BAC Information

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BAC

Clone NameB6Ng01-022J13
Chromosome8 (Build37)
Map Location 110,828,969 - 110,979,196
singlet/doubletdoublet
Overlap genenone
Upstream geneNfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022J13.bB6Ng01-022J13.g
ACCDH854759DH854760
length273388
definitionDH854759|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J13, 5' end.DH854760|Mus musculus domesticus DNA, BAC clone: B6Ng01-022J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,978,924 - 110,979,196)(110,828,969 - 110,829,362)
sequence
atgtccagatgccttgaccggccgagccagatcctcattggcatgccagc
tgctcaaagaggaacagggccccttgcatactaatcagcggaggaggcag
tgattcatcagcccatgataccgctccagcatctacaagcacttatgaca
tgtaattggtggtgcataagcaagccaggccacattaaaaaccccacaga
tagtcagagataaaaattaatgacttttgctttgtgtaatcctgcatgcc
ttggtgggtaagggaggggggtt
caccaaggaatgaaggtatatacctagaactgtgttcatgtactgtgggt
ggagtctgcagttagtcatcgaggcagctgggttctccccagaaacccag
gattcttttatccccctgtacaaacatccttagcaagcatcttccatctt
ccaggtcatttcataagtcactcaggacatgtcagtgtgagccaggagct
ttgcagagctttacaacatttcccaggactttacctggggtgtggcctgc
taccaggatgagctgctcatccatcttgtagactccctctaccacgtggt
tcatcttatctgtccctgaactttcttttttaaaggacctgagggatggg
cacacaggagaactcctggggtgaggggtgggggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_110978924_110979196
seq2: B6Ng01-022J13.b_49_321 (reverse)

seq1  AACCCCCCTCCCTTACCCACCAAGGCATGCAGGATTACACAAAGCAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCTCCCTTACCCACCAAGGCATGCAGGATTACACAAAGCAAAAG  50

seq1  TCATTAATTTTTATCTCTGACTATCTGTGGGGTTTTTAATGTGGCCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTTTTATCTCTGACTATCTGTGGGGTTTTTAATGTGGCCTGGC  100

seq1  TTGCTTATGCACCACCAATTACATGTCATAAGTGCTTGTAGATGCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATGCACCACCAATTACATGTCATAAGTGCTTGTAGATGCTGGAG  150

seq1  CGGTATCATGGGCTGATGAATCACTGCCTCCTCCGCTGATTAGTATGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTATCATGGGCTGATGAATCACTGCCTCCTCCGCTGATTAGTATGCAA  200

seq1  GGGGCCCTGTTCCTCTTTGAGCAGCTGGCATGCCAATGAGGATCTGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCCTGTTCCTCTTTGAGCAGCTGGCATGCCAATGAGGATCTGGCTC  250

seq1  GGCCGGTCAAGGCATCTGGACAT  273
      |||||||||||||||||||||||
seq2  GGCCGGTCAAGGCATCTGGACAT  273

seq1: chr8_110828969_110829362
seq2: B6Ng01-022J13.g_67_460

seq1  GAATTCCACCAAGGAATGAAGGTATATACCTAGAACTGTGTTCATGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAAGGAATGAAGGTATATACCTAGAACTGTGTTCATGTACT  50

seq1  GTGGGTGGAGTCTGCAGTTAGTCATCGAGGCAGCTGGGTTCTCCCCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGAGTCTGCAGTTAGTCATCGAGGCAGCTGGGTTCTCCCCAGAA  100

seq1  ACCCAGGATTCTTTTATCCCCCTGTACAAACATCCTTAGCAAGCATCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGATTCTTTTATCCCCCTGTACAAACATCCTTAGCAAGCATCTTC  150

seq1  CATCTTCCAGGTCATTTCATAAGTCACTCAGGACATGTCAGTGTGAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCAGGTCATTTCATAAGTCACTCAGGACATGTCAGTGTGAGCCA  200

seq1  GGAGCTTTGCAGAGCTTTACAACATTTCCCAGGACTTTACCTGGGGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTTGCAGAGCTTTACAACATTTCCCAGGACTTTACCTGGGGTGTG  250

seq1  GCCTGCTACCAGGATGAGCTGCTCATCCATCTTGTAGACTCCCTCTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTACCAGGATGAGCTGCTCATCCATCTTGTAGACTCCCTCTACCA  300

seq1  CGTGGTTCATCTTATCTGTCCCTGAACTTTCTTTTTTAAAGGACCTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTTCATCTTATCTGTCCCTGAACTTTCTTTTTTAAAGGACCTGAGG  350

seq1  GATGGGCACACAGGAGAACTCCTGGGGTGAGGGGTGGGGGAGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCACACAGGAGAACTCCTGGGGTGAGGGGTGGGGGAGAT  394