BAC Information

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BAC

Clone NameB6Ng01-021N03
Chromosome8 (Build37)
Map Location 45,392,327 - 45,502,807
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021N03.bB6Ng01-021N03.g
ACCDH854221DH854222
length1,0161,045
definitionDH854221|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N03, 5' end.DH854222|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,392,327 - 45,393,322)(45,501,744 - 45,502,807)
sequence
gaattctcatcaaaacatgaaatctgcctagttttactatgtctgcttgt
agctggtccctatgacagaatgttccagttcagctgtggaatgtaaatcc
agagctttctatgatttttaacgaatgatttatagtattttgaaggcatg
aggtgggcttttaaaaattcaccctttatatttagtcattaatatttgtg
actatcacattttcacacagtctgaaaggtcaacttagggaagcaaagag
atatgataaatctaaaaagaaaatatgagtcttctgctttttgcaaagtt
ggtcaaagaaagagaaactaagctggtcaaaagaaagcccaacaaaggga
aagaggtggggaatctgaatctgtatggattcaagctgaatttttattga
tcactcagagtcaaagtaaattttcacaaaagcagagtggaaaaaaaggg
aaaaaatgtagaccacaaaaagagagtgactttcctgtgtctactattaa
atgtcagacctttgattaattattgagaatacacttccagaagccacact
gtaagattttgaaaaatacatacaggagtactgttctgtctactcctgga
gttttgttttcttgttaacaagccgagcaaaaggaaacagaactatgtct
ggtacatgtttcaaaactctcatccagccactgaagaatctatcttgctt
tgttacataacactcattcttctgctaataatattacattttaatacctt
acctcattcttaaggatttttcaaaataagctgtagccaaatgcatgtac
tttttagtagaatcatgaaagtctctagggaagataaagagagattgtgt
tttattgactcttgagtgtgataataacttattcctccgtgtttaccata
tgcatgtcagaaaatacagttgtgaccagaagagctatcatgtcatgtac
cctatataaaatagtgatacatatactgcatacatgtatctatgacccta
cagcagatagggtact
gaattctatcaggtacttggtggctttattatatgagcatacagggagac
acaatgagcacaccaagaggattatatatatatatattcccctttggaca
actctgttaatattcaggatatcagttttggactatttggaacattttaa
actaatatatttcttccaataacaccctcatacaaatatattgccaacta
actgagagaaatgctgcattatgtctctataaggagaaggtaataagtat
gtctctaagttagaaggaaaccctctctccattccttccttttttctttc
tccctttccttcctttcttgctttctttatttagccaagaagccaccgaa
tgctggtatgcacactgccatttctactttgatgggagcagcagtctatg
agacttgggtattcaggaagtaagtgagggaaggaattgcaaaggacaca
ggaaatagcttggttctagttattcagataagaacaagtttgggaagatg
tcgggtgtactgatgggtactgctaatctagtgtgccacttcagggatgg
aatgaagtaaaagaggaaatgacgttgtccagtgtaggatgctaagaaac
ctaacaggttggcaagtccactcatatcagggagtatgatgagtagagta
ggtatgtgaactttgacgacagacagttgggtactgtgttagtcagcctt
acaccaaggtgggaagataccttgatatgaataacatgcacaaggaagac
ttattctggctgatgttttcagtcccatttactgtgagtttctgttaagg
cagaaaatggcaatagaagaaggcgcagaggaaaaaatttctcactatct
gctcttctgaaagcagattaccaagagaaacagaaagtaaagggacaaga
tatgacctacaagattcaccacaatgaattactttctctaatctcctctt
tctaattcacatctccacaatgcataaattgagcctatactagataaatc
aatgattagtcagatgccatttttcagttatttcatcgataacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45392327_45393322
seq2: B6Ng01-021N03.b_46_1031

seq1  GAATTCTCATCAAAACATGAAATCTGCCTAGTTTTACTATGTCTGCTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCAAAACATGAAATCTGCCTAGTTTTACTATGTCTGCTTGT  50

seq1  AGCTGGTCCCTATGACAGAATGTTCCAGTTCAGCTGTGGAATGTAAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCCCTATGACAGAATGTTCCAGTTCAGCTGTGGAATGTAAATCC  100

seq1  AGAGCTTTCTATGATTTTTAACGAATGATTTATAGTATTTTGAAGGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTCTATGATTTTTAACGAATGATTTATAGTATTTTGAAGGCATG  150

seq1  AGGTGGGCTTTTAAAAATTCACCCTTTATATTTAGTCATTAATATTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGCTTTTAAAAATTCACCCTTTATATTTAGTCATTAATATTTGTG  200

seq1  ACTATCACATTTTCACACAGTCTGAAAGGTCAACTTAGGGAAGCAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCACATTTTCACACAGTCTGAAAGGTCAACTTAGGGAAGCAAAGAG  250

seq1  ATATGATAAATCTAAAAAGAAAATATGAGTCTTCTGCTTTTTGCAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATAAATCTAAAAAGAAAATATGAGTCTTCTGCTTTTTGCAAAGTT  300

seq1  GGTCAAAGAAAGAGAAACTAAGCTGGTCAAAAGAAAGCCCAACAAAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGAAAGAGAAACTAAGCTGGTCAAAAGAAAGCCCAACAAAGGGA  350

seq1  AAGAGGTGGGGAATCTGAATCTGTATGGATTCAAGCTGAATTTTTATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTGGGGAATCTGAATCTGTATGGATTCAAGCTGAATTTTTATTGA  400

seq1  TCACTCAGAGTCAAAGTAAATTTTCACAAAAGCAGAGTGGAAAAAAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGAGTCAAAGTAAATTTTCACAAAAGCAGAGTGGAAAAAAAGGG  450

seq1  AAAAAATGTAGACCACAAAAAGAGAGTGACTTTCCTGTGTCTACTATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTAGACCACAAAAAGAGAGTGACTTTCCTGTGTCTACTATTAA  500

seq1  ATGTCAGACCTTTGATTAATTATTGAGAATACACTTCCAGAAGCCACACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGACCTTTGATTAATTATTGAGAATACACTTCCAGAAGCCACACT  550

seq1  GTAAGATTTTGAAAAATACATACAGGAGTACTGTTCTGTCTACTCCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTTTGAAAAATACATACAGGAGTACTGTTCTGTCTACTCCTGGA  600

seq1  GTTTTGTTTTCTTGTTAACAAGCCGAGCAAAAGGAAACAGAACTATGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTCTTGTTAACAAGCCGAGCAAAAGGAAACAGAACTATGTCT  650

seq1  GGTACATGTTTCAAAACTCTCATCCAGCCACTGAAGAATCTATCTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATGTTTCAAAACTCTCATCCAGCCACTGAAGAATCTATCTTGCTT  700

seq1  TGTTACATAACACTCATTCTTCTGCTAATAATATTACATTTTAATACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATAACACTCATTCTTCTGCTAATAATATTACATTTTAATACCTT  750

seq1  ACCTCATTCTTAAGGATTTTTCAAAATAAGCTGTAGCCAAATGCATGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATTCTTAAGGATTTTTCAAAATAAGCTGTAGCCAAATGCATGTAC  800

seq1  TTTTTAGTAGAATCATGAAAGTCTCTAGGGAAGATAAAGAGAGATTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTAGAATCATGAAAGTCTCTAGGGAAGATAAAGAGAGATTGTGT  850

seq1  TTTATTGACTCTTGAGTGTGATAATAACTTATTCCTCCGTGTTTACCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGACTCTTGAGTGTGATAATAACTTATTCCTCCGTGTTTACCATA  900

seq1  TGCATGTCAGAAAATACAGTTGTGACCAAGAAGAAGCTAATCATGTCATG  950
      ||||||||||||||||||||||||||| ||||| |||| |||||||||||
seq2  TGCATGTCAGAAAATACAGTTGTGACC-AGAAG-AGCT-ATCATGTCATG  947

seq1  TACCCTATATTAAAATAAGTGAATAACATTATAACTGCATAACATG  996
      ||||||||| |||||| |||||   ||| ||| ||||||| |||||
seq2  TACCCTATA-TAAAAT-AGTGA--TACA-TAT-ACTGCAT-ACATG  986

seq1: chr8_45501744_45502807
seq2: B6Ng01-021N03.g_68_1112 (reverse)

seq1  GTGTTATAGATGAAATAACTGAAAAAATGGCAATTCTGACTAAATCAATG  50
      ||||||| ||||||||||||| ||||||||||  ||||||| ||||| ||
seq2  GTGTTATCGATGAAATAACTG-AAAAATGGCA--TCTGACT-AATCATTG  46

seq1  ATTTAATCTAGTAATAGGCTCAAATATAATGCAATTGTTGGGAGATTGTG  100
      |||| ||||||| ||||||||||   | |||| |||||  ||||| ||||
seq2  ATTT-ATCTAGT-ATAGGCTCAA--TTTATGC-ATTGT--GGAGA-TGTG  88

seq1  GAAATAAGGAAGA-GAGACTTAGAGAAAGTAATTCATTGTGGGTGAATCT  149
        ||| || |||| |||| ||||||||||||||||||||| |||||||| 
seq2  --AATTAGAAAGAGGAGA-TTAGAGAAAGTAATTCATTGT-GGTGAATC-  133

seq1  TTGTAGGTCATATCTTGTCCCTTTACTTTCCTGTTTCTTCTTGGTAATCC  199
      ||||||||||||||||||||||||||||| ||||||| |||||||||| |
seq2  TTGTAGGTCATATCTTGTCCCTTTACTTT-CTGTTTC-TCTTGGTAAT-C  180

seq1  TGCTTTTCAGATG-GCAGATAGTGAGAAACTTTTCTCCTCTGCGCCTTCT  248
      ||| ||||||| | ||||||||||||||| |||| |||||||||||||||
seq2  TGC-TTTCAGAAGAGCAGATAGTGAGAAA-TTTTTTCCTCTGCGCCTTCT  228

seq1  TCTATTGCCATTTTCTGCCTTAACAGAAACTCACAGTAAATGGGACTGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGCCATTTTCTGCCTTAACAGAAACTCACAGTAAATGGGACTGAA  278

seq1  AACATCAGCCAGAATAAGTCTTCCTTGTGCATGTTATTCATATC-AGGTA  347
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AACATCAGCCAGAATAAGTCTTCCTTGTGCATGTTATTCATATCAAGGTA  328

seq1  TCTTCCCACCTTGGTGTAAGGCTGACTAACACAGTACCCAACTGTCTGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCACCTTGGTGTAAGGCTGACTAACACAGTACCCAACTGTCTGTC  378

seq1  GTCAAAGTTCACATACCTACTCTACTCATCATACTCCCTGATATGAGTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGTTCACATACCTACTCTACTCATCATACTCCCTGATATGAGTGG  428

seq1  ACTTGCCAACCTGTTAGGTTTCTTAGCATCCTACACTGGACAACGTCATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCAACCTGTTAGGTTTCTTAGCATCCTACACTGGACAACGTCATT  478

seq1  TCCTCTTTTACTTCATTCCATCCCTGAAGTGGCACACTAGATTAGCAGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTACTTCATTCCATCCCTGAAGTGGCACACTAGATTAGCAGTA  528

seq1  CCCATCAGTACACCCGACATCTTCCCAAACTTGTTCTTATCTGAATAACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGTACACCCGACATCTTCCCAAACTTGTTCTTATCTGAATAACT  578

seq1  AGAACCAAGCTATTTCCTGTGTCCTTTGCAATTCCTTCCCTCACTTACTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAGCTATTTCCTGTGTCCTTTGCAATTCCTTCCCTCACTTACTT  628

seq1  CCTGAATACCCAAGTCTCATAGACTGCTGCTCCCATCAAAGTAGAAATGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATACCCAAGTCTCATAGACTGCTGCTCCCATCAAAGTAGAAATGG  678

seq1  CAGTGTGCATACCAGCATTCGGTGGCTTCTTGGCTAAATAAAGAAAGCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGCATACCAGCATTCGGTGGCTTCTTGGCTAAATAAAGAAAGCAA  728

seq1  GAAAGGAAGGAAAGGGAGAAAGAAAAAAGGAAGGAATGGAGAGAGGGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGGAAAGGGAGAAAGAAAAAAGGAAGGAATGGAGAGAGGGTTT  778

seq1  CCTTCTAACTTAGAGACATACTTATTACCTTCTCCTTATAGAGACATAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAACTTAGAGACATACTTATTACCTTCTCCTTATAGAGACATAAT  828

seq1  GCAGCATTTCTCTCAGTTAGTTGGCAATATATTTGTATGAGGGTGTTATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATTTCTCTCAGTTAGTTGGCAATATATTTGTATGAGGGTGTTATT  878

seq1  GGAAGAAATATATTAGTTTAAAATGTTCCAAATAGTCCAAAACTGATATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAATATATTAGTTTAAAATGTTCCAAATAGTCCAAAACTGATATC  928

seq1  CTGAATATTAACAGAGTTGTCCAAAGGGGAATATATATATATATAATCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATTAACAGAGTTGTCCAAAGGGGAATATATATATATATAATCCT  978

seq1  CTTGGTGTGCTCATTGTGTCTCCCTGTATGCTCATATAATAAAGCCACCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTGCTCATTGTGTCTCCCTGTATGCTCATATAATAAAGCCACCA  1028

seq1  AGTACCTGATAGAATTC  1064
      |||||||||||||||||
seq2  AGTACCTGATAGAATTC  1045