BAC Information

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BAC

Clone NameB6Ng01-022O17
Chromosome8 (Build37)
Map Location 59,310,757 - 59,377,729
singlet/doubletdoublet
Overlap genenone
Upstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O17.bB6Ng01-022O17.g
ACCDH854989DH854990
length1,086999
definitionDH854989|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O17, 5' end.DH854990|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,376,637 - 59,377,729)(59,310,757 - 59,311,759)
sequence
gaattcttaaacatttttattatttcaccccttctccgttgttttgcatt
ctgttaagtattccaactttcttccatgtgcaaacattatcctgtggaga
tacttcttcagcaccaccaaactagttagactccagacctgtgaggaaga
gtgaattgagaagtcatttttgtttatttactaacattggaaaaaaagaa
gaaacaacacctccatatggcttttgagtacatttgaagtatgaaaggga
aactgaaaagtggttctacatagctataaaagtgctgtgccactttggac
tattcatattatgtgtcacctatacttactttcataagtcaatcaaaaac
attatacttctgtggcctagagcgatgcttcagtgttatgagctgctctt
tcagaggacctgggttcaattccaagcacccatatggtagctcacaactg
tctctaacttcagtttcacaggatctgacaccctcatacagacatccatg
caatcaaaacaccaatgcacataaaataaaaataaatgtattagttaaaa
atactatttccaacaaaacatacttcaatagttataattttatattgtaa
aatttaaattaggaacaatataaaatatttctatgaatatcatttccata
ctataatatatataaactctagagttgggtataaaataaataaacagaat
acatttgattctgttcaaaaaatactcattctctattgttcactaagaac
tattctaaaaaaaaagaacatgaaaacaaatgtctaacaaatggaaccta
catagttagattatgttatcataacagtgtttatatctaacaagacttaa
tacagttgttgagaagacagcatactgaaattttagaaaaatagctatct
tcagtacaggtaaagtctttatagacaaaaaaggacttagttagagagta
tatagataatgtataagtgagattgaagagatgccaagagaaaaactgac
tgaaaattatccgaaaagtctaggaaactggtgggaaagaagccaagaaa
acgaaaatggatttgataagttaagaactaaaatat
gaattcctctccctttcagtgtgatttatacaatcagtcaaatctctgat
ttgtttagctccctcagcgatctccagtgtttgcttcttgcatgccttcc
tttcttgtctatggagagtgtctttcaatgtacctgtagaactaaaaaag
atgctgcaagagaaagacattgaaatatatcattgccttcatgtgaatct
tacattttcccctcttatgagtttgtactatctttcctacaaggagttgt
aatcttagttggttcgctctagagccaagacaagattccacacatttctg
aaatagctgctataatttattgtcatcgcagagcagttagatttaaaccc
tcatggacccaatgccacaaaacagctcttcagagttcaaaggggtaggt
ctacactgcaagtaagttatcgctaatggtgccactataacccttgctgt
gccctggctgctcctggtgtttcaaaattcatgtgatacccaaaaccctt
ccaatacttctcacacatattctattgagtaaatctcaggtgtcatggta
aaacgccttcaatgatttgcttcctgccactaacacagtttattttccaa
acaacaacaacaacaaaaacgtgtttccccaagaatacaaactcctcctg
acgaaccctccagtgccaaatgtggtttccatttgctctttttggattta
tatgactgtgccaaagttcaggtgtgccagctctttgtaataagctattt
ggatgaaagctgggtcggctcaaaggatcctgatgtattttattgccgcc
ttttaagattattgttcagaaataccaagtctaattttgaaatcaattag
ccattgggtctgatgaggtgtttgcccagctcagttcacacccgcttttt
tgattactgttcacttgagtcaagtccctagcatcgcgctgctcctcaca
tctgtgggacacttgtttgatgtctcacagaaagagtgatggttaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59376637_59377729
seq2: B6Ng01-022O17.b_48_1133 (reverse)

seq1  ATATTTTAGTTCTCTAAATCTTATCAAAATTCAATTTC-TGTTCTTTGCT  49
      ||||||||||||| |||  |||||| |||| || |||| | ||||| |||
seq2  ATATTTTAGTTCT-TAA--CTTATC-AAATCCATTTTCGTTTTCTTGGCT  46

seq1  TACTTTCCATCAGTTTCCTAGACTTTTCTGGATAATTTCTCAGTCAG-TT  98
      |  || ||| |||||||||||||||||| ||||||||| |||||||| ||
seq2  TCTTTCCCACCAGTTTCCTAGACTTTTC-GGATAATTT-TCAGTCAGTTT  94

seq1  TTCTCTTGGCATCTCTTC-ATCTCACTAATTACATTATCTATATAACTCT  147
      |||||||||||||||||| |||||||| | |||||||||||||| |||||
seq2  TTCTCTTGGCATCTCTTCAATCTCACTTA-TACATTATCTATAT-ACTCT  142

seq1  CTAACTAAGTCCCTTTTTTGTCTATAAAGACTTTACCTGTACCTGAAGAT  197
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  CTAACTAAGT-CCTTTTTTGTCTATAAAGACTTTACCTGTA-CTGAAGAT  190

seq1  AGCTATTTTTCTAAAATTTCAGTATGCTGTCTTCTCAACAACTGTATTAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTTCTAAAATTTCAGTATGCTGTCTTCTCAACAACTGTATTAA  240

seq1  GTCTTGTTAGATATAAACACTGTTATGATAACATAATCTAACTATGTAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTTAGATATAAACACTGTTATGATAACATAATCTAACTATGTAGG  290

seq1  TTCCATTTGTTAGACATTTGTTTTCATGTTCTTTTTTTTTAGAATAGTTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTGTTAGACATTTGTTTTCATGTTCTTTTTTTTTAGAATAGTTC  340

seq1  TTAGTGAACAATAGAGAATGAGTATTTTTTGAACAGAATCAAATGTATTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAACAATAGAGAATGAGTATTTTTTGAACAGAATCAAATGTATTC  390

seq1  TGTTTATTTATTTTATACCCAACTCTAGAGTTTATATATATTATAGTATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTATTTTATACCCAACTCTAGAGTTTATATATATTATAGTATG  440

seq1  GAAATGATATTCATAGAAATATTTTATATTGTTCCTAATTTAAATTTTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATATTCATAGAAATATTTTATATTGTTCCTAATTTAAATTTTAC  490

seq1  AATATAAAATTATAACTATTGAAGTATGTTTTGTTGGAAATAGTATTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATTATAACTATTGAAGTATGTTTTGTTGGAAATAGTATTTTT  540

seq1  AACTAATACATTTATTTTTATTTTATGTGCATTGGTGTTTTGATTGCATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATACATTTATTTTTATTTTATGTGCATTGGTGTTTTGATTGCATG  590

seq1  GATGTCTGTATGAGGGTGTCAGATCCTGTGAAACTGAAGTTAGAGACAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGTATGAGGGTGTCAGATCCTGTGAAACTGAAGTTAGAGACAGT  640

seq1  TGTGAGCTACCATATGGGTGCTTGGAATTGAACCCAGGTCCTCTGAAAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTACCATATGGGTGCTTGGAATTGAACCCAGGTCCTCTGAAAGA  690

seq1  GCAGCTCATAACACTGAAGCATCGCTCTAGGCCACAGAAGTATAATGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCATAACACTGAAGCATCGCTCTAGGCCACAGAAGTATAATGTTT  740

seq1  TTGATTGACTTATGAAAGTAAGTATAGGTGACACATAATATGAATAGTCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGACTTATGAAAGTAAGTATAGGTGACACATAATATGAATAGTCC  790

seq1  AAAGTGGCACAGCACTTTTATAGCTATGTAGAACCACTTTTCAGTTTCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGCACAGCACTTTTATAGCTATGTAGAACCACTTTTCAGTTTCCC  840

seq1  TTTCATACTTCAAATGTACTCAAAAGCCATATGGAGGTGTTGTTTCTTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACTTCAAATGTACTCAAAAGCCATATGGAGGTGTTGTTTCTTCT  890

seq1  TTTTTTCCAATGTTAGTAAATAAACAAAAATGACTTCTCAATTCACTCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAATGTTAGTAAATAAACAAAAATGACTTCTCAATTCACTCTT  940

seq1  CCTCACAGGTCTGGAGTCTAACTAGTTTGGTGGTGCTGAAGAAGTATCTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGGTCTGGAGTCTAACTAGTTTGGTGGTGCTGAAGAAGTATCTC  990

seq1  CACAGGATAATGTTTGCACATGGAAGAAAGTTGGAATACTTAACAGAATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATAATGTTTGCACATGGAAGAAAGTTGGAATACTTAACAGAATG  1040

seq1  CAAAACAACGGAGAAGGGGTGAAATAATAAAAATGTTTAAGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACGGAGAAGGGGTGAAATAATAAAAATGTTTAAGAATTC  1086

seq1: chr8_59310757_59311759
seq2: B6Ng01-022O17.g_72_1070

seq1  GAATTCCTCTCCCTTTCAGTGTGATTTATACAATCAGTCAAATCTCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCCCTTTCAGTGTGATTTATACAATCAGTCAAATCTCTGAT  50

seq1  TTGTTTAGCTCCCTCAGCGATCTCCAGTGTTTGCTTCTTGCATGCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAGCTCCCTCAGCGATCTCCAGTGTTTGCTTCTTGCATGCCTTCC  100

seq1  TTTCTTGTCTATGGAGAGTGTCTTTCAATGTACCTGTAGAACTAAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCTATGGAGAGTGTCTTTCAATGTACCTGTAGAACTAAAAAAG  150

seq1  ATGCTGCAAGAGAAAGACATTGAAATATATCATTGCCTTCATGTGAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCAAGAGAAAGACATTGAAATATATCATTGCCTTCATGTGAATCT  200

seq1  TACATTTTCCCCTCTTATGAGTTTGTACTATCTTTCCTACAAGGAGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCCCCTCTTATGAGTTTGTACTATCTTTCCTACAAGGAGTTGT  250

seq1  AATCTTAGTTGGTTCGCTCTAGAGCCAAGACAAGATTCCACACATTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGTTGGTTCGCTCTAGAGCCAAGACAAGATTCCACACATTTCTG  300

seq1  AAATAGCTGCTATAATTTATTGTCATCGCAGAGCAGTTAGATTTAAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCTGCTATAATTTATTGTCATCGCAGAGCAGTTAGATTTAAACCC  350

seq1  TCATGGACCCAATGCCACAAAACAGCTCTTCAGAGTTCAAAGGGGTAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACCCAATGCCACAAAACAGCTCTTCAGAGTTCAAAGGGGTAGGT  400

seq1  CTACACTGCAAGTAAGTTATCGCTAATGGTGCCACTATAACCCTTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTGCAAGTAAGTTATCGCTAATGGTGCCACTATAACCCTTGCTGT  450

seq1  GCCCTGGCTGCTCCTGGTGTTTCAAAATTCATGTGATACCCAAAACCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGCTCCTGGTGTTTCAAAATTCATGTGATACCCAAAACCCTT  500

seq1  CCAATACTTCTCACACATATTCTATTGAGTAAATCTCAGGTGTCATGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACTTCTCACACATATTCTATTGAGTAAATCTCAGGTGTCATGGTA  550

seq1  AAACGCCTTCAATGATTTGCTTCCTGCCACTAACACAGTTTATTTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCCTTCAATGATTTGCTTCCTGCCACTAACACAGTTTATTTTCCAA  600

seq1  ACAACAACAACAACAAAAACGTGTTTCCCCAAGAATACAAACTCCTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAAAAACGTGTTTCCCCAAGAATACAAACTCCTCCTG  650

seq1  ACGAACCCTCCAGTGCCAAATGTGGTTTCCATTTGCTCTTTTTGGATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACCCTCCAGTGCCAAATGTGGTTTCCATTTGCTCTTTTTGGATTTA  700

seq1  TATGACTGTGCCAAAGTTCAGGTGTGCCAGCTCTTTGTAATAAGCTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTGTGCCAAAGTTCAGGTGTGCCAGCTCTTTGTAATAAGCTATTT  750

seq1  GGATGAAAGCTGGGTCGGCTCAAAGGATCCTGATGTATTTTATTGCCGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAAGCTGGGTCGGCTCAAAGGATCCTGATGTATTTTATTGCCGCC  800

seq1  TTTTAAGATTATTGTTCAGAAATACCAAGTCTAATTTTGAAATCAATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGATTATTGTTCAGAAATACCAAGTCTAATTTTGAAATCAATTAG  850

seq1  CCATTGGGTCTGATGAGGTGTTGGCCCAGCTCAGGTTCACACCCGCTGTC  900
      |||||||||||||||||||||| |||||||||| ||||||||||||| | 
seq2  CCATTGGGTCTGATGAGGTGTTTGCCCAGCTCA-GTTCACACCCGCTTTT  899

seq1  TAGATTACTGTTCACTTGAGTCAAGTCCCTAGCATCGCGCTGCTCCTCAG  950
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGATTACTGTTCACTTGAGTCAAGTCCCTAGCATCGCGCTGCTCCTCA-  948

seq1  CATCTGGTGGACACATGTTTGATGTTCTCACAGAAAGAGTTGATGGTTAA  1000
      ||||||  |||||| ||||||||| |||||||||||||| ||||||||||
seq2  CATCTGTGGGACACTTGTTTGATG-TCTCACAGAAAGAG-TGATGGTTAA  996

seq1  AAG  1003
      |||
seq2  AAG  999