BAC Information

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BAC

Clone NameB6Ng01-023D09
Chromosome8 (Build37)
Map Location 34,176,366 - 34,356,644
singlet/doubletdoublet
Overlap geneLOC628408, EG628412, Wrn
Upstream gene2010007E15Rik, EG666589, EG546052, LOC100042715
Downstream genePurg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023D09.bB6Ng01-023D09.g
ACCDH855193DH855194
length1,028739
definitionDH855193|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D09, 5' end.DH855194|Mus musculus domesticus DNA, BAC clone: B6Ng01-023D09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,355,615 - 34,356,644)(34,176,366 - 34,177,106)
sequence
gaattctgcaggctctagtgatcttttctgtttatatactaagtaattga
tcaatattctttaacaacaacaacaacaaaaaaggactattctaacctca
attcattattgccacatatctaccgtaactccctgatttggctatggtaa
agagttgaattgctgttaatttagtttggaagttatgtgatttttaaagt
tatagaacttttggttaagaagcagaaatagaaacacttacttccactcc
taccctgttttccacagggcttggggcctagagagttttaaaaatagttt
tagtatcatttgtaagattgatgacttagcaagttttaacttttacattg
ccattttaagtcatactgccaaataaattaacttaaaagttatcaaaata
aaagtaacttaaaatttatcttaaaattaaacttaaaagttattaacaat
aaaatgtaacataattttattaagattcaggtttgttaagtcttgtttga
ctaagataattttatttctttattgttttctaatgtctttaaatattgtc
tgccataacttgtgccctctatagtctgagcttagtgattttgatttctg
atgttaattaattttaaatcaagttttttgttttttgagaatatatacaa
gtactatgtgcatcatttctcctctcacacccagatccattcattgccac
tcaaattcatgactccccccccccacacacacgcacgcacacacgtgtgg
gcctatgtaccagaggctttccatggagatctatggcctggcctggtgtg
agagttacagcaaagggaaatgagtgtgagcaggaagggaaagtcacttt
cacagcttcactgctgcagtgcctctacctccgcactgccctgcactgaa
tctgtctggctgggccgagaaaggctgaaaagccaactagccatgaggag
tgctctggacttcaggcagggtcaggggatcgaattccttccagtataca
cccttaaacagaagctcttgaagactaa
gaattcttctcagagttctacaagaacaagattagccatatctccgtagt
gtaaataatatatggggtttgatgccattattttactgtaggcaagacaa
aataacataaagaaatcactgggccaggggagtctcaacagagattttga
aactacagcatgaaaagaagaactctttatccagatcatttaccaataag
aaccaattggtatacacagtctattgttagctggacctcatcactagaaa
taaaggattctagaaatagggtctgtaaatggccttttgtagagttggca
ggcacttctctatgggaaatgggtacatttgggtttggggttttggtttt
tttttttcaaagacatctttcaaaatgaattatttatttatttcaatgtt
aagtgtttatttgcctgcgtgtttgtgcacctcttgcatgcagtgttcgt
gaaggccagaagagggcgcaggatccgttggcactggagttaatacatgg
ttgtgagctaccacacagctgcagcaaaccaaagccaggtcttccagcca
agcttccaaccctggaaatggctacatttatgtattagcatccacagatt
gggtggggagggacttacttcgtgaaaactaggattgcttttagaaccag
tactctaggcatgcctccgtcaacctgttctcgagatgagggaatgatgt
aacacttggatttataagacctgttttttaagatgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34355615_34356644
seq2: B6Ng01-023D09.b_45_1064 (reverse)

seq1  CAAGAGCTTCTGTTCTAAGAGCTGTAATACTTGGGAAGAAATCTGCTCCC  50
      |||||||||||||| |||| | ||| |||||  ||||| |||  | ||||
seq2  CAAGAGCTTCTGTT-TAAG-GGTGT-ATACT--GGAAGGAATTCGATCCC  45

seq1  CTGAAACACTGCCTGAAGCTCCAGAGCACTCCTCACTGGCTAGTCGGCCT  100
      |||  || |||||||||| |||||||||||||||| |||||||| ||| |
seq2  CTG--ACCCTGCCTGAAG-TCCAGAGCACTCCTCA-TGGCTAGTTGGCTT  91

seq1  CTCAGCCTCTCATCGGCCCAGCCAGACCAGACTCAGTGCAGGGCAGTGCG  150
       ||||||| || |||||||||||||| |||| ||||||||||||||||||
seq2  TTCAGCCTTTC-TCGGCCCAGCCAGA-CAGATTCAGTGCAGGGCAGTGCG  139

seq1  GAGGTAGAGGCAACTGCAGCAGTGAAGCTGTGAAAGTGACTTCCCCTCCC  200
      ||||||||||| |||||||||||||||||||||||||||||| |||| ||
seq2  GAGGTAGAGGC-ACTGCAGCAGTGAAGCTGTGAAAGTGACTTTCCCTTCC  188

seq1  TGCTCACACTCACTTCCCTTTGCTGTAACTCTCACACCAGGCCAGGCCAT  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGCTCACACTCATTTCCCTTTGCTGTAACTCTCACACCAGGCCAGGCCAT  238

seq1  AGATCTCCATGGAAAGCCTCTGGTACATAGGCCCACACGTGTGTGCGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCCATGGAAAGCCTCTGGTACATAGGCCCACACGTGTGTGCGTGC  288

seq1  GTGTGTGTGGGGGGGGGGAGTCATGAATTTGAGTGGCAATGAATGGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGGGGGGGGGGAGTCATGAATTTGAGTGGCAATGAATGGATCT  338

seq1  GGGTGTGAGAGGAGAAATGATGCACATAGTACTTGTATATATTCTCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAGAGGAGAAATGATGCACATAGTACTTGTATATATTCTCAAAA  388

seq1  A--CAAAAACTTGATTTAAAATTAATTAACATCAGAAATCAAAATCACTA  448
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAACTTGATTTAAAATTAATTAACATCAGAAATCAAAATCACTA  438

seq1  AGCTCAGACTATAGAGGGCACAAGTTATGGCAGACAATATTTAAAGACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGACTATAGAGGGCACAAGTTATGGCAGACAATATTTAAAGACAT  488

seq1  TAGAAAACAATAAAGAAATAAAATTATCTTAGTCAAACAAGACTTAACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACAATAAAGAAATAAAATTATCTTAGTCAAACAAGACTTAACAA  538

seq1  ACCTGAATCTTAATAAAATTATGTTACATTTTATTGTTAATAACTTTTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAATCTTAATAAAATTATGTTACATTTTATTGTTAATAACTTTTAA  588

seq1  GTTTAATTTTAAGATAAATTTTAAGTTACTTTTATTTTGATAACTTTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTTTAAGATAAATTTTAAGTTACTTTTATTTTGATAACTTTTAA  638

seq1  GTTAATTTATTTGGCAGTATGACTTAAAATGGCAATGTAAAAGTTAAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTATTTGGCAGTATGACTTAAAATGGCAATGTAAAAGTTAAAAC  688

seq1  TTGCTAAGTCATCAATCTTACAAATGATACTAAAACTATTTTTAAAACTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAGTCATCAATCTTACAAATGATACTAAAACTATTTTTAAAACTC  738

seq1  TCTAGGCCCCAAGCCCTGTGGAAAACAGGGTAGGAGTGGAAGTAAGTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCCCCAAGCCCTGTGGAAAACAGGGTAGGAGTGGAAGTAAGTGTT  788

seq1  TCTATTTCTGCTTCTTAACCAAAAGTTCTATAACTTTAAAAATCACATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTGCTTCTTAACCAAAAGTTCTATAACTTTAAAAATCACATAA  838

seq1  CTTCCAAACTAAATTAACAGCAATTCAACTCTTTACCATAGCCAAATCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAACTAAATTAACAGCAATTCAACTCTTTACCATAGCCAAATCAG  888

seq1  GGAGTTACGGTAGATATGTGGCAATAATGAATTGAGGTTAGAATAGTCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTACGGTAGATATGTGGCAATAATGAATTGAGGTTAGAATAGTCCT  938

seq1  TTTTTGTTGTTGTTGTTGTTAAAGAATATTGATCAATTACTTAGTATATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTGTTGTTGTTGTTAAAGAATATTGATCAATTACTTAGTATATA  988

seq1  AACAGAAAAGATCACTAGAGCCTGCAGAATTC  1030
      ||||||||||||||||||||||||||||||||
seq2  AACAGAAAAGATCACTAGAGCCTGCAGAATTC  1020

seq1: chr8_34176366_34177106
seq2: B6Ng01-023D09.g_71_809

seq1  GAATTCTTCTCAGAGTTCTACAAGAACAAGATTAGCCATATCTCCGTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCAGAGTTCTACAAGAACAAGATTAGCCATATCTCCGTAGT  50

seq1  GTAAATAATATATGGGGTTTGATGCCATTATTTTACTGTAGGCAAGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAATATATGGGGTTTGATGCCATTATTTTACTGTAGGCAAGACAA  100

seq1  AATAACATAAAGAAATCACTGGGCCAGGGGAGTCTCAACAGAGATTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATAAAGAAATCACTGGGCCAGGGGAGTCTCAACAGAGATTTTGA  150

seq1  AACTACAGCATGAAAAGAAGAACTCTTTATCCAGATCATTTACCAATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGCATGAAAAGAAGAACTCTTTATCCAGATCATTTACCAATAAG  200

seq1  AACCAATTGGTATACACAGTCTATTGTTAGCTGGACCTCATCACTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATTGGTATACACAGTCTATTGTTAGCTGGACCTCATCACTAGAAA  250

seq1  TAAAGGATTCTAGAAATAGGGTCTGTAAATGGCCTTTTGTAGAGTTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATTCTAGAAATAGGGTCTGTAAATGGCCTTTTGTAGAGTTGGCA  300

seq1  GGCACTTCTCTATGGGAAATGGGTACATTTGGGTTTGGGGTTTTGGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTCTCTATGGGAAATGGGTACATTTGGGTTTGGGGTTTTGGTTTT  350

seq1  TTTTTTTCAAAGACATCTTTCAAAATGAATTATTTATTTATTTCAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAAAGACATCTTTCAAAATGAATTATTTATTTATTTCAATGTT  400

seq1  AAGTGTTTATTTGCCTGCGTGTTTGTGCACCTCTTGCATGCAGTGTTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTATTTGCCTGCGTGTTTGTGCACCTCTTGCATGCAGTGTTCGT  450

seq1  GAAGGCCAGAAGAGGGCGCAGGATCCGTTGGCACTGGAGTTAATACATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCAGAAGAGGGCGCAGGATCCGTTGGCACTGGAGTTAATACATGG  500

seq1  TTGTGAGCTACCACACAGCTGCAGCAAACCAAAGCCAGGTCTTCCAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCTACCACACAGCTGCAGCAAACCAAAGCCAGGTCTTCCAGCCA  550

seq1  AGCTTCCAACCCTGGAAATGGCTACATTTATGTATTAGCATCCACAGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAACCCTGGAAATGGCTACATTTATGTATTAGCATCCACAGATT  600

seq1  GGGTGGGGAGGGACTTACCTCGTGAAGACTAGGACTGCTTTGAGAACCAG  650
      |||||||||||||||||| ||||||| ||||||| |||||| ||||||||
seq2  GGGTGGGGAGGGACTTACTTCGTGAAAACTAGGATTGCTTTTAGAACCAG  650

seq1  TACTCTAGGCACTGCCTCCGTCAACCTGTCTCTCGAGATGAGGGAATGAT  700
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TACTCTAGGCA-TGCCTCCGTCAACCTGT-TCTCGAGATGAGGGAATGAT  698

seq1  GTAACACTTGGATTTAACAGACCTGTCTCTAAAGATGAGGG  741
      ||||||||||||||||  |||||||| | | ||||||||||
seq2  GTAACACTTGGATTTATAAGACCTGTTTTTTAAGATGAGGG  739