BAC Information

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BAC

Clone NameB6Ng01-024K05
Chromosome8 (Build37)
Map Location 85,430,768 - 85,592,077
singlet/doubletdoublet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024K05.bB6Ng01-024K05.g
ACCDH856212DH856213
length1,039932
definitionDH856212|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K05, 5' end.DH856213|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,430,768 - 85,431,831)(85,591,144 - 85,592,077)
sequence
gaattcaggaaaaacctcaatgccccaaacagagggcattgatggggctc
tcctctgccagcttcagccccaacacaccttctcaatatccagtgaagcc
ttctgggattttaaccagaagaaggtgagagaaaagactatctgctttaa
cttattgagatgccttgttggccaggagaaaattcctatcatattttgta
attttccccacatagacccagaggatgatcacacacagcacatctactgg
ttacacaagatttctctttgacaggataaattccattcataccttttata
cagtcttcaccttcccaccatgatcaaagtttttaaaacactgagctcag
accgttgtgtcttggaattcagatttctgtaaaaacatgattcttttcct
gagactgctgctggcaacaactgattggggtttgtttcttttgttgcaaa
gctgttgcaagaaaacaccaaggacttcataatttccagaaacaacttaa
ccttggaggccagaggaatagagcaacaccctaagcagagacagagacac
agaacacggctgcaagcaagtccatccctggcctagctccccatggcccc
ggagtgttagtcactttctgtatggtatcagcttaggtggccaaagcctc
tgtggaagcacatgtccttacatggcaaggacagtgtggctggacattca
gacagaaagtggacaggtagggaaaccaaagtcttcctcgagtgatacta
aacagtagagtttgtttttctggctctgttttggtttctagagccacaag
aacttcctctagagaccttactcctttatatctgtacaattattgctcac
cctgactttttaatcccaactgaagttattctgtggggcatctcagttaa
ttggatgttactccttgaaaccatcacttggctgtgcctcttgactcatg
tacgaagaagctttgatacattaaattggctccattccaaccggagaatt
tttcctgactgtgcttctgttacctatcaactctagcct
gaattcctccttttggcaacttaatcatggcgtttttaccatgcaacaga
aggacaggtataattatagtttcttcggttctcattagtctttgacagag
cacagagtgaaatttaccgaacgtttctgttgtcagtagctacttcacaa
tccccagctagttttcaaccacagagggacaacttaagcattaaatacca
agcatttgctggtggacgtttctcaggacatgtgagcttgattggaacac
aaagagcatgggaaagttaaagctgtcagaggcggcagcctcatgggcag
aattgtgtgggtttatttcacaactatataataatggctatagatcgcat
ttgttcagcgattaaaatacttaattgcccactcattcaacagacatttg
ttggatgtcactaggcatacaacacttaaggtaaatgttgtggaggatat
aaatttggccctgcctctaacttaaatttgacccagtagaagaaataaat
aaatattataataaatggtatattgatatataatataataatatatgcat
atacacatatagatatgtacatttaacacaagagaatgcacgttaaagga
taggtataactaaagattaaagaagtaattgggagggtaacttttcatct
tcaaccagataaccaagaggactgactcatggagtagattggctctgcac
ctgtggtaaggatctaagaagtcctgggaagtatggggacaaagacaaat
gttggttctttcaagagaatcactaccacgcaaagcaactggtaaatttc
aggcacgagtgtgtctggctttgtttgatttatttagaaaatatgactaa
taagatatggtgcatatatcaagtataggtgctttaccatttctgtcttc
tttagggtctcttctatttcatgatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85430768_85431831
seq2: B6Ng01-024K05.b_36_1074

seq1  GAATTCAGGAAAAACCTCAATGCCCCAAACAGAGGGCATTGATGGGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAAAACCTCAATGCCCCAAACAGAGGGCATTGATGGGGCTC  50

seq1  TCCTCTGCCAGCTTCAGCCCCAACACACCTTCTCAATATCCAGTGAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCCAGCTTCAGCCCCAACACACCTTCTCAATATCCAGTGAAGCC  100

seq1  TTCTGGGATTTTAACCAGAAGAAGGTGAGAGAAAAGACTATCTGCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGATTTTAACCAGAAGAAGGTGAGAGAAAAGACTATCTGCTTTAA  150

seq1  CTTATTGAGATGCCTTGTTGGCCAGGAGAAAATTCCTATCATATTTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGAGATGCCTTGTTGGCCAGGAGAAAATTCCTATCATATTTTGTA  200

seq1  ATTTTCCCCACATAGACCCAGAGGATGATCACACACAGCACATCTACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCCACATAGACCCAGAGGATGATCACACACAGCACATCTACTGG  250

seq1  TTACACAAGATTTCTCTTTGACAGGATAAATTCCATTCATACCTTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAAGATTTCTCTTTGACAGGATAAATTCCATTCATACCTTTTATA  300

seq1  CAGTCTTCACCTTCCCACCATGATCAAAGTTTTTAAAACACTGAGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCACCTTCCCACCATGATCAAAGTTTTTAAAACACTGAGCTCAG  350

seq1  ACCGTTGTGTCTTGGAATTCAGATTTCTGTAAAAACATGATTCTTTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTGTGTCTTGGAATTCAGATTTCTGTAAAAACATGATTCTTTTCCT  400

seq1  GAGACTGCTGCTGGCAACAACTGATTGGGGTTTGTTTCTTTTGTTGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGCTGCTGGCAACAACTGATTGGGGTTTGTTTCTTTTGTTGCAAA  450

seq1  GCTGTTGCAAGAAAACACCAAGGACTTCATAATTTCCAGAAACAACTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGCAAGAAAACACCAAGGACTTCATAATTTCCAGAAACAACTTAA  500

seq1  CCTTGGAGGCCAGAGGAATAGAGCAACACCCTAAGCAGAGACAGAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGGCCAGAGGAATAGAGCAACACCCTAAGCAGAGACAGAGACAC  550

seq1  AGAACACGGCTGCAAGCAAGTCCATCCCTGGCCTAGCTCCCCATGGCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACGGCTGCAAGCAAGTCCATCCCTGGCCTAGCTCCCCATGGCCCC  600

seq1  GGAGTGTTAGTCACTTTCTGTATGGTATCAGCTTAGGTGGCCAAAGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTTAGTCACTTTCTGTATGGTATCAGCTTAGGTGGCCAAAGCCTC  650

seq1  TGTGGAAGCACATGTCCTTACATGGCAAGGACAGTGTGGCTGGACATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGCACATGTCCTTACATGGCAAGGACAGTGTGGCTGGACATTCA  700

seq1  GACAGAAAGTGGACAGGTAGGGAAACCAAAGTCTTCCTCGAGTGAGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACAGAAAGTGGACAGGTAGGGAAACCAAAGTCTTCCTCGAGTGATACTA  750

seq1  AACAGTAGAGTTTGTTTTTCTTGGCTCTGTTTTGGTTTCTAGAGCCACAA  800
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AACAGTAGAGTTTGTTTTTC-TGGCTCTGTTTTGGTTTCTAGAGCCACAA  799

seq1  GAACTTCCTCTAGAGACCTTACTCCTTTATAATCTGTACAATTAATTGCT  850
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  GAACTTCCTCTAGAGACCTTACTCCTTTAT-ATCTGTACAATT-ATTGCT  847

seq1  CAACCTTGACTTTTTAAATTCCCATCTGAAGTTTAATTTCTTGTGGGTGT  900
      | ||| |||||||||||  ||||| ||||||||  |||   |||||  | 
seq2  C-ACCCTGACTTTTTAA--TCCCAACTGAAGTT--ATT--CTGTGG--GG  888

seq1  CATCTCAGTTTAAATGGATGTCACTCCTTGAAACCCATCACTGGGCTGTG  950
      |||||||| |||| ||||||| ||||||||||| |||||||| |||||||
seq2  CATCTCAG-TTAATTGGATGTTACTCCTTGAAA-CCATCACTTGGCTGTG  936

seq1  CTTCTTGACCTCCATGTAAACAGAAGAAAGCTTTGTGAATACATCAAATT  1000
      | |||||||   ||||||    |||| ||||||||   |||||| |||||
seq2  CCTCTTGAC--TCATGTA---CGAAG-AAGCTTTG---ATACATTAAATT  977

seq1  GGCCCCATTCCAAACTGGAGAAATTTTTCCTGACCTGTGGCTTTCCTGGT  1050
      ||| ||||||| ||| |||| |||||||||||| |||| ||||  || ||
seq2  GGCTCCATTCC-AACCGGAG-AATTTTTCCTGA-CTGT-GCTT--CT-GT  1020

seq1  TACCTA-----GCTAGCCT  1064
      ||||||      |||||||
seq2  TACCTATCAACTCTAGCCT  1039

seq1: chr8_85591144_85592077
seq2: B6Ng01-024K05.g_68_999 (reverse)

seq1  CACACACATCATGAAATAGAAGAGACCCTAAAGAAGACAGAAATGGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATCATGAAATAGAAGAGACCCTAAAGAAGACAGAAATGGTAAA  50

seq1  GCACCTATACTTGATATATGCACCATATCTTATTAGTCATATTTTTCTAA  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCACCTATACTTGATATATGCACCATATCTTATTAGTCATA-TTTTCTAA  99

seq1  ATAAATCAAACAAAGCCAGACACACTCGTGCCCTGAAATTTACCAGTTGC  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAAATCAAACAAAGCCAGACACACTCGTG-CCTGAAATTTACCAGTTGC  148

seq1  TTTGCGTGGTAGTGATTCTCTTGAAAGAACCAACATTTGTCTTTGTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGTGGTAGTGATTCTCTTGAAAGAACCAACATTTGTCTTTGTCCCC  198

seq1  ATACTTCCCAGGACTTCTTAGATCCTTACCACAGGTGCAGAGCCAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCCAGGACTTCTTAGATCCTTACCACAGGTGCAGAGCCAATCTA  248

seq1  CTCCATGAGTCAGTCCTCTTGGTTATCTGGTTGAAGATGAAAAGTTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGAGTCAGTCCTCTTGGTTATCTGGTTGAAGATGAAAAGTTACCC  298

seq1  TCCCAATTACTTCTTTAATCTTTAGTTATACCTATCCTTTAACGTGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTACTTCTTTAATCTTTAGTTATACCTATCCTTTAACGTGCATT  348

seq1  CTCTTGTGTTAAATGTACATATCTATATGTGTATATGCATATATTATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTGTTAAATGTACATATCTATATGTGTATATGCATATATTATTAT  398

seq1  ATTATATATCAATATACCATTTATTATAATATTTATTTATTTCTTCTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATCAATATACCATTTATTATAATATTTATTTATTTCTTCTACT  448

seq1  GGGTCAAATTTAAGTTAGAGGCAGGGCCAAATTTATATCCTCCACAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAATTTAAGTTAGAGGCAGGGCCAAATTTATATCCTCCACAACAT  498

seq1  TTACCTTAAGTGTTGTATGCCTAGTGACATCCAACAAATGTCTGTTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTAAGTGTTGTATGCCTAGTGACATCCAACAAATGTCTGTTGAAT  548

seq1  GAGTGGGCAATTAAGTATTTTAATCGCTGAACAAATGCGATCTATAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGCAATTAAGTATTTTAATCGCTGAACAAATGCGATCTATAGCCA  598

seq1  TTATTATATAGTTGTGAAATAAACCCACACAATTCTGCCCATGAGGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATAGTTGTGAAATAAACCCACACAATTCTGCCCATGAGGCTGC  648

seq1  CGCCTCTGACAGCTTTAACTTTCCCATGCTCTTTGTGTTCCAATCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTGACAGCTTTAACTTTCCCATGCTCTTTGTGTTCCAATCAAGCT  698

seq1  CACATGTCCTGAGAAACGTCCACCAGCAAATGCTTGGTATTTAATGCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTCCTGAGAAACGTCCACCAGCAAATGCTTGGTATTTAATGCTTA  748

seq1  AGTTGTCCCTCTGTGGTTGAAAACTAGCTGGGGATTGTGAAGTAGCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCCTCTGTGGTTGAAAACTAGCTGGGGATTGTGAAGTAGCTACT  798

seq1  GACAACAGAAACGTTCGGTAAATTTCACTCTGTGCTCTGTCAAAGACTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAGAAACGTTCGGTAAATTTCACTCTGTGCTCTGTCAAAGACTAA  848

seq1  TGAGAACCGAAGAAACTATAATTATACCTGTCCTTCTGTTGCATGGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACCGAAGAAACTATAATTATACCTGTCCTTCTGTTGCATGGTAAA  898

seq1  AACGCCATGATTAAGTTGCCAAAAGGAGGAATTC  934
      ||||||||||||||||||||||||||||||||||
seq2  AACGCCATGATTAAGTTGCCAAAAGGAGGAATTC  932