BAC Information

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BAC

Clone NameB6Ng01-022O05
Chromosome8 (Build37)
Map Location 101,749,080 - 101,850,838
singlet/doubletdoublet
Overlap geneCdh8
Upstream genenone
Downstream geneA330008L17Rik, LOC667531, LOC100042069, LOC436054, LOC100042078
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O05.bB6Ng01-022O05.g
ACCDH854965DH854966
length985201
definitionDH854965|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O05, 5' end.DH854966|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,849,853 - 101,850,838)(101,749,080 - 101,749,280)
sequence
gaattcactctgtagaccatgttggcctcacactcagaaatctgcaggcc
tctgccttccaagtgctgggatcaaaggcatgcgccactactgcctggaa
atttataggattttaatggagtgccttagtactgttatatttctgggaag
agacaccaggactaaggcaaggcttaaaaaggaaagtatttaactggtgg
tgtgtttatagttttagagggttatcccatgatcactatggtgagaacca
gacaggcatggtactggagcagtagctgagagcttttcatcttgatcgcc
aagttgcaggcaaagaaaatgagagacactgaccctgacatgggcttttg
aaacatcaaagcccactctaagtgacacacctccttccctgaaggtcaca
cctcctaatttttcccaaaagagttccactgacaaattggaacatataaa
gtaacatacaacatgatacagaacactaagacagttaatgatagactact
ccaagcagtgatgctctaaggttatactgcagtttaagctttcccattgc
gtaatgatcttatatccattcggatacagtagggtaatgtatcacttaca
tgtctgtagtcaagttggagtaaaacaaactgttccattggtgtcattgc
aaagtgtagtttgtagacttaattagagcatgcagtgcttggtatcaata
ttgacaatgctgctgctttgagaatcttttaggcatgccttagggatgtc
ctctttttagtttatttgtagtacagttttgtaaaagcacaacacaaaag
cagcatatcgggttgaagtctggtacatcttgtgttttcctgtgtttcat
ggttgtaagaaaagttcatttcaaatcctgacttctggacatgacatgtt
tgtgcatgcatcatttcccagcatcttgagttatgcacacgaaacatgca
cagatgagccagtcaaaatccaccacatgttctga
tgtaatttttgatccaattactcattcagtggtaattctctctctgtctc
tctctctctgtctcttgctctctgtgtctctctgtctctctgtctctctc
tgtctctctgtccctgtctctctgtctctgtctctgtctctctgtctctc
tgtctctctgtctctgtctctctctctctctctctctctctctctctatc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_101849853_101850838
seq2: B6Ng01-022O05.b_45_1029 (reverse)

seq1  TCAG-ACATGTGGTGGAATTTTGACTGGCTCAATCTTGTGCATGTTTCGT  49
      |||| ||||||||||| |||||||||||||| ||| ||||||||||||||
seq2  TCAGAACATGTGGTGG-ATTTTGACTGGCTC-ATC-TGTGCATGTTTCGT  47

seq1  GTGCATAACTCAAGATGCTGGGAATTGATGCATGCAACAAACATGTCATG  99
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  GTGCATAACTCAAGATGCTGGGAAATGATGCATGC-ACAAACATGTCATG  96

seq1  TCCAGAAGTCAGGATTTGAAATGAACTTTTCTTACAACCATGAAACACAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGTCAGGATTTGAAATGAACTTTTCTTACAACCATGAAACACAG  146

seq1  G-AAACACAAGATGTACCAGACTTCAACCCGATATGCTGC-TTTGTGTTG  197
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAAACACAAGATGTACCAGACTTCAACCCGATATGCTGCTTTTGTGTTG  196

seq1  TGCTTTTACAAAACTGTACTACAAATAAACTAAAAAGAGGACATCCCTAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACAAAACTGTACTACAAATAAACTAAAAAGAGGACATCCCTAA  246

seq1  GGCATGCCTAAAAGATTCTCAAAGCAGCAGCATTGTCAATATTGATACCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCCTAAAAGATTCTCAAAGCAGCAGCATTGTCAATATTGATACCA  296

seq1  AGCACTGCATGCTCTAATTAAGTCTACAAACTACACTTTGCAATGACACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCATGCTCTAATTAAGTCTACAAACTACACTTTGCAATGACACC  346

seq1  AATGGAACAGTTTGTTTTACTCCAACTTGACTACAGACATGTAAGTGATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAACAGTTTGTTTTACTCCAACTTGACTACAGACATGTAAGTGATA  396

seq1  CATTACCCTACTGTATCCGAATGGATATAAGATCATTACGCAATGGGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCCTACTGTATCCGAATGGATATAAGATCATTACGCAATGGGAAA  446

seq1  GCTTAAACTGCAGTATAACCTTAGAGCATCACTGCTTGGAGTAGTCTATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAACTGCAGTATAACCTTAGAGCATCACTGCTTGGAGTAGTCTATC  496

seq1  ATTAACTGTCTTAGTGTTCTGTATCATGTTGTATGTTACTTTATATGTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGTCTTAGTGTTCTGTATCATGTTGTATGTTACTTTATATGTTC  546

seq1  CAATTTGTCAGTGGAACTCTTTTGGGAAAAATTAGGAGGTGTGACCTTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTCAGTGGAACTCTTTTGGGAAAAATTAGGAGGTGTGACCTTCA  596

seq1  GGGAAGGAGGTGTGTCACTTAGAGTGGGCTTTGATGTTTCAAAAGCCCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGGTGTGTCACTTAGAGTGGGCTTTGATGTTTCAAAAGCCCAT  646

seq1  GTCAGGGTCAGTGTCTCTCATTTTCTTTGCCTGCAACTTGGCGATCAAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGTCAGTGTCTCTCATTTTCTTTGCCTGCAACTTGGCGATCAAGA  696

seq1  TGAAAAGCTCTCAGCTACTGCTCCAGTACCATGCCTGTCTGGTTCTCACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCTCTCAGCTACTGCTCCAGTACCATGCCTGTCTGGTTCTCACC  746

seq1  ATAGTGATCATGGGATAACCCTCTAAAACTATAAACACACCACCAGTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATCATGGGATAACCCTCTAAAACTATAAACACACCACCAGTTAA  796

seq1  ATACTTTCCTTTTTAAGCCTTGCCTTAGTCCTGGTGTCTCTTCCCAGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCCTTTTTAAGCCTTGCCTTAGTCCTGGTGTCTCTTCCCAGAAA  846

seq1  TATAACAGTACTAAGGCACTCCATTAAAATCCTATAAATTTCCAGGCAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGTACTAAGGCACTCCATTAAAATCCTATAAATTTCCAGGCAGT  896

seq1  AGTGGCGCATGCCTTTGATCCCAGCACTTGGAAGGCAGAGGCCTGCAGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCGCATGCCTTTGATCCCAGCACTTGGAAGGCAGAGGCCTGCAGAT  946

seq1  TTCTGAGTGTGAGGCCAACATGGTCTACAGAGTGAATTC  986
      |||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTGTGAGGCCAACATGGTCTACAGAGTGAATTC  985

seq1: chr8_101749080_101749280
seq2: B6Ng01-022O05.g_72_272

seq1  TGTAATTTTTGATCCAATTACTCATTCAGTGGTAATTCTCTCTCTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTTGATCCAATTACTCATTCAGTGGTAATTCTCTCTCTGTCTC  50

seq1  TCTCTCTCTGTCTCTTGCTCTCTGTGTCTCTCTGTCTCTCTGTCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTCTTGCTCTCTGTGTCTCTCTGTCTCTCTGTCTCTCTC  100

seq1  TGTCTCTCTGTCCCTGTCTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTGTCCCTGTCTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTC  150

seq1  TGTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATC  200

seq1  T  201
      |
seq2  T  201