BAC Information

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BAC

Clone NameB6Ng01-021M07
ChromosomeX (Build37)8 (Build37)
Map Location 102,074,423 - 102,074,50441,748,858 - 41,749,947
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668426, LOC668430, Rnf12, C77370, Vcp-ps, EG621542, Uprt, Zdhhc15, Magee2
Downstream geneLOC622098, LOC676331, 5530601H04Rik, 2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213, LOC668458, Cypt2, EG633570, Fgf16, Atrx
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021M07.bB6Ng01-021M07.g
ACCDH854181DH854182
length9261,078
definitionDH854181|Mus musculus domesticus DNA, BAC clone: B6Ng01-021M07, 5' end.DH854182|Mus musculus domesticus DNA, BAC clone: B6Ng01-021M07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,074,423 - 102,074,504)(41,748,858 - 41,749,947)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtgtcct
ttttgtcttattgacggtgtcttttgctttgcaattttatgaggtcccat
ttattgattcttgatcttacagcacaagccattgctgttctattcaagaa
tttttcccctgtacacatatctccgaggcttttccctactttctcctcta
taagtttcactgtctctggttttatgtggagttcctcaatccacttagat
ttgaccttagtacaaggaaatagaaatggatcaattcgcattcttctaca
tgataaccgccagttgtgccagcaccatttgttgaaaatgctgtcttttt
cccactggatggttttagctcccttgtcaaagaacaagtgaccataggtg
tatggattcatctctgggtcttcaattctgttccattggtctacttgtct
gtcactataccagtaccatgcagttttaatcacaattgctctgtagtaca
gttttaggtctcacatggtgattccaccagaggttcttttatccttgaga
agagtttttgctatcctcgcttttttgttattccagatgaatctgccaat
tgccctttctaattcgttgaagaattgagttggaattttgatggggattg
cattgaatctgtagattgcttttggcaagatagccatttttacaatgttg
atcctgccaatccatgagcatgggagatctttccatcttctgagatcttc
tttttcttttccattttttattaggtatttagctcatttacatttccaat
gctataccaaaagtcccccataccca
gaattccaattatggtgagccacaaaatcaattctattatcaagtatatg
ctgaccaagaaccgtataaataatgtgtaaatggctgtaataagaattga
ggtaactcttggaggtacctaactgggatgtggaatcagctagggtgctt
ggtttctagatggtctaatgaacactcagccccaaggttgcaggattttg
ttgacagtcacagatctcgagttcttccaaaagtcttatgaacattaatt
cctcacgaatatagattatcaaatctacttttgataggaactcactattt
tctagaaagtgttaaaagtgaatacacaacttgacatgatcattctgagt
caacagagttccttgtgaatgacaaactccaaccttgacaactctcctat
gaaaacacatgaagcaaagcttaataacacatgcctataactgcagtacc
aggggaactgccaatcgtgctaacttagagctagagagcaagcccaagtc
tggctttctagaaagagaaacccttgagttaaagaggcaaaagtttgagt
atttatggagaatggttccataaaggctggagaccctggtgaagctagtg
gacatgagtccaggactggggtgctaagagactattggccacattggtct
gattgctttaccatgtctgaaaggaggaatagattagcatgggaagtttt
tttttttttctacttacaaccaagtgcaattttgtttgcatttctaccca
tctttctgagaaatgaactcgaagagtctcaaagacaatacacctaagaa
caacaatgacaaaagattataaatgttataatcaaaatctcgaaacaaaa
agaatttcaaaaaagaaaagaaactatatgtttgtcaactgaccctcctg
gctccacaaaaaattatctgacagattccaataccaattcatgattcaca
gaaatgctcagttcaagagcataagatattctgtcacttcacaagaatat
ctaaacgctcttatagctacatcatacttgatgggtaagaactgctttcg
gtctagatgggaacaagatatacgctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_102074423_102074504
seq2: B6Ng01-021M07.b_888_973 (reverse)

seq1  TGGGTATGGGGGACTTTTGGCATAGCATTGGAAATGTAAATGAGCTAAAC  50
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  TGGGTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAAT  50

seq1  ACCTAATAAAAAATAGA----AAAAAAATCATCTCA  82
      |||||||||||||| ||    ||||| |  ||||||
seq2  ACCTAATAAAAAATGGAAAAGAAAAAGAAGATCTCA  86

seq1: chr8_41748858_41749947
seq2: B6Ng01-021M07.g_69_1146

seq1  GAATTCCAATTATGGTGAGCCACAAAATCAATTCTATTATCAAGTATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTATGGTGAGCCACAAAATCAATTCTATTATCAAGTATATG  50

seq1  CTGACCAAGAACCGTATAAATAATGTGTAAATGGCTGTAATAAGAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAGAACCGTATAAATAATGTGTAAATGGCTGTAATAAGAATTGA  100

seq1  GGTAACTCTTGGAGGTACCTAACTGGGATGTGGAATCAGCTAGGGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTCTTGGAGGTACCTAACTGGGATGTGGAATCAGCTAGGGTGCTT  150

seq1  GGTTTCTAGATGGTCTAATGAACACTCAGCCCCAAGGTTGCAGGATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTAGATGGTCTAATGAACACTCAGCCCCAAGGTTGCAGGATTTTG  200

seq1  TTGACAGTCACAGATCTCGAGTTCTTCCAAAAGTCTTATGAACATTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGTCACAGATCTCGAGTTCTTCCAAAAGTCTTATGAACATTAATT  250

seq1  CCTCACGAATATAGATTATCAAATCTACTTTTGATAGGAACTCACTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACGAATATAGATTATCAAATCTACTTTTGATAGGAACTCACTATTT  300

seq1  TCTAGAAAGTGTTAAAAGTGAATACACAACTTGACATGATCATTCTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAGTGTTAAAAGTGAATACACAACTTGACATGATCATTCTGAGT  350

seq1  CAACAGAGTTCCTTGTGAATGACAAACTCCAACCTTGACAACTCTCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGTTCCTTGTGAATGACAAACTCCAACCTTGACAACTCTCCTAT  400

seq1  GAAAACACATGAAGCAAAGCTTAATAACACATGCCTATAACTGCAGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACATGAAGCAAAGCTTAATAACACATGCCTATAACTGCAGTACC  450

seq1  AGGGGAACTGCCAATCGTGCTAACTTAGAGCTAGAGAGCAAGCCCAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACTGCCAATCGTGCTAACTTAGAGCTAGAGAGCAAGCCCAAGTC  500

seq1  TGGCTTTCTAGAAAGAGAAACCCTTGAGTTAAAGAGGCAAAAGTTTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTCTAGAAAGAGAAACCCTTGAGTTAAAGAGGCAAAAGTTTGAGT  550

seq1  ATTTATGGAGAATGGTTCCATAAAGGCTGGAGACCCTGGTGAAGCTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGAGAATGGTTCCATAAAGGCTGGAGACCCTGGTGAAGCTAGTG  600

seq1  GACATGAGTCCAGGACTGGGGTGCTAAGAGACTATTGGCCACATTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGTCCAGGACTGGGGTGCTAAGAGACTATTGGCCACATTGGTCT  650

seq1  GATTGCTTTACCATGTCTGAAAGGAGGAATAGATTAGCATGGGAAG-TTT  699
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GATTGCTTTACCATGTCTGAAAGGAGGAATAGATTAGCATGGGAAGTTTT  700

seq1  TTTTTTTTTCTACTTACAACCAAGTGCAATTTTGTTTGCATTTCTACCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTACTTACAACCAAGTGCAATTTTGTTTGCATTTCTACCCA  750

seq1  TCTTTCTGAGAAATGAACTCGAAGAGTCTCAAAGACAATACACCTAAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAGAAATGAACTCGAAGAGTCTCAAAGACAATACACCTAAGAA  800

seq1  CAACAATGACAAAAGATTATAAATGTTATAATCAAAATCTCGAAACAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGACAAAAGATTATAAATGTTATAATCAAAATCTCGAAACAAAA  850

seq1  AGAATTTCAAAAAAGAAAAGAAACTATATGTTTTGTCAACTGACCCTCCT  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAATTTCAAAAAAGAAAAGAAACTATATG-TTTGTCAACTGACCCTCCT  899

seq1  GGCCCCACAAAAAAATTATCTGACAGAATCCAATACCAATTCATGATTCA  949
      ||| |||| |||||||||||||||||| ||||||||||||||||||||||
seq2  GGCTCCAC-AAAAAATTATCTGACAGATTCCAATACCAATTCATGATTCA  948

seq1  CAAGAAATGCTCAGTTCAAGAGCAATAAAGAATATTTCTGTCACCTTCAC  999
      | ||||||||||||||||||||| ||||   ||| |||||||| ||||||
seq2  C-AGAAATGCTCAGTTCAAGAGC-ATAA--GATA-TTCTGTCA-CTTCAC  992

seq1  AAGAATATCTAAAACGCTCTTATAGCTAACATCATACTTGATGGTTAAAG  1049
      |||||||||| |||||||||||||||| |||||||||||||||| |||  
seq2  AAGAATATCT-AAACGCTCTTATAGCT-ACATCATACTTGATGGGTAAGA  1040

seq1  ACTGCTTTCGGTCTAAGATGGGAAACAAAGATATACGCTGT  1090
      |||||||||||||| |||||||||   ||||||||||||||
seq2  ACTGCTTTCGGTCT-AGATGGGAA--CAAGATATACGCTGT  1078