BAC Information

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BAC

Clone NameB6Ng01-023A05
Chromosome8 (Build37)
Map Location 53,686,102 - 53,687,123
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
Downstream geneLOC676688, Aga, Neil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023A05.bB6Ng01-023A05.g
ACCDH855055DH855056
length1,0111,244
definitionDH855055|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A05, 5' end.DH855056|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagaatgactatgacatcacatgcaattaaacaggtgccaaac
ctgtcttgctgatggtttattttgtataatgttttaactgatcatttgat
ttgtgggttattatttttttaaactttccagaatcaagttaaacatgtca
tattttaaaaataattatgttgatgtacaagtctacagagatatctcagg
cattaagtgcacatagccaagattcagtcacccatatgtactttgtgttc
tatgaatctcataattcccattccaggggacatgatggtctctgctcccc
tccatggatagcaggaatgcatgtgaatcatgtgcgtacatcaaggccga
acactgacatggatgcaatgcaatgaataaaaatggtttgaaggctgtgt
taattttaatctgtgtgaaaataaggcagtttgtaaactcgtctttaaat
tttaataaatatacctgtttctattactatagaaatatatacatgatttt
gcaggaaagaaagtagtatatgactaactgttgtggttaaaataagagat
gacaggcacaagtcccttccgctcgactcgtgacttgagccccgggctac
cttgccagcagagtcttgcccaacacccgcaagggtccacacaggactcc
ccacgggaccctaagacctctggtgagtggatcacagtgcctgccccaat
ccaatcgcgcggaactcgagactgcggtacatagggaagcaggctacccg
ggcctgatctggggcacaagtcccttccgctcgactcgagactcgagccc
cgggctaccttgacagcagagtcttgcccacacccgcaagggcccacacg
ggactccccacgggaccctaagacctctggtgagtggaacacagcaccta
ccccaatccattgcgtggaactggaaattgcggacataggaagcaagcta
cccgggctgatctgggcacaaacccttcacttcatcgagccctgctacct
tgcggctgagt
gaattcatgaaattcttaagcaaatgaatggacctagaaaatatcatcct
cagtgaggtaacccaatcacaaaagaacacatatggtatgcactcactgt
taagtggatatcagcccataaattcgaaatatccaagatacaattcacag
gccacatgaagctcaagaaggaagacaaaaatgtgggcactttggtcctt
cttagagaggggaacaaaatactcatgggagcaaatacagagacaaagtg
cagaacagagactgaagaaaaggccattctgagacagtctcacctgggga
ttcaccccagatacagtcaccaaactctgacactttatggatgctaagaa
atgcttgctgaaagaagcctaatatagctgtctcctgagagtccctgcag
agccttacaaatgcagaggcagatgcttggagccaatcattgcactgagc
atggggttcccaatggaggagttagacaaaggactgaaggagctaaaggg
gtttgcaaccaaccagacacctccctcccctcccccagagctcccagaga
ttaagccatcaaccaagaagtacacatggctccagctgcatatgcttcag
tgggtggtcttgtcaggcatcaatgggaggagaggtccatggtcctatga
aggctaaatagatgccccaaggtaaaggaatcaagggcatggggaagaga
gtgggtgggtgaatggaggaactccaatattttcagtcttcatggggggg
atcagcctgtgactaacttcaggggatactactcttctctggatatactg
tagtgatcgatatacaaccatcttttatatatatctgtgcacatgatctt
tcacagatgttttctgtgtgttttcagagcaactaggagcaaaaatgata
gagtgaaaaaggctagatctattcctcatcatactatgtagagaataaca
tgtgattggagtctatgaaagagtaatatcaagtgacttggtttatctag
ggaaacaatgacaggttaacgcatgctatgcagctggtttttactttcct
ctctagatgaaagaaatgtttgcagaaatctaccgagtctaatatgggga
aagtagcagcgacatggtctagcaggagcggaagaagaactcgcactgtg
gcttcctctatgctaagactgactatgccaggcaggttagaagtcgatac
ggataaagtccatctctgatcgtccatgacgagcagcagcagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53686102_53687123
seq2: B6Ng01-023A05.b_42_1052 (reverse)

seq1  ACTCAGCTGGCAAGGTAGCCGGGGCTCGAGTGGAGTGGAAGGGGTTTGTG  50
      |||||||  ||||||||| | |||||||| || ||||  | |||||||||
seq2  ACTCAGC-CGCAAGGTAG-CAGGGCTCGA-TGAAGTG--AAGGGTTTGTG  45

seq1  CCCCAGATCAAGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAAG  100
       |||||||| |||||||||||| ||||| ||||||| ||||| | || ||
seq2  -CCCAGATC-AGCCCGGGTAGCTTGCTT-CCTATGT-CCGCAATTTCCAG  91

seq1  TTCCACGCGATTGGATTGGGGTAGGTGCTGTGTTCCACTCACCAGAGGTC  150
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  TTCCACGC-AATGGATTGGGGTAGGTGCTGTGTTCCACTCACCAGAGGTC  140

seq1  TTAGGGTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTAGGGTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTG-TGGGCAAG  189

seq1  ACTCTGCTGTCAAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTGTCAAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGG  239

seq1  GACTTGTGCCCCAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTGCCCCAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCA  289

seq1  GTCTCGAGTTCCGCGCGATTGGATTGGGGCAGGCACTGTGATCCACTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGAGTTCCGCGCGATTGGATTGGGGCAGGCACTGTGATCCACTCAC  339

seq1  CAGAGGTCTTAGGGTCCCGTGGGGAGTCCTGTGTGGACCCTTGCGGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTCTTAGGGTCCCGTGGGGAGTCCTGTGTGGACCCTTGCGGGTGT  389

seq1  TGGGCAAGACTCTGCTGGCAAGGTAGCCCGGGGCTCAAGTCACGAGTCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGACTCTGCTGGCAAGGTAGCCCGGGGCTCAAGTCACGAGTCGA  439

seq1  GCGGAAGGGACTTGTGCCTGTCATCTCTTATTTTAACCACAACAGTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAGGGACTTGTGCCTGTCATCTCTTATTTTAACCACAACAGTTAGT  489

seq1  CATATACTACTTTCTTTCCTGCAAAATCATGTATATATTTCTATAGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTACTTTCTTTCCTGCAAAATCATGTATATATTTCTATAGTAAT  539

seq1  AGAAACAGGTATATTTATTAAAATTTAAAGACGAGTTTACAAACTGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGGTATATTTATTAAAATTTAAAGACGAGTTTACAAACTGCCTT  589

seq1  ATTTTCACACAGATTAAAATTAACACAGCCTTCAAACCATTTTTATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACACAGATTAAAATTAACACAGCCTTCAAACCATTTTTATTCAT  639

seq1  TGCATTGCATCCATGTCAGTGTTCGGCCTTGATGTACGCACATGATTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGCATCCATGTCAGTGTTCGGCCTTGATGTACGCACATGATTCAC  689

seq1  ATGCATTCCTGCTATCCATGGAGGGGAGCAGAGACCATCATGTCCCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCCTGCTATCCATGGAGGGGAGCAGAGACCATCATGTCCCCTGG  739

seq1  AATGGGAATTATGAGATTCATAGAACACAAAGTACATATGGGTGACTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAATTATGAGATTCATAGAACACAAAGTACATATGGGTGACTGAA  789

seq1  TCTTGGCTATGTGCACTTAATGCCTGAGATATCTCTGTAGACTTGTACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCTATGTGCACTTAATGCCTGAGATATCTCTGTAGACTTGTACAT  839

seq1  CAACATAATTATTTTTAAAATATGACATGTTTAACTTGATTCTGGAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAATTATTTTTAAAATATGACATGTTTAACTTGATTCTGGAAAGT  889

seq1  TTAAAAAAATAATAACCCACAAATCAAATGATCAGTTAAAACATTATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATAATAACCCACAAATCAAATGATCAGTTAAAACATTATACA  939

seq1  AAATAAACCATCAGCAAGACAGGTTTGGCACCTGTTTAATTGCATGTGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACCATCAGCAAGACAGGTTTGGCACCTGTTTAATTGCATGTGAT  989

seq1  GTCATAGTCATTCTTAGAATTC  1022
      ||||||||||||||||||||||
seq2  GTCATAGTCATTCTTAGAATTC  1011