctttattg
atgatttagatagaacttggtagaaataaattgttatgatttagactttt
aaccttattatatcgaaattactgtttatttgttttgaaatggtgataaa
tattcttttgctttttaactacttaaaacaattcacaaatttaaataaaa
tttgatcatattcttccccttaccaacttcatccaaaacttttcttcctt
ccgttcctttttattatttctctgcagaaaaaaaaagttaaaaacccaaa
tacaatcaccaattggtcaaaaccttgaaaatgcatcactcaaaaaggaa
aaattacaaaaagaaacatcaacaacccccaccaaactgtacaaactgtg
gccaaatacaagcacacagaaaagttatcaagcccattatctgttgttca
attactcattactcccaaacataagctctgtcctggaaaggttgatatac
ccagtgtcattccattgcagaaaatggattttccctctctcaccagatat
aaatgacagcaccaccaccgattgttaacctttattctagtagataggtt
gactctcaattttcattcatttctaaaacatagtaaaataaaatataaga
tgaagcaaaagtgatcacactcaagtctgacaatgcagaccaacaaatta
aaaagagcccaagactctttgactctttccccattgttagcacactctga
tatcgcaatatcactatactggaagacttaatatagcacagtacacatac
ttactagctgtctttcatatgctatgcttctgcaagacctctaatttaac
tactttgttactagtttcaagcatagt
gaattctcatggattaagactaggctttgatttgaatttccctgattatt
taggaatttgaatatttctttaagtgcttttcagccatttgatactactc
tgttgagaattctttcttttctttttaaattttattggttattgtattta
tttacatttcaaatgctattctccttcccatttaaaccacctattacacc
tctgtcccccagcttctatgagggcattcccccacacaccaacccttcct
cctcagcaccctagagaattctttatttagctctctacctcattatttaa
ttgggttacttgagttgtttatatctaacttcttgagttccttataattt
ttggatattatacttctggcagatatagagttgaagattcatttccaatc
tgtaggctgtaattttctgctattgacagtgtcctttgccttacagaagc
ttttcagtttcaagaggtcccaattatctactgacttttttggagcctga
gccataggtgttctgtttgggacatgatctcttataccaatgaggtcaag
gctgttccccactttcagttctattaggtttaatgtgtctggtttcaagt
tgaggtattagatccctttagacttgagttttgagcagggtaataattat
ggatctatttgcatttttctaaatgcagacatatagttagaccagcaact
ttgttgaacatgctctttttttgtatggtttttccttctttttcaaaatc
aagaacccataggtgtgtaggtttatgtgagggtctttgactcaattaca
ttgatcaacctgtctgttcctataccaataccatgcatttttattacctg
cagtataccttgaaggaagggatggtgatcccctagaagttcatttatca
agtaggatgttttttctatactgggttctgtttcccatacgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52330451_52331547
seq2: B6Ng01-021K12.b_43_1119

seq1  GAATTCAAATTCTCAGAAGTATCAGATTTGAAGGTAATCATATTTACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTCTCAGAAGTATCAGATTTGAAGGTAATCATATTTACTAT  50

seq1  GGTGTAGACAGGCATATCATTAAAGAACAGATGCTGATCTTTACTCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGACAGGCATATCATTAAAGAACAGATGCTGATCTTTACTCTACA  100

seq1  ATTGTTGCTTCAAAAGCCCTAGTATGGATATGGTCTAAAATAATTCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGCTTCAAAAGCCCTAGTATGGATATGGTCTAAAATAATTCTACT  150

seq1  GCTAACATTGTCTCAGCCCTATAGGTAGTATGGTAAATTATGTTTTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACATTGTCTCAGCCCTATAGGTAGTATGGTAAATTATGTTTTATCA  200

seq1  CTTGAGTAATTGTAACAGGCTTTGGCGGGAAAAGTTCAATACCTTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTAATTGTAACAGGCTTTGGCGGGAAAAGTTCAATACCTTTATTG  250

seq1  ATGATTTAGATAGAACTTGGTAGAAATAAATTGTTATGATTTAGACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTAGATAGAACTTGGTAGAAATAAATTGTTATGATTTAGACTTTT  300

seq1  AACCTTATTATATCGAAATTACTGTTTATTTGTTTTGAAATGGTGATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTATTATATCGAAATTACTGTTTATTTGTTTTGAAATGGTGATAAA  350

seq1  TATTCTTTTGCTTTTTAACTACTTAAAACAATTCACAAATTTAAATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTGCTTTTTAACTACTTAAAACAATTCACAAATTTAAATAAAA  400

seq1  TTTGATCATATTCTTCCCCTTACCAACTTCATCCAAAACTTTTCTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATATTCTTCCCCTTACCAACTTCATCCAAAACTTTTCTTCCTT  450

seq1  CCGTTCCTTTTTATTATTTCTCTGCAGAAAAAAAAAGTTAAAAACCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCCTTTTTATTATTTCTCTGCAGAAAAAAAAAGTTAAAAACCCAAA  500

seq1  TACAATCACCAATTGGTCAAAACCTTGAAAATGCATCACTCAAAAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCACCAATTGGTCAAAACCTTGAAAATGCATCACTCAAAAAGGAA  550

seq1  AAATTACAAAAAGAAACATCAACAACCCCCACCAAACTGTACAAACTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACAAAAAGAAACATCAACAACCCCCACCAAACTGTACAAACTGTG  600

seq1  GCCAAATACAAGCACACAGAAAAGTTATCAAGCCCATTATCTGTTGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATACAAGCACACAGAAAAGTTATCAAGCCCATTATCTGTTGTTCA  650

seq1  ATTACTCATTACTCCCAAACATAAGCTCTGTCCTGGAAAGGTTGATATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCATTACTCCCAAACATAAGCTCTGTCCTGGAAAGGTTGATATAC  700

seq1  CCAGTGTCATTCCATTGCAGAAAATGGATTTTCCCTCTCTCACCAGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTCATTCCATTGCAGAAAATGGATTTTCCCTCTCTCACCAGATAT  750

seq1  AAATGACAGCACCACCACCGATTGTTAACCTTTATTCTAGTAGATAGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACAGCACCACCACCGATTGTTAACCTTTATTCTAGTAGATAGGTT  800

seq1  GACTCTCAATTTTCATTCATTTCTAAAACATAGTAAAATAAAATATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCAATTTTCATTCATTTCTAAAACATAGTAAAATAAAATATAAGA  850

seq1  TGAAGCAAAAGTGATCACACTCAAGTCTGACAATGCAGACCAACAAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGAAGCAAAAGTGATCACACTCAAGTCTGACAATGCAGACCAACAAATT-  899

seq1  AAAAAGAGCCCAAGACTCTTTGACTCTTTTCCCCATTGTTAGCACACTCT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAAAGAGCCCAAGACTCTTTGACTC-TTTCCCCATTGTTAGCACACTCT  948

seq1  GATATCGCAAATAATCACTATACTGGAAGACTTAATATAAGCACAGTACA  1000
      ||||||||||   ||||||||||||||||||||||||| |||||||||||
seq2  GATATCGCAA--TATCACTATACTGGAAGACTTAATAT-AGCACAGTACA  995

seq1  ACCATACTTACTAAGCCTGTTCCTTTCATATGCCTATGCTTCTTGCAAAG  1050
        |||||||||||   ||||  |||||||||| ||||||||| |||||  
seq2  --CATACTTACTA--GCTGT--CTTTCATATG-CTATGCTTC-TGCAAGA  1037

seq1  ACTCTAAATTTAAACTTACTTTGTATACTAGTTTTCAACAGCATAGT  1097
       |||| |||||||   |||||||| |||||| |||||  ||||||||
seq2  CCTCT-AATTTAA--CTACTTTGT-TACTAG-TTTCA--AGCATAGT  1077

seq1: chr8_52484781_52485302
seq2: B6Ng01-021K12.g_66_587 (reverse)

seq1  TCCCAAACAGAACACCTATGGCTCAGGCTCCAAAAAAGTCAGTAGATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACAGAACACCTATGGCTCAGGCTCCAAAAAAGTCAGTAGATAAT  50

seq1  TGGGACCTCTTGAAACTGAAAAGCTTCTGTAAGGCAAAGGACACTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTCTTGAAACTGAAAAGCTTCTGTAAGGCAAAGGACACTGTCAA  100

seq1  TAGCAGAAAATTACAGCCTACAGATTGGAAATGAATCTTCAACTCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAAAATTACAGCCTACAGATTGGAAATGAATCTTCAACTCTATAT  150

seq1  CTGCCAGAAGTATAATATCCAAAAATTATAAGGAACTCAAGAAGTTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGAAGTATAATATCCAAAAATTATAAGGAACTCAAGAAGTTAGAT  200

seq1  ATAAACAACTCAAGTAACCCAATTAAATAATGAGGTAGAGAGCTAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAACTCAAGTAACCCAATTAAATAATGAGGTAGAGAGCTAAATAA  250

seq1  AGAATTCTCTAGGGTGCTGAGGAGGAAGGGTTGGTGTGTGGGGGAATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTCTAGGGTGCTGAGGAGGAAGGGTTGGTGTGTGGGGGAATGCC  300

seq1  CTCATAGAAGCTGGGGGACAGAGGTGTAATAGGTGGTTTAAATGGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGAAGCTGGGGGACAGAGGTGTAATAGGTGGTTTAAATGGGAAGG  350

seq1  AGAATAGCATTTGAAATGTAAATAAATACAATAACCAATAAAATTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCATTTGAAATGTAAATAAATACAATAACCAATAAAATTTAAAA  400

seq1  AGAAAAGAAAGAATTCTCAACAGAGTAGTATCAAATGGCTGAAAAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAGAATTCTCAACAGAGTAGTATCAAATGGCTGAAAAGCACT  450

seq1  TAAAGAAATATTCAAATTCCTAAATAATCAGGGAAATTCAAATCAAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAATATTCAAATTCCTAAATAATCAGGGAAATTCAAATCAAAGCC  500

seq1  TAGTCTTAATCCATGAGAATTC  522
      ||||||||||||||||||||||
seq2  TAGTCTTAATCCATGAGAATTC  522