BAC Information

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BAC

Clone NameB6Ng01-024I11
Chromosome8 (Build37)
Map Location 65,661,485 - 65,662,477
singlet/doubletsinglet
Overlap geneSpock3
Upstream geneLOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneLOC384831, EG244495, Tll1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024I11.bB6Ng01-024I11.g
ACCDH856134DH856135
length1,103989
definitionDH856134|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I11, 5' end.DH856135|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatgcaaaatggagatcctaaatcctttaaggtctcaaacaga
gaagaaaatagcaattactctgccttcaatgtctattgaacatcatgaaa
atactgtcaatacgggacgcttgtgtctaagcccatcacacaactggtat
gaacttggaactgcatccaagttcaactggacattgcctttaccacattc
cacccttgcatttcctttactctcacattccacccttcctcatagtaaaa
gctaatttcagggtttacagcccaatgacctgtgttctccaattaaaggt
agatgccatattcttcaggaggggatgacatagataaaggagagctctgc
agtgcaatggctgcattcttactttgaggcctacaagtcgtacagggatt
ttggaaataatgttgctaatataacaggaggcaaaagcccatttaatttg
gttgtcttactttatgaattatgcttctataaaaccgatctatttttgaa
gtaacttatattaaaaagaatgcttactgctgtcagtatgtggtaaccta
gagatttatccatcaataaaaggggggaaaatgttgactttagacttctt
tgttaattcattctatgttgcatgtaaattatttgttacagatttgacac
aactgacttctttcatctttcatttgctggttgagtgtatggaataaaaa
tgtggagattttgaaaatattctcttcatactgttaattttagaaaactt
tataaaaatgaataattttccccctactgacagtccttgacttggttagt
aacttagacagctctaggttgttctctagaaaactacctgttgacaagaa
aacaagacaggctctgtctctgagagaatttttaaattgaatatttataa
ttatttctttgggggataacacttcgaattaattgtttcttttacagcct
gatacttaaataaattcttggaaactaataacagtctgatgtaaattata
tataatttcacatttcaaatgcttggtcatttagtaacagccctattttt
ttaatttcccatccggaattattgtgaacctgacataatgagaattctgg
gtc
gaattcactgggtgttcatttgtgatgcaagcctttaattccagcactta
gaaggcagagccaggcagatccctgtgagtgggagtttgcggccaacctg
gtctgcacagcgagttccaggacactcaaagcaagacagacacaaagaca
atctaatgaacaaacaaaatggagctattggttctggggaagaataaact
aaagaaaggaaaacttgaaatcacataagttacattgtactacagaaaaa
taacatgaggagaacacagaaacaattatgtaaatatcatctacttattt
tgagtttcgatccttcctaagtttctcctttcaggccgtgcccttgtgcc
tttattgtttgcatgttactctacatagcgtgttctgacccactatataa
tgtgtttttcaattagaacaaagaggcacaaagatcattttgctccaggg
aaagagcaaggatgctaagaataattttgaatcttggagaacatttagaa
atagcgtgatttgttcccaattctaaggaggggcatagtgtccacacttc
agtcttcattcttcttgagtttcatgtgtttagcaaattgtatcttatat
cttgggtatcctaggtttggggctaatatccacttatcagtgagtacata
ttgtgtgagttcctttgtgaatgtgttacctcactcaggatgatgccctc
caggtccatccatttgcctaggaatttcataaattcattctttttaatag
ctgagtagtactccattgtgtagatgtaccacattttctgtatccaaaac
acccatggaaggagttacaaagacaaagtttggagctgagatgaaaggat
ggaccatgtagagactgccatatccagggatccaccccataatcagcatc
caaacgctgacacattgcatatactagcaagatttatcgaaggacccaaa
tgtagctgtctcttgtgagactatgccgggcctagcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65661485_65662477
seq2: B6Ng01-024I11.g_68_1056

seq1  GAATTCACTGGGTGTTCATTTGTGATGCAAGCCTTTAATTCCAGCACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGGTGTTCATTTGTGATGCAAGCCTTTAATTCCAGCACTTA  50

seq1  GAAGGCAGAGCCAGGCAGATCCCTGTGAGTGGGAGTTTGCGGCCAACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGAGCCAGGCAGATCCCTGTGAGTGGGAGTTTGCGGCCAACCTG  100

seq1  GTCTGCACAGCGAGTTCCAGGACACTCAAAGCAAGACAGACACAAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCACAGCGAGTTCCAGGACACTCAAAGCAAGACAGACACAAAGACA  150

seq1  ATCTAATGAACAAACAAAATGGAGCTATTGGTTCTGGGGAAGAATAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGAACAAACAAAATGGAGCTATTGGTTCTGGGGAAGAATAAACT  200

seq1  AAAGAAAGGAAAACTTGAAATCACATAAGTTACATTGTACTACAGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGGAAAACTTGAAATCACATAAGTTACATTGTACTACAGAAAAA  250

seq1  TAACATGAGGAGAACACAGAAACAATTATGTAAATATCATCTACTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGAGGAGAACACAGAAACAATTATGTAAATATCATCTACTTATTT  300

seq1  TGAGTTTCGATCCTTCCTAAGTTTCTCCTTTCAGGCCGTGCCCTTGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCGATCCTTCCTAAGTTTCTCCTTTCAGGCCGTGCCCTTGTGCC  350

seq1  TTTATTGTTTGCATGTTACTCTACATAGCGTGTTCTGACCCACTATATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTTGCATGTTACTCTACATAGCGTGTTCTGACCCACTATATAA  400

seq1  TGTGTTTTTCAATTAGAACAAAGAGGCACAAAGATCATTTTGCTCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTCAATTAGAACAAAGAGGCACAAAGATCATTTTGCTCCAGGG  450

seq1  AAAGAGCAAGGATGCTAAGAATAATTTTGAATCTTGGAGAACATTTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAAGGATGCTAAGAATAATTTTGAATCTTGGAGAACATTTAGAA  500

seq1  ATAGCGTGATTTGTTCCCAATTCTAAGGAGGGGCATAGTGTCCACACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGTGATTTGTTCCCAATTCTAAGGAGGGGCATAGTGTCCACACTTC  550

seq1  AGTCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAATTGTATCTTATAT  600

seq1  CTTGGGTATCCTAGGTTTGGGGCTAATATCCACTTATCAGTGAGTACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTATCCTAGGTTTGGGGCTAATATCCACTTATCAGTGAGTACATA  650

seq1  TTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTC  700

seq1  CAGGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAG  750

seq1  CTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTATCCAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTATCCAAAAC  800

seq1  ACCCATGGAAGGAGTTACAAAGACAAAGTTTGGAGCTGAGATGAAAGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGAAGGAGTTACAAAGACAAAGTTTGGAGCTGAGATGAAAGGAT  850

seq1  GGACCATGTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATGTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCATC  900

seq1  CAAACGCTGACACCATTGCATATACTAGCAAGATTTTATCGAAAGGACCC  950
      |||||||||||| |||||||||||||||||||| ||||||| ||||||||
seq2  CAAACGCTGACA-CATTGCATATACTAGCAAGA-TTTATCG-AAGGACCC  947

seq1  AGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAA  993
      | |||||||||||||||||||||||||||| ||||||||||||
seq2  AAATGTAGCTGTCTCTTGTGAGACTATGCC-GGGCCTAGCAAA  989